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MS012718 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012718
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionThiamine-phosphate synthase
Genome locationscaffold63:2932440..2933440
RNA-Seq ExpressionMS012718
SyntenyMS012718
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136836.1 uncharacterized protein LOC111008437 isoform X1 [Momordica charantia]8.1e-6398.36Show/hide
Query:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW
        MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETW+RVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW
Subjt:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW

Query:  FTKSNFGQAKPQGRNSSPPKSP
        FTKSNFGQ+KPQGRNSSPPKSP
Subjt:  FTKSNFGQAKPQGRNSSPPKSP

XP_022136839.1 uncharacterized protein LOC111008437 isoform X2 [Momordica charantia]7.6e-6197.54Show/hide
Query:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW
        MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETW+RVQ VGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW
Subjt:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW

Query:  FTKSNFGQAKPQGRNSSPPKSP
        FTKSNFGQ+KPQGRNSSPPKSP
Subjt:  FTKSNFGQAKPQGRNSSPPKSP

XP_022942849.1 uncharacterized protein LOC111447756 [Cucurbita moschata]3.5e-5892.62Show/hide
Query:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW
        MF TAIRYFATKPKPKMKPIEL TPPEQTQTITRVIFDIV+EHGPLTIAETW+RVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNH+G +KQFLYTTW
Subjt:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW

Query:  FTKSNFGQAKPQGRNSSPPKSP
        FTK NFGQAKPQGRNSS PKSP
Subjt:  FTKSNFGQAKPQGRNSSPPKSP

XP_022983421.1 uncharacterized protein LOC111482027 [Cucurbita maxima]7.9e-5891.8Show/hide
Query:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW
        MF TAIRYFATKPKPKMKPIEL TPPEQTQTITRVIFDIV+EHGPLTIAETW+RVQEVGLRGLTSKRHMKIVMRWMRERQKLRL+CNH+G +KQFLYTTW
Subjt:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW

Query:  FTKSNFGQAKPQGRNSSPPKSP
        FTK NFGQAKPQGRNSS PKSP
Subjt:  FTKSNFGQAKPQGRNSSPPKSP

XP_038881247.1 uncharacterized protein LOC120072805 [Benincasa hispida]1.9e-5689.34Show/hide
Query:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW
        MF TA+RYFATKPKPKMKPIEL TPPEQTQTITRVIFDIV+EHGPLTIAETW+RVQEVGLRGLTSKRHMKIVMRWMRERQKLRL+CNH+G HKQFLYTTW
Subjt:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW

Query:  FTKSNFGQAKPQGRNSSPPKSP
        FTK NFGQAK  GRN+S PKSP
Subjt:  FTKSNFGQAKPQGRNSSPPKSP

TrEMBL top hitse value%identityAlignment
A0A0A0KY02 Uncharacterized protein7.4e-5486.89Show/hide
Query:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW
        MFGTA+R FATKPKPKMKPIEL TPPEQTQTITR IFDIVKEHGPLTIAETW+RVQEVGLRGLTSKRHMKIVMRWMRERQK+RLMCNH+G HKQFLYTTW
Subjt:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW

Query:  FTKSNFGQAKPQGRNSSPPKSP
        FTK NF QAK   RN S PK P
Subjt:  FTKSNFGQAKPQGRNSSPPKSP

A0A6J1C5G7 uncharacterized protein LOC111008437 isoform X23.7e-6197.54Show/hide
Query:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW
        MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETW+RVQ VGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW
Subjt:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW

Query:  FTKSNFGQAKPQGRNSSPPKSP
        FTKSNFGQ+KPQGRNSSPPKSP
Subjt:  FTKSNFGQAKPQGRNSSPPKSP

A0A6J1C6J6 uncharacterized protein LOC111008437 isoform X13.9e-6398.36Show/hide
Query:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW
        MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETW+RVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW
Subjt:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW

Query:  FTKSNFGQAKPQGRNSSPPKSP
        FTKSNFGQ+KPQGRNSSPPKSP
Subjt:  FTKSNFGQAKPQGRNSSPPKSP

A0A6J1FSI5 uncharacterized protein LOC1114477561.7e-5892.62Show/hide
Query:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW
        MF TAIRYFATKPKPKMKPIEL TPPEQTQTITRVIFDIV+EHGPLTIAETW+RVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNH+G +KQFLYTTW
Subjt:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW

Query:  FTKSNFGQAKPQGRNSSPPKSP
        FTK NFGQAKPQGRNSS PKSP
Subjt:  FTKSNFGQAKPQGRNSSPPKSP

A0A6J1J258 uncharacterized protein LOC1114820273.8e-5891.8Show/hide
Query:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW
        MF TAIRYFATKPKPKMKPIEL TPPEQTQTITRVIFDIV+EHGPLTIAETW+RVQEVGLRGLTSKRHMKIVMRWMRERQKLRL+CNH+G +KQFLYTTW
Subjt:  MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTW

Query:  FTKSNFGQAKPQGRNSSPPKSP
        FTK NFGQAKPQGRNSS PKSP
Subjt:  FTKSNFGQAKPQGRNSSPPKSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73940.1 unknown protein8.5e-1838.71Show/hide
Query:  IRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYT
        +RY + +    ++ I    P ++   I+  ++D+ K HGPL++  TW R QE G+ GL SK HMK++++WMR ++ L+L+CN +GS K+F +T
Subjt:  IRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYT

AT5G49410.1 unknown protein4.9e-5075Show/hide
Query:  GTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTWFT
        G   R+FATKPKPKMKPIELNTPPEQTQTITRVIFDI+K+HGPLTIAETW+RV+EVGLRGLTSKRHMKI++RWMRERQKL+L+CNH+G HKQFLYTTWFT
Subjt:  GTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTWFT

Query:  KSN----FGQAKPQ---GRNSS-PPKSP
        K N    F +  P+   G++S  PPK P
Subjt:  KSN----FGQAKPQ---GRNSS-PPKSP

AT5G49410.2 unknown protein4.9e-5075Show/hide
Query:  GTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTWFT
        G   R+FATKPKPKMKPIELNTPPEQTQTITRVIFDI+K+HGPLTIAETW+RV+EVGLRGLTSKRHMKI++RWMRERQKL+L+CNH+G HKQFLYTTWFT
Subjt:  GTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTWFT

Query:  KSN----FGQAKPQ---GRNSS-PPKSP
        K N    F +  P+   G++S  PPK P
Subjt:  KSN----FGQAKPQ---GRNSS-PPKSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGGACTGCAATAAGGTATTTCGCGACGAAGCCAAAGCCGAAGATGAAGCCGATAGAGCTAAATACTCCACCGGAGCAAACGCAGACGATTACTAGAGTCATCTT
CGACATCGTTAAGGAGCATGGTCCGCTAACCATAGCCGAAACTTGGGAACGCGTTCAGGAGGTTGGTTTGAGAGGATTAACAAGCAAAAGGCACATGAAAATAGTAATGA
GATGGATGAGGGAACGGCAGAAGTTAAGATTAATGTGCAATCACATAGGATCTCATAAGCAGTTTCTTTATACCACCTGGTTTACGAAATCCAACTTTGGGCAGGCAAAG
CCACAGGGGCGTAATTCTTCCCCACCCAAAAGCCCT
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGGACTGCAATAAGGTATTTCGCGACGAAGCCAAAGCCGAAGATGAAGCCGATAGAGCTAAATACTCCACCGGAGCAAACGCAGACGATTACTAGAGTCATCTT
CGACATCGTTAAGGAGCATGGTCCGCTAACCATAGCCGAAACTTGGGAACGCGTTCAGGAGGTTGGTTTGAGAGGATTAACAAGCAAAAGGCACATGAAAATAGTAATGA
GATGGATGAGGGAACGGCAGAAGTTAAGATTAATGTGCAATCACATAGGATCTCATAAGCAGTTTCTTTATACCACCTGGTTTACGAAATCCAACTTTGGGCAGGCAAAG
CCACAGGGGCGTAATTCTTCCCCACCCAAAAGCCCT
Protein sequenceShow/hide protein sequence
MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWERVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTWFTKSNFGQAK
PQGRNSSPPKSP