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MS012735 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012735
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionlate embryogenesis abundant protein D-29-like
Genome locationscaffold63:3058789..3059040
RNA-Seq ExpressionMS012735
SyntenyMS012735
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146505.1 late embryogenesis abundant protein D-29 [Cucumis sativus]2.2e-1155.41Show/hide
Query:  VAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS
        VAVVW+VL      +KC G+EE VQD+K  + QM++DA + EKAEAVK  A+ V  DAKD A SWS+W Y+K S
Subjt:  VAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS

XP_008452083.1 PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo]2.2e-1154.67Show/hide
Query:  VVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS
        VVAVVW+VL      EKC G+ E V+DVK  ++++++DA + EKAEAVK  A+ V  DAKD AESWS+W Y+K S
Subjt:  VVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS

XP_022136788.1 uncharacterized protein LOC111008401 [Momordica charantia]9.0e-3798.81Show/hide
Query:  MARIRPTSSVVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS
        MARIRPTSSVVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGV HDAKDTAESWSSWVYNKFS
Subjt:  MARIRPTSSVVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS

XP_038906272.1 late embryogenesis abundant protein D-29 isoform X1 [Benincasa hispida]1.7e-1153.25Show/hide
Query:  SVVAVVWVVLAVAVGVEKCMGW-EETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS
        SVVAVVW++L      +KC G  EE +QDVK  +++++ D ++ EKAEAVK GA+ V HDAK+ AESWS+W Y K S
Subjt:  SVVAVVWVVLAVAVGVEKCMGW-EETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS

XP_038906279.1 late embryogenesis abundant protein D-29 isoform X2 [Benincasa hispida]1.7e-1153.25Show/hide
Query:  SVVAVVWVVLAVAVGVEKCMGW-EETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS
        SVVAVVW++L      +KC G  EE +QDVK  +++++ D ++ EKAEAVK GA+ V HDAK+ AESWS+W Y K S
Subjt:  SVVAVVWVVLAVAVGVEKCMGW-EETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS

TrEMBL top hitse value%identityAlignment
A0A0A0KUJ5 Uncharacterized protein2.7e-1053.95Show/hide
Query:  VVAVVWVVLAVAVGVEKCMGW-EETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS
        VVAVVW+VL      EKC G+ EE V+DVK+ ++++++ AN+ EKAEAVK  A+ V  +AKD  ESWS+W YNK S
Subjt:  VVAVVWVVLAVAVGVEKCMGW-EETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS

A0A0A0KY19 Late embryogenesis abundant1.1e-1155.41Show/hide
Query:  VAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS
        VAVVW+VL      +KC G+EE VQD+K  + QM++DA + EKAEAVK  A+ V  DAKD A SWS+W Y+K S
Subjt:  VAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS

A0A1S3BT31 late embryogenesis abundant protein D-29-like1.1e-1154.67Show/hide
Query:  VVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS
        VVAVVW+VL      EKC G+ E V+DVK  ++++++DA + EKAEAVK  A+ V  DAKD AESWS+W Y+K S
Subjt:  VVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS

A0A5A7TSE6 Late embryogenesis abundant protein D-29-like1.1e-1154.67Show/hide
Query:  VVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS
        VVAVVW+VL      EKC G+ E V+DVK  ++++++DA + EKAEAVK  A+ V  DAKD AESWS+W Y+K S
Subjt:  VVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS

A0A6J1C8I5 uncharacterized protein LOC1110084014.4e-3798.81Show/hide
Query:  MARIRPTSSVVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS
        MARIRPTSSVVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGV HDAKDTAESWSSWVYNKFS
Subjt:  MARIRPTSSVVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGAATCAGACCGACGTCGTCGGTTGTGGCGGTTGTGTGGGTGGTGCTGGCGGTGGCGGTGGGCGTGGAGAAATGCATGGGGTGGGAGGAGACGGTGCAAGACGT
GAAGAGTAAAATAACCCAAATGTCGGATGACGCAAATATTCCTGAAAAGGCAGAGGCCGTTAAGGAAGGCGCCGCTGGAGTTTTGCATGACGCCAAGGACACGGCCGAGT
CCTGGTCCAGCTGGGTTTACAACAAATTTTCC
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGAATCAGACCGACGTCGTCGGTTGTGGCGGTTGTGTGGGTGGTGCTGGCGGTGGCGGTGGGCGTGGAGAAATGCATGGGGTGGGAGGAGACGGTGCAAGACGT
GAAGAGTAAAATAACCCAAATGTCGGATGACGCAAATATTCCTGAAAAGGCAGAGGCCGTTAAGGAAGGCGCCGCTGGAGTTTTGCATGACGCCAAGGACACGGCCGAGT
CCTGGTCCAGCTGGGTTTACAACAAATTTTCC
Protein sequenceShow/hide protein sequence
MARIRPTSSVVAVVWVVLAVAVGVEKCMGWEETVQDVKSKITQMSDDANIPEKAEAVKEGAAGVLHDAKDTAESWSSWVYNKFS