; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012711 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012711
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein SHI RELATED SEQUENCE 1-like
Genome locationscaffold63:2869524..2870454
RNA-Seq ExpressionMS012711
SyntenyMS012711
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031235.1 Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-9570.21Show/hide
Query:  MAGFFQLGGGTGPS-QLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR-GGGQVISCQDCGNQAKKDC
        MAGF+ LGGG  P+  LPTT +T  DGLFWY+N +ESLE+WQQQQ           G G V SGDESPPRSSLVM+RSGR GGGQVISCQDCGNQAKKDC
Subjt:  MAGFFQLGGGTGPS-QLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR-GGGQVISCQDCGNQAKKDC

Query:  LHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGH
        LHMRCRTCCKSRGFDCETHVKSTW+PASKRR+R LRS  TN KR RD+T       SGLEMGNFP EVSS+AVFRCVRMT LDET +Q+AYQTAVNIGGH
Subjt:  LHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGH

Query:  IFKGILYDHGPEQ---------PNSSA------VSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS
         FKGILYDHGPEQ         PNS++      + TAP       E PPISAALLDPPPPYP PLN Y+ AAGTQFFLPPTS
Subjt:  IFKGILYDHGPEQ---------PNSSA------VSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS

XP_022942307.1 protein SHORT INTERNODES-like [Cucurbita moschata]1.1e-9370.11Show/hide
Query:  MAGFFQLGGGTGPS-QLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR-GGGQVISCQDCGNQAKKDC
        MAGFF LGGG  P+  LPTT +T  DGLFWY+N +ESL +WQQQQ           G G V SGDESPPRSSLVM+RSGR GGGQVISCQDCGNQAKKDC
Subjt:  MAGFFQLGGGTGPS-QLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR-GGGQVISCQDCGNQAKKDC

Query:  LHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGH
        LHMRCRTCCKSRGFDCETHVKSTW+PASKRR+R LRS  TN KR RD+T       SGLEM NFP EVSS+AVFRCVRMT LDET +Q+AYQTAVNIGGH
Subjt:  LHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGH

Query:  IFKGILYDHGPEQ--------PNSSA------VSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS
         FKGILYDHGPEQ        PNS++      + TAP       E PPISAALLDPPPPYP PLN Y+ AAGTQFFLPPTS
Subjt:  IFKGILYDHGPEQ--------PNSSA------VSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS

XP_022982329.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima]2.5e-9370.71Show/hide
Query:  MAGFFQLGGGTGPS-QLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR-GGGQVISCQDCGNQAKKDC
        MAGFF LGGG  P+  LPTT +T  DGLFWY+N +ESL +WQQQQ           G G V SGDESPPRSSLVM+RSGR GGGQVISCQDCGNQAKKDC
Subjt:  MAGFFQLGGGTGPS-QLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR-GGGQVISCQDCGNQAKKDC

Query:  LHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGH
        LHMRCRTCCKSRGFDCETHVKSTW+PASKRR+R LRS  TN KR RD+T       SGLEMGNFP EVSS+AVFRCVRMT LDET +Q+AYQTAVNIGGH
Subjt:  LHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGH

Query:  IFKGILYDHGPEQ-------PNSSA------VSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS
         FKGILYDHGPEQ       PNS++      + TAP       E PPISAALLDPPPPYP PLN Y+ AAGTQFFLPPTS
Subjt:  IFKGILYDHGPEQ-------PNSSA------VSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS

XP_023552309.1 protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo]1.4e-9168.9Show/hide
Query:  MAGFFQLGGGTGPS-QLPTTASTA-ADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR-GGGQVISCQDCGNQAKKD
        MAGF+ LGGG  P+  LPTT +T   DGLFWY+N +ESL +WQQQQ           G G V SGDESPPRSSLVM+RSGR GGGQVISCQDCGNQAKKD
Subjt:  MAGFFQLGGGTGPS-QLPTTASTA-ADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR-GGGQVISCQDCGNQAKKD

