; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012721 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012721
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiondehydrin DHN1-like
Genome locationscaffold63:2944189..2944548
RNA-Seq ExpressionMS012721
SyntenyMS012721
Gene Ontology termsGO:0009415 - response to water (biological process)
GO:0005829 - cytosol (cellular component)
InterPro domainsIPR000167 - Dehydrin
IPR030513 - Dehydrin, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577230.1 hypothetical protein SDJN03_24804, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3060.74Show/hide
Query:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPY----------GVGDPAGRTAGTG---GQTQQHRGGDQGQGMFHHDS-
        MAHYQN Y  QSG D+YGNPIRQTDEYGNVI ++ Q  DPLRRT E R TD Y          GVGDP GRT GTG   GQ QQ + G    GMFHHD  
Subjt:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPY----------GVGDPAGRTAGTG---GQTQQHRGGDQGQGMFHHDS-

Query:  -QRAATTGYPAAEQGGGREKKGMMEKIKEKLPGGH
             + GY  AEQG   EKKGMMEKIKEKLPGG+
Subjt:  -QRAATTGYPAAEQGGGREKKGMMEKIKEKLPGGH

KAG7015320.1 hypothetical protein SDJN02_22955, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-3161.48Show/hide
Query:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPY----------GVGDPAGRTAGTG---GQTQQHRGGDQGQGMFHHDS-
        MAHYQN Y  QSG D+YGNPIRQTDEYGNVI ++ Q  DPLRRT E R TD Y          GVGDP GRT GTG   GQ QQ RG     GMFHHD  
Subjt:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPY----------GVGDPAGRTAGTG---GQTQQHRGGDQGQGMFHHDS-

Query:  -QRAATTGYPAAEQGGGREKKGMMEKIKEKLPGGH
             + GY  AEQG   EKKGMMEKIKEKLPGG+
Subjt:  -QRAATTGYPAAEQGGGREKKGMMEKIKEKLPGGH

XP_022136840.1 dehydrin DHN1-like [Momordica charantia]7.5e-6198.33Show/hide
Query:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDSQRAATTGYPAAEQG
        MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDSQRAATTGY AAEQG
Subjt:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDSQRAATTGYPAAEQG

Query:  GGREKKGMMEKIKEKLPGGH
        GGREKKGMMEKIKEKLPG H
Subjt:  GGREKKGMMEKIKEKLPGGH

XP_022929430.1 dehydrin DHN1-like [Cucurbita moschata]6.8e-3059.09Show/hide
Query:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPY----------GVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDS--QR
        MAHYQN Y  QSG D+YGNPIRQTDEYGNVI ++ Q  DPLRRT E R TD Y          GVGDP GRT GTG    + +   Q  GMFHHD     
Subjt:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPY----------GVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDS--QR

Query:  AATTGYPAAEQGGGREKKGMMEKIKEKLPGGH
          + GY  AEQG   EKKGMMEKIKEKLPGG+
Subjt:  AATTGYPAAEQGGGREKKGMMEKIKEKLPGGH

XP_023553197.1 dehydrin DHN3-like [Cucurbita pepo subsp. pepo]3.1e-3059.42Show/hide
Query:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPY----------GVGDPAGRTAGTGGQTQQHRGGDQGQ------GMFHH
        MAHYQN Y  QSG D+YGNPIRQTDEYGNVI ++ Q VDPLRRT E R TD Y          GVGDP GRT GTG  T  + GG  GQ      GMFHH
Subjt:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPY----------GVGDPAGRTAGTGGQTQQHRGGDQGQ------GMFHH

Query:  DS--QRAATTGYPAAEQGGGREKKGMMEKIKEKLPGGH
        D       + GY   EQG   EKKGMMEKIKEKLPGG+
Subjt:  DS--QRAATTGYPAAEQGGGREKKGMMEKIKEKLPGGH

