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MS012728 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012728
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP synthase subunit alpha, chloroplastic
Genome locationscaffold63:3007040..3007356
RNA-Seq ExpressionMS012728
SyntenyMS012728
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domainsIPR004100 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
IPR023366 - ATP synthase subunit alpha, N-terminal domain-like superfamily
IPR036121 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3952351.1 hypothetical protein CMV_022079 [Castanea mollissima]3.2e-3985.85Show/hide
Query:  SNIICERIEQYNREVK-INTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREVK +NTGTVLQVGD IARIYGLDEVMAGELVEFEEG I I LNLESNNVGVV M GGL++ EGSSVKATGRIAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVK-INTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALAKP
Subjt:  NALAKP

QCW93720.1 CF1 subunit alpha [Erismadelphus exsul]2.4e-3986.79Show/hide
Query:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREVKI NTGTVLQVGD IARIYGLDEVMAGELVEFEEG I I LNLESNNVGVV M GGL++ EGSSVKATGRIAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALAKP
Subjt:  NALAKP

YP_004021135.1 ATP synthase CF1 alpha subunit [Castanea mollissima]3.2e-3985.85Show/hide
Query:  SNIICERIEQYNREVK-INTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREVK +NTGTVLQVGD IARIYGLDEVMAGELVEFEEG I I LNLESNNVGVV M GGL++ EGSSVKATGRIAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVK-INTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALAKP
Subjt:  NALAKP

YP_009341762.1 ATP synthase CF1 alpha subunit [Castanopsis concinna]3.2e-3985.85Show/hide
Query:  SNIICERIEQYNREVK-INTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREVK +NTGTVLQVGD IARIYGLDEVMAGELVEFEEG I I LNLESNNVGVV M GGL++ EGSSVKATGRIAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVK-INTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALAKP
Subjt:  NALAKP

YP_009532137.1 ATP synthase CF1 alpha subunit [Lamprocapnos spectabilis]3.2e-3985.85Show/hide
Query:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREVKI NTGTVLQVGD IARIYGLDEVMAGELVEFEEG + I LNLESNNVGVV M GGL++ EGSSVKATGRIAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALAKP
Subjt:  NALAKP

TrEMBL top hitse value%identityAlignment
A0A0E3JWA7 ATP synthase subunit alpha, chloroplastic1.5e-3985.85Show/hide
Query:  SNIICERIEQYNREVK-INTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREVK +NTGTVLQVGD IARIYGLDEVMAGELVEFEEG I I LNLESNNVGVV M GGL++ EGSSVKATGRIAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVK-INTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALAKP
Subjt:  NALAKP

A0A1C8V6T2 ATP synthase subunit alpha, chloroplastic1.5e-3985.85Show/hide
Query:  SNIICERIEQYNREVK-INTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREVK +NTGTVLQVGD IARIYGLDEVMAGELVEFEEG I I LNLESNNVGVV M GGL++ EGSSVKATGRIAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVK-INTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALAKP
Subjt:  NALAKP

A0A1P8D7Z3 ATP synthase subunit alpha, chloroplastic1.5e-3985.85Show/hide
Query:  SNIICERIEQYNREVK-INTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREVK +NTGTVLQVGD IARIYGLDEVMAGELVEFEEG I I LNLESNNVGVV M GGL++ EGSSVKATGRIAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVK-INTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALAKP
Subjt:  NALAKP

A0A385KCA7 ATP synthase subunit alpha, chloroplastic1.5e-3985.85Show/hide
Query:  SNIICERIEQYNREVK-INTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREVK +NTGTVLQVGD IARIYGLDEVMAGELVEFEEG I I LNLESNNVGVV M GGL++ EGSSVKATGRIAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVK-INTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALAKP
Subjt:  NALAKP

A0A4Y5PNS9 ATP synthase subunit alpha, chloroplastic1.2e-3986.79Show/hide
Query:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREVKI NTGTVLQVGD IARIYGLDEVMAGELVEFEEG I I LNLESNNVGVV M GGL++ EGSSVKATGRIAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALAKP
Subjt:  NALAKP

SwissProt top hitse value%identityAlignment
A4GYP3 ATP synthase subunit alpha, chloroplastic4.6e-4184.91Show/hide
Query:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREVKI NTGTVLQVGD IARIYGLDEVMAGELVEFEEG I I LNLESNNVGVV M  GL++ EGSSVKATG+IAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALAKP
Subjt:  NALAKP