Query:  CLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGG
        CLHMRCRTCCKSRGFDCETHVKSTW+PASKRR+R LRS  TN KR RD+T       SGLEMGN P EVSS+AVFRCVRMT LDET +Q+AYQTAVNIGG
Subjt:  CLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGG

Query:  HIFKGILYDHGPEQ---------PNSSA------VSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS
        H FKGILYDHGPEQ         PNS++      + TAP       E PPIS ALLDPPPPYP PLN Y+ AAGTQFFLPPTS
Subjt:  HIFKGILYDHGPEQ---------PNSSA------VSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS

XP_023552316.1 protein SHI RELATED SEQUENCE 1-like isoform X2 [Cucurbita pepo subsp. pepo]4.4e-9068.2Show/hide
Query:  MAGFFQLGGGTGPS-QLPTTASTA-ADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR-GGGQVISCQDCGNQAKKD
        MAGF+ LGGG  P+  LPTT +T   DGLFWY+N +ESL +WQQQQ           G G V SGDESPPRSSLVM+RSGR GGGQVISCQDCGNQAKKD
Subjt:  MAGFFQLGGGTGPS-QLPTTASTA-ADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR-GGGQVISCQDCGNQAKKD

Query:  CLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGG
        CLHMRCRTCCKSRGFDCETHVKSTW+PASKRR+R LRS  TN KR RD+T + S      EMGN P EVSS+AVFRCVRMT LDET +Q+AYQTAVNIGG
Subjt:  CLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGG

Query:  HIFKGILYDHGPEQ---------PNSSA------VSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS
        H FKGILYDHGPEQ         PNS++      + TAP       E PPIS ALLDPPPPYP PLN Y+ AAGTQFFLPPTS
Subjt:  HIFKGILYDHGPEQ---------PNSSA------VSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KUG2 Uncharacterized protein6.5e-7962.46Show/hide
Query:  MAGFFQLGGGTGPSQLPT----TAST-------AADGLFWYKNHHESLEVW-----QQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR----G
        MAGFF L GG    ++P     T +T         +GLFWYKN +E LE W     QQQQ+          G G V SGDESP RSSLVMVRSGR    G
Subjt:  MAGFFQLGGGTGPSQLPT----TAST-------AADGLFWYKNHHESLEVW-----QQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR----G

Query:  GGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTAL
        GG V SCQDCGNQAKKDC+HMRCRTCCKSRGF+CETHVKSTW+PASKRRDR LRS   N KR +D    P++  SGL+MGNFP EV++ AVFRCVRMT+L
Subjt:  GGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTAL

Query:  DETEEQYAYQTAVNIGGHIFKGILYDHGPEQPNSSAVSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS
        DET++QYAYQTAVNIGG IFKGILYDHGPEQP        P P+ +       SAALLDP PPYPTPL+ YI  AGTQFFLPP+S
Subjt:  DETEEQYAYQTAVNIGGHIFKGILYDHGPEQPNSSAVSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS

A0A1S3CNX3 protein SHI RELATED SEQUENCE 1-like2.7e-7760.99Show/hide
Query:  MAGFFQLGGGTGPSQLPT----TAST-------AADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG---VSSGDESPPRSSLVMVRSGRGGGQ----
        MAGFF L GG    ++P     T +T         +GLFWYKN +E LE W+ ++E       +    G   V SGDESP RSSLVMVRSGRGGG     
Subjt:  MAGFFQLGGGTGPSQLPT----TAST-------AADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG---VSSGDESPPRSSLVMVRSGRGGGQ----

Query:  VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDET
        V SCQDCGNQAKKDC HMRCRTCCKSRGF+CETHVKSTW+PASKRRDR LRS   N KR +D    P++  SGL+M NFP EV++ AVFRCVRMT LDET
Subjt:  VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDET

Query:  EEQYAYQTAVNIGGHIFKGILYDHGPEQPNSSAVSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS
        ++QYAYQTAVNIGGHIFKGILYDHGPEQP        P P+ +       +AALLD  PPYPTPL+ YI  AGTQFFLPP+S
Subjt:  EEQYAYQTAVNIGGHIFKGILYDHGPEQPNSSAVSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS

A0A5A7TNR6 Protein SHI RELATED SEQUENCE 1-like2.7e-7760.99Show/hide
Query:  MAGFFQLGGGTGPSQLPT----TAST-------AADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG---VSSGDESPPRSSLVMVRSGRGGGQ----
        MAGFF L GG    ++P     T +T         +GLFWYKN +E LE W+ ++E       +    G   V SGDESP RSSLVMVRSGRGGG     
Subjt:  MAGFFQLGGGTGPSQLPT----TAST-------AADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG---VSSGDESPPRSSLVMVRSGRGGGQ----

Query:  VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDET
        V SCQDCGNQAKKDC HMRCRTCCKSRGF+CETHVKSTW+PASKRRDR LRS   N KR +D    P++  SGL+M NFP EV++ AVFRCVRMT LDET
Subjt:  VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDET

Query:  EEQYAYQTAVNIGGHIFKGILYDHGPEQPNSSAVSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS
        ++QYAYQTAVNIGGHIFKGILYDHGPEQP        P P+ +       +AALLD  PPYPTPL+ YI  AGTQFFLPP+S
Subjt:  EEQYAYQTAVNIGGHIFKGILYDHGPEQPNSSAVSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS

A0A6J1FUH1 protein SHORT INTERNODES-like5.5e-9470.11Show/hide
Query:  MAGFFQLGGGTGPS-QLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR-GGGQVISCQDCGNQAKKDC
        MAGFF LGGG  P+  LPTT +T  DGLFWY+N +ESL +WQQQQ           G G V SGDESPPRSSLVM+RSGR GGGQVISCQDCGNQAKKDC
Subjt:  MAGFFQLGGGTGPS-QLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR-GGGQVISCQDCGNQAKKDC

Query:  LHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGH
        LHMRCRTCCKSRGFDCETHVKSTW+PASKRR+R LRS  TN KR RD+T       SGLEM NFP EVSS+AVFRCVRMT LDET +Q+AYQTAVNIGGH
Subjt:  LHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGH

Query:  IFKGILYDHGPEQ--------PNSSA------VSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS
         FKGILYDHGPEQ        PNS++      + TAP       E PPISAALLDPPPPYP PLN Y+ AAGTQFFLPPTS
Subjt:  IFKGILYDHGPEQ--------PNSSA------VSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS

A0A6J1J480 protein SHI RELATED SEQUENCE 1-like1.2e-9370.71Show/hide
Query:  MAGFFQLGGGTGPS-QLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR-GGGQVISCQDCGNQAKKDC
        MAGFF LGGG  P+  LPTT +T  DGLFWY+N +ESL +WQQQQ           G G V SGDESPPRSSLVM+RSGR GGGQVISCQDCGNQAKKDC
Subjt:  MAGFFQLGGGTGPS-QLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPG-VSSGDESPPRSSLVMVRSGR-GGGQVISCQDCGNQAKKDC

Query:  LHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGH
        LHMRCRTCCKSRGFDCETHVKSTW+PASKRR+R LRS  TN KR RD+T       SGLEMGNFP EVSS+AVFRCVRMT LDET +Q+AYQTAVNIGGH
Subjt:  LHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRS-LTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGH

Query:  IFKGILYDHGPEQ-------PNSSA------VSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS
         FKGILYDHGPEQ       PNS++      + TAP       E PPISAALLDPPPPYP PLN Y+ AAGTQFFLPPTS
Subjt:  IFKGILYDHGPEQ-------PNSSA------VSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 11.4e-4939.61Show/hide
Query:  MAGFFQLGGGTGPSQLPTTAS-----TAADGLFWYKNHH-------------ESLEVWQ-----------QQQEGGFVN--------YSSVVGPGV----
        MA FF LGG         ++S     T ++  F Y+N H             +  E+WQ            QQ+  F +        YS+ VG GV    
Subjt:  MAGFFQLGGGTGPSQLPTTAS-----TAADGLFWYKNHH-------------ESLEVWQ-----------QQQEGGFVN--------YSSVVGPGV----

