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MS012740 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012740
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPeptidyl-prolyl cis-trans isomerase
Genome locationscaffold63:3087839..3089514
RNA-Seq ExpressionMS012740
SyntenyMS012740
Gene Ontology termsGO:0000413 - protein peptidyl-prolyl isomerization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function)
InterPro domainsIPR000297 - Peptidyl-prolyl cis-trans isomerase, PpiC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452069.1 PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo]1.1e-5490.98Show/hide
Query:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL
        MSSS   GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTV+RDDI+SGK+KFEDIA+RISDCSSAKRGGDLGPFGRGQMQKPFEEA F L
Subjt:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL

Query:  KVGEISEIVDTDSGVHIIKRTA
        KVGEIS+IVDTDSGVHIIKRTA
Subjt:  KVGEISEIVDTDSGVHIIKRTA

XP_022136966.1 peptidyl-prolyl cis-trans isomerase Pin1 [Momordica charantia]2.4e-59100Show/hide
Query:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL
        MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL
Subjt:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL

Query:  KVGEISEIVDTDSGVHIIKRTA
        KVGEISEIVDTDSGVHIIKRTA
Subjt:  KVGEISEIVDTDSGVHIIKRTA

XP_022943036.1 peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita moschata]1.1e-5693.44Show/hide
Query:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL
        MSSS AAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTV+RDDI+SGKSKFED+ASRISDCSSAKRGGDLGPFGRGQMQKPFEEA F L
Subjt:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL

Query:  KVGEISEIVDTDSGVHIIKRTA
        KVGE+S+IVDTDSGVHIIKRTA
Subjt:  KVGEISEIVDTDSGVHIIKRTA

XP_022984600.1 peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita maxima]1.6e-5591.8Show/hide
Query:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL
        MSSS AAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTV+RDDI+SGKSKFED+ASRISDCSSAKRGGDLGPFGRGQMQKPFEEA F L
Subjt:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL

Query:  KVGEISEIVDTDSGVHIIKRTA
        KVGE+S+IVDTDSGVHIIKR A
Subjt:  KVGEISEIVDTDSGVHIIKRTA

XP_038878149.1 peptidyl-prolyl cis-trans isomerase Pin1 [Benincasa hispida]3.7e-5591.8Show/hide
Query:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL
        MSSS A GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLT +RDDI+SGK KFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEA F L
Subjt:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL

Query:  KVGEISEIVDTDSGVHIIKRTA
        KVGE+S+IVDTDSGVHIIKRTA
Subjt:  KVGEISEIVDTDSGVHIIKRTA

TrEMBL top hitse value%identityAlignment
A0A5A7TSF6 Peptidyl-prolyl cis-trans isomerase5.2e-5590.98Show/hide
Query:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL
        MSSS   GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTV+RDDI+SGK+KFEDIA+RISDCSSAKRGGDLGPFGRGQMQKPFEEA F L
Subjt:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL

Query:  KVGEISEIVDTDSGVHIIKRTA
        KVGEIS+IVDTDSGVHIIKRTA
Subjt:  KVGEISEIVDTDSGVHIIKRTA

A0A6J1C505 Peptidyl-prolyl cis-trans isomerase1.2e-59100Show/hide
Query:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL
        MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL
Subjt:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL

Query:  KVGEISEIVDTDSGVHIIKRTA
        KVGEISEIVDTDSGVHIIKRTA
Subjt:  KVGEISEIVDTDSGVHIIKRTA

A0A6J1FQL7 Peptidyl-prolyl cis-trans isomerase5.5e-5793.44Show/hide
Query:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL
        MSSS AAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTV+RDDI+SGKSKFED+ASRISDCSSAKRGGDLGPFGRGQMQKPFEEA F L
Subjt:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL

Query:  KVGEISEIVDTDSGVHIIKRTA
        KVGE+S+IVDTDSGVHIIKRTA
Subjt:  KVGEISEIVDTDSGVHIIKRTA

A0A6J1J7P6 Peptidyl-prolyl cis-trans isomerase5.5e-5793.44Show/hide
Query:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL
        MSSS AAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTV+RDDI+SGKSKFED+ASRISDCSSAKRGGDLGPFGRGQMQKPFEEA F L
Subjt:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL

Query:  KVGEISEIVDTDSGVHIIKRTA
        KVGE+S+IVDTDSGVHIIKRTA
Subjt:  KVGEISEIVDTDSGVHIIKRTA

A0A6J1J909 Peptidyl-prolyl cis-trans isomerase8.0e-5691.8Show/hide
Query:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL
        MSSS AAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTV+RDDI+SGKSKFED+ASRISDCSSAKRGGDLGPFGRGQMQKPFEEA F L
Subjt:  MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGL

Query:  KVGEISEIVDTDSGVHIIKRTA
        KVGE+S+IVDTDSGVHIIKR A
Subjt:  KVGEISEIVDTDSGVHIIKRTA

SwissProt top hitse value%identityAlignment
P54353 Putative peptidyl-prolyl cis-trans isomerase dodo3.7e-2653.85Show/hide
Query:  AAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVGEI
        A  +V   H+L+KH+GSRRP+SW+  E  I +  T++ A   L V R+ IV  ++ F+++A   SDCSSAKRGGDLG FGRGQMQ  FE+AAF L V ++
Subjt:  AAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVGEI

Query:  SEIVDTDSGVHIIKRTA
        S IVD+DSG+HII R A
Subjt:  SEIVDTDSGVHIIKRTA

Q94G00 Peptidyl-prolyl cis-trans isomerase Pin11.5e-5184.03Show/hide
Query:  SSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKV
        SS+A  QVRASHILIKHQGSRR ASWKDPEG+II+NTTRDSAVSQL  LRDDI+SGK+KF+D+A+R SDCSSAKRGGDLGPFGR QMQKPFEEA F LKV
Subjt:  SSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKV

Query:  GEISEIVDTDSGVHIIKRT
        GE+S+IVDTDSGVHIIKRT
Subjt:  GEISEIVDTDSGVHIIKRT

Q9LEK8 Peptidyl-prolyl cis-trans isomerase Pin12.0e-4376.99Show/hide
Query:  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVGEISEI
        +VRASHILIKHQGSRR +SWKDP+G +I  TTRD AVSQL  LR +++S  + F D+ASR S CSSAKRGGDLGPFGRGQMQKPFEEA F LKVGEIS+I
Subjt:  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVGEISEI

Query:  VDTDSGVHIIKRT
        VDTDSGVHIIKRT
Subjt:  VDTDSGVHIIKRT

Q9QUR7 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 11.8e-2552.21Show/hide
Query:  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVGEISEI
        +VR SH+L+KH  SRRP+SW+  +       +++ A+  +      I SG+  FE +AS+ SDCSSAK  GDLGPF RGQMQKPFE+A+F L+ GE+S  
Subjt:  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVGEISEI

Query:  VDTDSGVHIIKRT
        V TDSG+HII RT
Subjt:  VDTDSGVHIIKRT

Q9SL42 Peptidyl-prolyl cis-trans isomerase Pin18.5e-4778.95Show/hide
Query:  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVGEISEI
        QV+ASHILIKHQGSRR ASWKDPEG+II  TTR++AV QL  +R+DIVSGK+ FE++A+R+SDCSSAKRGGDLG FGRGQMQKPFEEA + LKVG+IS+I
Subjt:  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVGEISEI

Query:  VDTDSGVHIIKRTA
        VDTDSGVHIIKRTA
Subjt:  VDTDSGVHIIKRTA

Arabidopsis top hitse value%identityAlignment
AT1G26550.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein3.6e-0833.94Show/hide
Query:  VRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVGEISEIV
        V+A H+L + QG    A  K  +G +        A                +F  IA+  S+C S K+GGDLG F RG+M  PF++ AF   VG  S   
Subjt:  VRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVGEISEIV

Query:  DTDSGVHII
         +  G HII
Subjt:  DTDSGVHII

AT2G18040.1 peptidylprolyl cis/trans isomerase, NIMA-interacting 16.0e-4878.95Show/hide
Query:  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVGEISEI
        QV+ASHILIKHQGSRR ASWKDPEG+II  TTR++AV QL  +R+DIVSGK+ FE++A+R+SDCSSAKRGGDLG FGRGQMQKPFEEA + LKVG+IS+I
Subjt:  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVGEISEI

Query:  VDTDSGVHIIKRTA
        VDTDSGVHIIKRTA
Subjt:  VDTDSGVHIIKRTA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCTTCGACGGCCGCCGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAGGGATCGCGGCGGCCTGCTTCATGGAAGGATCCGGAAGGCCGAATTATCAA
GAACACCACTCGCGATAGCGCCGTCTCTCAGCTCACTGTGCTCCGAGACGATATCGTTTCCGGCAAGTCCAAGTTTGAGGACATTGCCTCTCGCATCTCTGACTGCAGCT
CTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGACGTGGCCAGATGCAGAAACCTTTTGAAGAAGCAGCATTTGGCCTCAAGGTTGGAGAGATAAGTGAGATTGTGGAT
ACTGACAGTGGAGTTCACATCATCAAGCGGACTGCT
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCTTCGACGGCCGCCGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAGGGATCGCGGCGGCCTGCTTCATGGAAGGATCCGGAAGGCCGAATTATCAA
GAACACCACTCGCGATAGCGCCGTCTCTCAGCTCACTGTGCTCCGAGACGATATCGTTTCCGGCAAGTCCAAGTTTGAGGACATTGCCTCTCGCATCTCTGACTGCAGCT
CTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGACGTGGCCAGATGCAGAAACCTTTTGAAGAAGCAGCATTTGGCCTCAAGGTTGGAGAGATAAGTGAGATTGTGGAT
ACTGACAGTGGAGTTCACATCATCAAGCGGACTGCT
Protein sequenceShow/hide protein sequence
MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVGEISEIVD
TDSGVHIIKRTA