B1NWD5 ATP synthase subunit alpha, chloroplastic2.1e-4185.85Show/hide
Query:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREVKI NTGTVLQVGD IARIYGLDEVMAGELVEFEEG I I LNLESNNVGVV M  GL++ EGSSVKATGRIAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALAKP
Subjt:  NALAKP

Q14FH2 ATP synthase subunit alpha, chloroplastic4.6e-4184.91Show/hide
Query:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREVKI NTGTVLQVGD IARIYGLDEVMAGELVEFEEG I I LNLESNNVGVV M  GL++ EGSSVKATG+IAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALAKP
Subjt:  NALAKP

Q3C1H4 ATP synthase subunit alpha, chloroplastic4.6e-4185.85Show/hide
Query:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREVKI NTGTVLQVGD IARI+GLDEVMAGELVEFEEG I I LNLESNNVGVV M  GLL+ EGSSVKATGRIAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALAKP
Subjt:  NALAKP

Q49L13 ATP synthase subunit alpha, chloroplastic2.1e-4185.85Show/hide
Query:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREVKI NTGTVLQVGD IARIYGLDEVMAGELVEFEEG I I LNLESNNVGVV M  GL++ EGSSVKATGRIAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALAKP
Subjt:  NALAKP

Arabidopsis top hitse value%identityAlignment
AT2G07698.1 ATPase, F1 complex, alpha subunit protein2.8e-1740.57Show/hide
Query:  SNIICERIEQYNREVKIN-TGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        +N+   RI  +    +++  G V+ VGD IA++YGL+E+ AGE+V F  G+  + LNLE+ NVG+V   G   + EG  VK TG I  +P  +A LG V+
Subjt:  SNIICERIEQYNREVKIN-TGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        +A+  P
Subjt:  NALAKP

ATCG00120.1 ATP synthase subunit alpha6.1e-4183.02Show/hide
Query:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        SNII ERIEQYNREV I NTGTVLQVGD IARIYGLDEVMAGELVEFEEG I I LNLESNNVGVV M  GL++ EGSSVKATG+IAQIP++EAYLG VI
Subjt:  SNIICERIEQYNREVKI-NTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        NALA P
Subjt:  NALAKP

ATMG01190.1 ATP synthase subunit 12.8e-1740.57Show/hide
Query:  SNIICERIEQYNREVKIN-TGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI
        +N+   RI  +    +++  G V+ VGD IA++YGL+E+ AGE+V F  G+  + LNLE+ NVG+V   G   + EG  VK TG I  +P  +A LG V+
Subjt:  SNIICERIEQYNREVKIN-TGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVI

Query:  NALAKP
        +A+  P
Subjt:  NALAKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTAATATTATCTGTGAACGTATTGAGCAATATAATAGAGAAGTAAAAATTAATACTGGTACCGTACTTCAAGTAGGCGACGACATTGCTCGTATTTATGGTCTTGATGA
AGTAATGGCAGGTGAATTAGTAGAATTTGAAGAAGGTATTATAAGCATAACTCTAAATTTAGAATCAAATAATGTTGGTGTTGTATCAATGGATGGTGGTTTGCTGATGC
TGGAGGGAAGTTCTGTAAAAGCAACAGGAAGAATTGCTCAGATACCAATAACCGAGGCTTATTTAGGTCATGTTATAAATGCCCTGGCTAAACCT
mRNA sequenceShow/hide mRNA sequence
AGTAATATTATCTGTGAACGTATTGAGCAATATAATAGAGAAGTAAAAATTAATACTGGTACCGTACTTCAAGTAGGCGACGACATTGCTCGTATTTATGGTCTTGATGA
AGTAATGGCAGGTGAATTAGTAGAATTTGAAGAAGGTATTATAAGCATAACTCTAAATTTAGAATCAAATAATGTTGGTGTTGTATCAATGGATGGTGGTTTGCTGATGC
TGGAGGGAAGTTCTGTAAAAGCAACAGGAAGAATTGCTCAGATACCAATAACCGAGGCTTATTTAGGTCATGTTATAAATGCCCTGGCTAAACCT
Protein sequenceShow/hide protein sequence
SNIICERIEQYNREVKINTGTVLQVGDDIARIYGLDEVMAGELVEFEEGIISITLNLESNNVGVVSMDGGLLMLEGSSVKATGRIAQIPITEAYLGHVINALAKP