Query:  -----SSGDESPPRSSLVMVRSGRGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDR--QLRSLTNP-------------K
             S+GD    RS  VM+RSG GG   ISCQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTW+PA+KRR+R  QL +L                K
Subjt:  -----SSGDESPPRSSLVMVRSGRGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDR--QLRSLTNP-------------K

Query:  RLRDDTNSPS----TLPS---GLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGHIFKGILYDHGPEQP----------------------
        R R+D ++ S     LPS   GLE+G FP++V +SAVF+C++M+++++ E+Q AYQ AV+IGGH+FKGILYD G E                        
Subjt:  RLRDDTNSPS----TLPS---GLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGHIFKGILYDHGPEQP----------------------

Query:  ---NSSAVSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS
           NS+AV+TA   +G   +      +    P  +P PL+ ++  AGTQFF P  S
Subjt:  ---NSSAVSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS

O65517 Protein SHI RELATED SEQUENCE 29.4e-4340.88Show/hide
Query:  MAGFFQLGGGTGPS--QLPTTASTAADGLFWYK--------NHHESLEVWQQQQEGGFVNYSSVVGPGVSSGDESPPRSSLVMVRSGRGGGQVISCQDCG
        MAG F LGG    +  +             WY+        N   S +VWQ   E   +++ S   P   S D  P     V   +       ISC+DCG
Subjt:  MAGFFQLGGGTGPS--QLPTTASTAADGLFWYK--------NHHESLEVWQQQQEGGFVNYSSVVGPGVSSGDESPPRSSLVMVRSGRGGGQVISCQDCG

Query:  NQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDR--QLRSLTN------------------PKRLRD----DTNSPSTLPS---GLEMG--NFP
        NQAKKDC HMRCRTCCKSRGFDC THV+STWIP ++RR+R  QL   T+                  PKR RD     T+S S LPS   GLEMG  +FP
Subjt:  NQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDR--QLRSLTN------------------PKRLRD----DTNSPSTLPS---GLEMG--NFP

Query:  AEVSSSAVFRCVRMTALDE-TEEQYAYQTAVNIGGHIFKGILYDHGPEQP-------NSSAVSTAPIPAGAVHEF-PPI---------SAALLDPPPPYP
         EVSS A+FRCV+M+ +D+  + QYAYQT VNIGGH+FKGILYD GPE          S   S++    G  H F PP+         SA  +D     P
Subjt:  AEVSSSAVFRCVRMTALDE-TEEQYAYQTAVNIGGHIFKGILYDHGPEQP-------NSSAVSTAPIPAGAVHEF-PPI---------SAALLDPPPPYP

Query:  TPLNAYIAAAGTQFFLPP
             Y +   T  F+PP
Subjt:  TPLNAYIAAAGTQFFLPP

Q9LQZ5 Protein SHI RELATED SEQUENCE 56.5e-4439.66Show/hide
Query:  MAGFFQLGGGTGPSQLPTTASTAADG----------LFWYK----NHHESLEVW-------------QQQQE-----GGFVNYSSVVGPGVSSGDESPPR
        MAGFF LGG    S          D           L+ YK    N+++  E+W             QQQQ+       F ++  V     S+ + +  R
Subjt:  MAGFFQLGGGTGPSQLPTTASTAADG----------LFWYK----NHHESLEVW-------------QQQQE-----GGFVNYSSVVGPGVSSGDESPPR