TrEMBL top hitse value%identityAlignment
A0A1S3BTX2 dehydrin DHN11.6e-2144.51Show/hide
Query:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYG---------VGDPAGR-----TAGT------------GGQTQQHR-
        MAHYQ+      GTD+YGNPIRQTDEYGNVI E+GQ+ DPLRRTGE R+TD YG          G+P G      T GT            GG  QQH+ 
Subjt:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYG---------VGDPAGR-----TAGT------------GGQTQQHR-

Query:  -GG--------------DQGQ-----------------GMFHHDSQRAATT---GYPAAEQGGGREKKGMMEKIKEKLPGGH
         GG              D G                  G  HH+ Q  +TT   GY +AE GG  EKKG+MEKIKEKLPG H
Subjt:  -GG--------------DQGQ-----------------GMFHHDSQRAATT---GYPAAEQGGGREKKGMMEKIKEKLPGGH

A0A5D3CYN8 Dehydrin DHN11.6e-2144.51Show/hide
Query:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYG---------VGDPAGR-----TAGT------------GGQTQQHR-
        MAHYQ+      GTD+YGNPIRQTDEYGNVI E+GQ+ DPLRRTGE R+TD YG          G+P G      T GT            GG  QQH+ 
Subjt:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYG---------VGDPAGR-----TAGT------------GGQTQQHR-

Query:  -GG--------------DQGQ-----------------GMFHHDSQRAATT---GYPAAEQGGGREKKGMMEKIKEKLPGGH
         GG              D G                  G  HH+ Q  +TT   GY +AE GG  EKKG+MEKIKEKLPG H
Subjt:  -GG--------------DQGQ-----------------GMFHHDSQRAATT---GYPAAEQGGGREKKGMMEKIKEKLPGGH

A0A6J1C526 dehydrin DHN1-like3.6e-6198.33Show/hide
Query:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDSQRAATTGYPAAEQG
        MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDSQRAATTGY AAEQG
Subjt:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDSQRAATTGYPAAEQG

Query:  GGREKKGMMEKIKEKLPGGH
        GGREKKGMMEKIKEKLPG H
Subjt:  GGREKKGMMEKIKEKLPGGH

A0A6J1C5G3 dehydrin Xero 1-like3.3e-2252.21Show/hide
Query:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPES--GQFVDPLRRTGELRDTDPYG----VGDPAGRTAGTGGQTQQHRG-GDQGQGMFHHDS-------
        MAHYQN YG QSGTD+YGNPIR+TDEYGNVI ++  GQ+ DPL RT E R TD YG      D  G   GTGG T +  G G  G G  HH         
Subjt:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPES--GQFVDPLRRTGELRDTDPYG----VGDPAGRTAGTGGQTQQHRG-GDQGQGMFHHDS-------

Query:  QRAATTGYPAAEQG--GGREKKGMMEKIKEKLPGGH
        +R+ ++   ++E    GGR KKG+ EKIKEKLPG H
Subjt:  QRAATTGYPAAEQG--GGREKKGMMEKIKEKLPGGH

A0A6J1EUD8 dehydrin DHN1-like3.3e-3059.09Show/hide
Query:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPY----------GVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDS--QR
        MAHYQN Y  QSG D+YGNPIRQTDEYGNVI ++ Q  DPLRRT E R TD Y          GVGDP GRT GTG    + +   Q  GMFHHD     
Subjt:  MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPY----------GVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDS--QR

Query:  AATTGYPAAEQGGGREKKGMMEKIKEKLPGGH
          + GY  AEQG   EKKGMMEKIKEKLPGG+
Subjt:  AATTGYPAAEQGGGREKKGMMEKIKEKLPGGH