Query:  SSLVMVRSGR--GGGQV-----ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDR--QLRSL----------TNPKRLRD----DT
        S    V S    GG  V     ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTW+PA+KRR+R  QL SL           N KRLR+    D 
Subjt:  SSLVMVRSGR--GGGQV-----ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDR--QLRSL----------TNPKRLRD----DT

Query:  NSP------------------STLPSGLEMG-NFPAEVSSSAVFRCVRMTAL--DETEEQYAYQTAVNIGGHIFKGILYDHGPEQPN-------SSAVST
        N                    +   SGLE+  + P EV+S A+FRCVR++++  DE ++ YAYQTAVNIGGHIFKGILYD GPE  +       +S  +T
Subjt:  NSP------------------STLPSGLEMG-NFPAEVSSSAVFRCVRMTAL--DETEEQYAYQTAVNIGGHIFKGILYDHGPEQPN-------SSAVST

Query:  APIPAGAVHEFP--PISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS
          +   A         +  +LDP   YP  LN++I  AGT FF PP S
Subjt:  APIPAGAVHEFP--PISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS

Q9SD40 Protein SHI RELATED SEQUENCE 11.7e-5243.31Show/hide
Query:  PTTASTAADGLFWYKNHHESLEVWQQQQEGGFVN-YSSVVGPGVS---------SGDESPP----RSSLVMVRSGRGGGQV--ISCQDCGNQAKKDCLHM
        P++++ A   L  ++NH++   ++Q QQ    ++ YSS  G GV          SG+ S       ++++M+RSG  GG    +SCQDCGNQAKKDC HM
Subjt:  PTTASTAADGLFWYKNHHESLEVWQQQQEGGFVN-YSSVVGPGVS---------SGDESPP----RSSLVMVRSGRGGGQV--ISCQDCGNQAKKDCLHM

Query:  RCRTCCKSRGFDCETHVKSTWIPASKRRDRQL------------RSLTNPKRLRDDTNSPST------LP--SGLEMGNFPAEVSSSAVFRCVRMTALDE
        RCRTCCKSRGF+C THV+STW+PA+KRR+RQ             R  + PKR R++  + S+      +P  SGLE+GNFPAEVSSSAVFRCVR++++++
Subjt:  RCRTCCKSRGFDCETHVKSTWIPASKRRDRQL------------RSLTNPKRLRDDTNSPST------LP--SGLEMGNFPAEVSSSAVFRCVRMTALDE

Query:  TEEQYAYQTAVNIGGHIFKGILYDHGP-----------------------EQPN-----SSAVSTAPIPA---GAVHEFPPISAALLDPPPPYPTPLNAY
         EE++AYQTAV+IGGHIFKGILYD GP                       +Q N     S  V+TA       G +      +A  +DP   YPTP+N +
Subjt:  TEEQYAYQTAVNIGGHIFKGILYDHGP-----------------------EQPN-----SSAVSTAPIPA---GAVHEFPPISAALLDPPPPYPTPLNAY

Query:  IAAAGTQFFLPPTS
        +  AGTQFF  P S
Subjt:  IAAAGTQFFLPPTS

Q9XGX0 Protein SHORT INTERNODES4.1e-5446.9Show/hide
Query:  GGGTGPSQLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPGVSSGDESPPRSS---LVMVRSGRGGGQVISCQDCGNQAKKDCLHMRCRT
        GG  GPS   T        L+ + N+ E +   QQQQ+     Y+S  G GV   + S   +S   L+M+RSG G G   SCQDCGNQ+KKDC HMRCRT
Subjt:  GGGTGPSQLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPGVSSGDESPPRSS---LVMVRSGRGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWIPASKRRDRQLRSLTN----------PKRLRDD----------TNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQ
        CCKSRG DC THVKSTW+PA+KRR+RQ +  T           PKR R+           T  PS   SGLE+GNFP EVSSSAVFRCVR++++D+ EE+
Subjt:  CCKSRGFDCETHVKSTWIPASKRRDRQLRSLTN----------PKRLRDD----------TNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQPNSSAVSTAP---IPAG--AVHEFPPISA----------ALLDPPP-PYPTPLNAYIAAAGTQFF
        YAY+TAV+IGGH+FKG+LYD GP + +SS   + P   I AG  A    P +S             +DP    YPTP+N ++   GT FF
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQPNSSAVSTAP---IPAG--AVHEFPPISA----------ALLDPPP-PYPTPLNAYIAAAGTQFF

Arabidopsis top hitse value%identityAlignment
AT1G19790.1 SHI-related sequence 78.2e-4252.07Show/hide
Query:  VRSGRGGGQV-----ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRSLTNP-KRLRDD-----------------------
        VRS  GG  V     ++CQDCGNQAKKDC HMRCRTCCKSRGFDC+THVKSTW+ A+KRR+RQ +    P KR+RD                        
Subjt:  VRSGRGGGQV-----ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRSLTNP-KRLRDD-----------------------

Query:  ------TNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGHIFKGILYDHGP
              T   +   SGLE  + P E+SS AVFRC+R++++D+ +E+YAYQTAV+IGGH+FKGILYD GP
Subjt:  ------TNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGHIFKGILYDHGP

AT1G75520.1 SHI-related sequence 54.6e-4539.66Show/hide
Query:  MAGFFQLGGGTGPSQLPTTASTAADG----------LFWYK----NHHESLEVW-------------QQQQE-----GGFVNYSSVVGPGVSSGDESPPR
        MAGFF LGG    S          D           L+ YK    N+++  E+W             QQQQ+       F ++  V     S+ + +  R
Subjt:  MAGFFQLGGGTGPSQLPTTASTAADG----------LFWYK----NHHESLEVW-------------QQQQE-----GGFVNYSSVVGPGVSSGDESPPR

Query:  SSLVMVRSGR--GGGQV-----ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDR--QLRSL----------TNPKRLRD----DT
        S    V S    GG  V     ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTW+PA+KRR+R  QL SL           N KRLR+    D 
Subjt:  SSLVMVRSGR--GGGQV-----ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDR--QLRSL----------TNPKRLRD----DT

Query:  NSP------------------STLPSGLEMG-NFPAEVSSSAVFRCVRMTAL--DETEEQYAYQTAVNIGGHIFKGILYDHGPEQPN-------SSAVST
        N                    +   SGLE+  + P EV+S A+FRCVR++++  DE ++ YAYQTAVNIGGHIFKGILYD GPE  +       +S  +T
Subjt:  NSP------------------STLPSGLEMG-NFPAEVSSSAVFRCVRMTAL--DETEEQYAYQTAVNIGGHIFKGILYDHGPEQPN-------SSAVST

Query:  APIPAGAVHEFP--PISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS
          +   A         +  +LDP   YP  LN++I  AGT FF PP S
Subjt:  APIPAGAVHEFP--PISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS

AT3G51060.1 Lateral root primordium (LRP) protein-related1.2e-5343.31Show/hide
Query:  PTTASTAADGLFWYKNHHESLEVWQQQQEGGFVN-YSSVVGPGVS---------SGDESPP----RSSLVMVRSGRGGGQV--ISCQDCGNQAKKDCLHM
        P++++ A   L  ++NH++   ++Q QQ    ++ YSS  G GV          SG+ S       ++++M+RSG  GG    +SCQDCGNQAKKDC HM
Subjt:  PTTASTAADGLFWYKNHHESLEVWQQQQEGGFVN-YSSVVGPGVS---------SGDESPP----RSSLVMVRSGRGGGQV--ISCQDCGNQAKKDCLHM

Query:  RCRTCCKSRGFDCETHVKSTWIPASKRRDRQL------------RSLTNPKRLRDDTNSPST------LP--SGLEMGNFPAEVSSSAVFRCVRMTALDE
        RCRTCCKSRGF+C THV+STW+PA+KRR+RQ             R  + PKR R++  + S+      +P  SGLE+GNFPAEVSSSAVFRCVR++++++
Subjt:  RCRTCCKSRGFDCETHVKSTWIPASKRRDRQL------------RSLTNPKRLRDDTNSPST------LP--SGLEMGNFPAEVSSSAVFRCVRMTALDE