SwissProt top hitse value%identityAlignment
A8CVF3 Dehydrin DHN11.3e-0737.84Show/hide
Query:  MAHYQNPYGVQSGTDEYGNPIRQTDE------------YGNVIPESGQFVDP--LRRTGELRDTDPYGVGDPAGR-------TAGTGGQTQQHRGG----
        MA Y + YG Q  TDEYGNPIRQT E            YG      G   D      T   + TD YG     G        T GT G+   H GG    
Subjt:  MAHYQNPYGVQSGTDEYGNPIRQTDE------------YGNVIPESGQFVDP--LRRTGELRDTDPYGVGDPAGR-------TAGTGGQTQQHRGG----

Query:  --DQGQGMFHHDSQRAATTGYPAAEQG--GGREKKGMMEKIKEKLPGG
          D G        +R  ++G  ++E    GGR KKG+ EKIKEKLPGG
Subjt:  --DQGQGMFHHDSQRAATTGYPAAEQG--GGREKKGMMEKIKEKLPGG

P09442 Late embryogenesis abundant protein D-115.9e-0835.83Show/hide
Query:  MAHYQNPYGVQ--SGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDSQRAATTGYPAAE
        MAH+QN Y     + TD YGNP R+TDEYGN IP                 T   G G       G GG    H GG  G     H +  ++++   + +
Subjt:  MAHYQNPYGVQ--SGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDSQRAATTGYPAAE

Query:  QGGGREKKGMMEKIKEKLPG
        +G G++KKG+ E++KEK+PG
Subjt:  QGGGREKKGMMEKIKEKLPG

P28639 Dehydrin DHN15.3e-0937.06Show/hide
Query:  MAHYQNPYGVQSG-TDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHD------------SQ
        M+ YQN YG Q+G TDEYGNP+ Q D+YGN I   G        TGE         G   G T    G  QQHRG DQ  G   H               
Subjt:  MAHYQNPYGVQSG-TDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHD------------SQ

Query:  RAATTGYPAAEQGGGR------------EKKGMMEKIKEKLPG
            +GY      GG             +KKG+M+KIKEK+PG
Subjt:  RAATTGYPAAEQGGGR------------EKKGMMEKIKEKLPG

P28640 Dehydrin DHN21.3e-0736.55Show/hide
Query:  MAHYQNPYGVQS-GTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDS-------------
        M+ YQN YG Q+  TDEYGNP+ Q D+YGN I   G        TGE         G   G T    G  QQHRG DQ  G   H               
Subjt:  MAHYQNPYGVQS-GTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDS-------------

Query:  -------------QRAATTGYPAAEQGGGREKKGMMEKIKEKLPG
                       + TT Y   E  G  +KKG+M+KIKEK+PG
Subjt:  -------------QRAATTGYPAAEQGGGREKKGMMEKIKEKLPG

P28641 Dehydrin DHN36.5e-0732.93Show/hide
Query:  MAHYQNPYGVQSG-TDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHH---------------
        M+ YQN YG Q+G TDEYGNP+ Q D+YGN I   G        TGE         G   G T    G  QQHRG DQ  G   H               
Subjt:  MAHYQNPYGVQSG-TDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHH---------------

Query:  ---DSQRAATTG---------YPAAEQGGG---------------------REKKGMMEKIKEKLPG
            S     TG         Y +   G G                      +KKG+M+KIKEK+PG
Subjt:  ---DSQRAATTG---------YPAAEQGGG---------------------REKKGMMEKIKEKLPG

Arabidopsis top hitse value%identityAlignment
AT3G50980.1 dehydrin xero 13.3e-0635.61Show/hide
Query:  MAHYQNPYGVQ---SGTDEYGNPI-RQTDEYGN-----VIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDSQRAAT
        M  YQN  G Q      D++GNP    T  YG       + E G     L R+G    +     G   GR     G T++ +    G    HHDS + ++
Subjt:  MAHYQNPYGVQ---SGTDEYGNPI-RQTDEYGN-----VIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDSQRAAT

Query:  TGYPAAEQGGG---REKKGMMEKIKEKLPGGH
         G        G    EKKGMMEKIKEKLPGGH
Subjt:  TGYPAAEQGGG---REKKGMMEKIKEKLPGGH

AT5G66400.1 Dehydrin family protein6.0e-0836.3Show/hide
Query:  MAHYQNPYGVQSGTDEYGNPIRQT-DEYGNVIPESGQFV----------------DPLRRTGELRDTDPYGVGDPAGRTA-GTGGQTQQH--------RG
        MA YQN  G Q+ TDEYGNPI+Q  DEYGN +   G                         G+   T   G G   G    GTGG  + H         G
Subjt:  MAHYQNPYGVQSGTDEYGNPIRQT-DEYGNVIPESGQFV----------------DPLRRTGELRDTDPYGVGDPAGRTA-GTGGQTQQH--------RG

Query:  GDQGQGMFHHDSQRAATTGYPAAEQGGGREKKGMMEKIKEKLPGGH
        G  G GM H     ++++     +  GGR KKG+ +KIKEKLPG H
Subjt:  GDQGQGMFHHDSQRAATTGYPAAEQGGGREKKGMMEKIKEKLPGGH

AT5G66400.2 Dehydrin family protein4.6e-0837.24Show/hide
Query:  MAHYQNPYGVQSGTDEYGNPIRQT-DEYGNVIPESGQFVDPLRRTGELRDTDPYGVG----DPAGRTAGTGGQTQQHRGGDQ----GQGMFHHDSQ----
        MA YQN  G Q+ TDEYGNPI+Q  DEYGN +   G         G       YG G       G+  GTGGQ      G +    G G  HH  +    
Subjt:  MAHYQNPYGVQSGTDEYGNPIRQT-DEYGNVIPESGQFVDPLRRTGELRDTDPYGVG----DPAGRTAGTGGQTQQHRGGDQ----GQGMFHHDSQ----

Query:  -----------RAATTGYPAAEQG-GGREKKGMMEKIKEKLPGGH
                   R+ +    +++ G GGR KKG+ +KIKEKLPG H
Subjt:  -----------RAATTGYPAAEQG-GGREKKGMMEKIKEKLPGGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACATTACCAGAATCCGTACGGCGTGCAATCCGGAACCGACGAATACGGCAACCCGATTCGGCAGACCGACGAATACGGGAACGTGATCCCGGAGTCGGGCCAGTT
CGTGGACCCGCTCCGCCGGACCGGCGAATTGCGCGACACCGATCCGTACGGCGTGGGAGACCCGGCCGGGCGAACCGCTGGGACCGGTGGACAGACGCAGCAGCATAGGG
GGGGCGATCAGGGACAGGGAATGTTTCATCATGATAGCCAAAGGGCGGCGACGACGGGGTACCCGGCGGCGGAGCAGGGCGGGGGTCGTGAGAAGAAGGGGATGATGGAG
AAGATCAAGGAGAAGCTGCCGGGAGGGCAC
mRNA sequenceShow/hide mRNA sequence
ATGGCACATTACCAGAATCCGTACGGCGTGCAATCCGGAACCGACGAATACGGCAACCCGATTCGGCAGACCGACGAATACGGGAACGTGATCCCGGAGTCGGGCCAGTT
CGTGGACCCGCTCCGCCGGACCGGCGAATTGCGCGACACCGATCCGTACGGCGTGGGAGACCCGGCCGGGCGAACCGCTGGGACCGGTGGACAGACGCAGCAGCATAGGG
GGGGCGATCAGGGACAGGGAATGTTTCATCATGATAGCCAAAGGGCGGCGACGACGGGGTACCCGGCGGCGGAGCAGGGCGGGGGTCGTGAGAAGAAGGGGATGATGGAG
AAGATCAAGGAGAAGCTGCCGGGAGGGCAC
Protein sequenceShow/hide protein sequence
MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYGVGDPAGRTAGTGGQTQQHRGGDQGQGMFHHDSQRAATTGYPAAEQGGGREKKGMME
KIKEKLPGGH