Query:  TEEQYAYQTAVNIGGHIFKGILYDHGP-----------------------EQPN-----SSAVSTAPIPA---GAVHEFPPISAALLDPPPPYPTPLNAY
         EE++AYQTAV+IGGHIFKGILYD GP                       +Q N     S  V+TA       G +      +A  +DP   YPTP+N +
Subjt:  TEEQYAYQTAVNIGGHIFKGILYDHGP-----------------------EQPN-----SSAVSTAPIPA---GAVHEFPPISAALLDPPPPYPTPLNAY

Query:  IAAAGTQFFLPPTS
        +  AGTQFF  P S
Subjt:  IAAAGTQFFLPPTS

AT4G36260.1 Lateral root primordium (LRP) protein-related6.7e-4440.88Show/hide
Query:  MAGFFQLGGGTGPS--QLPTTASTAADGLFWYK--------NHHESLEVWQQQQEGGFVNYSSVVGPGVSSGDESPPRSSLVMVRSGRGGGQVISCQDCG
        MAG F LGG    +  +             WY+        N   S +VWQ   E   +++ S   P   S D  P     V   +       ISC+DCG
Subjt:  MAGFFQLGGGTGPS--QLPTTASTAADGLFWYK--------NHHESLEVWQQQQEGGFVNYSSVVGPGVSSGDESPPRSSLVMVRSGRGGGQVISCQDCG

Query:  NQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDR--QLRSLTN------------------PKRLRD----DTNSPSTLPS---GLEMG--NFP
        NQAKKDC HMRCRTCCKSRGFDC THV+STWIP ++RR+R  QL   T+                  PKR RD     T+S S LPS   GLEMG  +FP
Subjt:  NQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDR--QLRSLTN------------------PKRLRD----DTNSPSTLPS---GLEMG--NFP

Query:  AEVSSSAVFRCVRMTALDE-TEEQYAYQTAVNIGGHIFKGILYDHGPEQP-------NSSAVSTAPIPAGAVHEF-PPI---------SAALLDPPPPYP
         EVSS A+FRCV+M+ +D+  + QYAYQT VNIGGH+FKGILYD GPE          S   S++    G  H F PP+         SA  +D     P
Subjt:  AEVSSSAVFRCVRMTALDE-TEEQYAYQTAVNIGGHIFKGILYDHGPEQP-------NSSAVSTAPIPAGAVHEF-PPI---------SAALLDPPPPYP

Query:  TPLNAYIAAAGTQFFLPP
             Y +   T  F+PP
Subjt:  TPLNAYIAAAGTQFFLPP

AT5G66350.1 Lateral root primordium (LRP) protein-related2.9e-5546.9Show/hide
Query:  GGGTGPSQLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPGVSSGDESPPRSS---LVMVRSGRGGGQVISCQDCGNQAKKDCLHMRCRT
        GG  GPS   T        L+ + N+ E +   QQQQ+     Y+S  G GV   + S   +S   L+M+RSG G G   SCQDCGNQ+KKDC HMRCRT
Subjt:  GGGTGPSQLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPGVSSGDESPPRSS---LVMVRSGRGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWIPASKRRDRQLRSLTN----------PKRLRDD----------TNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQ
        CCKSRG DC THVKSTW+PA+KRR+RQ +  T           PKR R+           T  PS   SGLE+GNFP EVSSSAVFRCVR++++D+ EE+
Subjt:  CCKSRGFDCETHVKSTWIPASKRRDRQLRSLTN----------PKRLRDD----------TNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQPNSSAVSTAP---IPAG--AVHEFPPISA----------ALLDPPP-PYPTPLNAYIAAAGTQFF
        YAY+TAV+IGGH+FKG+LYD GP + +SS   + P   I AG  A    P +S             +DP    YPTP+N ++   GT FF
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQPNSSAVSTAP---IPAG--AVHEFPPISA----------ALLDPPP-PYPTPLNAYIAAAGTQFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTTTTTTCCAATTAGGCGGCGGAACAGGACCGAGCCAGCTCCCGACCACCGCCAGCACCGCCGCGGACGGGTTATTTTGGTACAAAAATCATCATGAGAGCTT
GGAAGTATGGCAGCAGCAGCAGGAAGGGGGGTTTGTTAATTACTCGTCGGTGGTGGGTCCGGGGGTGAGCTCCGGCGATGAATCGCCGCCGAGATCGTCGCTGGTGATGG
TGAGATCCGGGCGGGGAGGAGGGCAGGTGATCAGCTGCCAAGATTGTGGGAATCAAGCCAAGAAAGATTGCCTTCATATGCGGTGTAGAACTTGCTGCAAAAGCCGCGGC
TTCGACTGCGAAACGCACGTCAAAAGCACCTGGATCCCCGCCTCCAAACGTCGCGACCGCCAACTCCGCAGCCTCACTAACCCCAAACGACTCCGAGACGACACGAATTC
ACCTTCTACACTTCCGTCAGGGTTGGAAATGGGGAATTTTCCGGCGGAGGTGAGCTCATCGGCGGTGTTTCGGTGCGTCCGAATGACGGCGTTGGACGAAACGGAGGAGC
AATATGCATATCAAACGGCGGTGAATATCGGAGGCCATATCTTCAAGGGCATTCTCTACGACCACGGCCCTGAACAACCCAATTCCTCCGCCGTCTCCACCGCCCCAATC
CCCGCCGGCGCCGTCCATGAATTCCCGCCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCTACTCCTCTCAACGCCTACATCGCCGCCGCCGGTACGCAATT
TTTTCTTCCCCCAACATCT
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGTTTTTTCCAATTAGGCGGCGGAACAGGACCGAGCCAGCTCCCGACCACCGCCAGCACCGCCGCGGACGGGTTATTTTGGTACAAAAATCATCATGAGAGCTT
GGAAGTATGGCAGCAGCAGCAGGAAGGGGGGTTTGTTAATTACTCGTCGGTGGTGGGTCCGGGGGTGAGCTCCGGCGATGAATCGCCGCCGAGATCGTCGCTGGTGATGG
TGAGATCCGGGCGGGGAGGAGGGCAGGTGATCAGCTGCCAAGATTGTGGGAATCAAGCCAAGAAAGATTGCCTTCATATGCGGTGTAGAACTTGCTGCAAAAGCCGCGGC
TTCGACTGCGAAACGCACGTCAAAAGCACCTGGATCCCCGCCTCCAAACGTCGCGACCGCCAACTCCGCAGCCTCACTAACCCCAAACGACTCCGAGACGACACGAATTC
ACCTTCTACACTTCCGTCAGGGTTGGAAATGGGGAATTTTCCGGCGGAGGTGAGCTCATCGGCGGTGTTTCGGTGCGTCCGAATGACGGCGTTGGACGAAACGGAGGAGC
AATATGCATATCAAACGGCGGTGAATATCGGAGGCCATATCTTCAAGGGCATTCTCTACGACCACGGCCCTGAACAACCCAATTCCTCCGCCGTCTCCACCGCCCCAATC
CCCGCCGGCGCCGTCCATGAATTCCCGCCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCTACTCCTCTCAACGCCTACATCGCCGCCGCCGGTACGCAATT
TTTTCTTCCCCCAACATCT
Protein sequenceShow/hide protein sequence
MAGFFQLGGGTGPSQLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSSVVGPGVSSGDESPPRSSLVMVRSGRGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRG
FDCETHVKSTWIPASKRRDRQLRSLTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGHIFKGILYDHGPEQPNSSAVSTAPI
PAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS