CuGenDBv2

Gene ID	MS012742
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Genome location	scaffold63:3092722..3095953
RNA-Seq Expression	MS012742
Synteny	MS012742
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6600576.1 hypothetical protein SDJN03_05809, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-85

87.37

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Query:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA
        RPADVISTVSERSEAVDP+LERLKSL+ITTPILQSPPTEGSLTDILVRKPPSS+ A TV+PQ+LLELFS+YR+WQDE+VQKINKNQE IENKIEVTDALA
Subjt:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA

Query:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKL
        VKLLQRLNFSVSAVKTAS+HLSEVHAL+VEIGELKGRLTEVISNCDA+C+RI+SEGPESLR SIKP VVAT    SSCNSSS QVD N NPHPQEPKL
Subjt:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKL

KAG7031216.1 hypothetical protein SDJN02_05256 [Cucurbita argyrosperma subsp. argyrosperma]

2.9e-86

87.88

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Query:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA
        RPADVISTVSERSEAVDP+LERLKSL+ITTPILQSPPTEGSLTDILVRKPPSS+ A TV+PQ+LLELFS+YR+WQDE+VQKINKNQEDIENKIEVTDALA
Subjt:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA

Query:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKL
        VKLLQRLNFSVSAVKTAS+HLSEVHAL+VEIGELKGRLTEVISNCDA+C+RI+SEGPESLR SIKP VVAT    SSCNSSS QVD N NPHPQEPKL
Subjt:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKL

XP_022136885.1 uncharacterized protein LOC111008467 [Momordica charantia]

8.7e-99

100

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Query:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA
        RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA
Subjt:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA

Query:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATRSSCNSSSPQVDSNTNPHPQEPKLD
        VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATRSSCNSSSPQVDSNTNPHPQEPKLD
Subjt:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATRSSCNSSSPQVDSNTNPHPQEPKLD

XP_022942738.1 uncharacterized protein LOC111447685 [Cucurbita moschata]

7.6e-87

88.38

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Query:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA
        RPADVISTVSERSEAVDP+LERLKSL+ITTPILQSPPTEGSLTDILVRKPPSS+ A TV+PQ+LLELFS+YR+WQDE+VQKINKNQEDIENKIEVTDALA
Subjt:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA

Query:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKL
        VKLLQRLNFSVSAVKTAS+HLSEVHAL+VEIGELKGRLTEVISNCDA+C+RI+SEGPESLR SIKP VVAT    SSCNSSS QVD NTNPHPQEPKL
Subjt:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKL

XP_022982715.1 uncharacterized protein LOC111481498 [Cucurbita maxima]

1.7e-86

87.88

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Query:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA
        RPADVISTVSERSEAVDP+LERLKSL+ITTPILQSPPTEGSLTDILVRKPPSS+ A TV+PQ+LLELFS+YR+WQDE+VQKINKNQEDIENKIEVTDALA
Subjt:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA

Query:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKL
        VKLLQRLNFSVSAVKTAS+HLSEVHAL+VEIGELKGRLTEVISNCDA+C+RI+SEGPESLR +IKP VVAT    SSCNSSS QVD NTNPHPQEPKL
Subjt:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BSD9 uncharacterized protein LOC103493183

1.2e-85

87.94

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Query:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA
        R ADVISTVSERSEAVDP+LERLKSLQITTPILQSPPTEGSLTDILVRKPPSS+ A TV+PQ+LLELFS+YR WQDEKVQ+INKNQEDIENKIEVTDALA
Subjt:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA

Query:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKLD
        VKLLQRLNFSVSAVK+ASQHLSEVH+LEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKP V+AT    SSCNSSS QV  +T+PHPQEPKL+
Subjt:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKLD

A0A5D3CYS3 Uncharacterized protein

1.2e-85

87.94

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Query:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA
        R ADVISTVSERSEAVDP+LERLKSLQITTPILQSPPTEGSLTDILVRKPPSS+ A TV+PQ+LLELFS+YR WQDEKVQ+INKNQEDIENKIEVTDALA
Subjt:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA

Query:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKLD
        VKLLQRLNFSVSAVK+ASQHLSEVH+LEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKP V+AT    SSCNSSS QV  +T+PHPQEPKL+
Subjt:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKLD

A0A6J1C569 uncharacterized protein LOC111008467

4.2e-99

100

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Query:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA
        RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA
Subjt:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA

Query:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATRSSCNSSSPQVDSNTNPHPQEPKLD
        VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATRSSCNSSSPQVDSNTNPHPQEPKLD
Subjt:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATRSSCNSSSPQVDSNTNPHPQEPKLD

A0A6J1FVK8 uncharacterized protein LOC111447685

3.7e-87

88.38

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Query:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA
        RPADVISTVSERSEAVDP+LERLKSL+ITTPILQSPPTEGSLTDILVRKPPSS+ A TV+PQ+LLELFS+YR+WQDE+VQKINKNQEDIENKIEVTDALA
Subjt:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA

Query:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKL
        VKLLQRLNFSVSAVKTAS+HLSEVHAL+VEIGELKGRLTEVISNCDA+C+RI+SEGPESLR SIKP VVAT    SSCNSSS QVD NTNPHPQEPKL
Subjt:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKL

A0A6J1J3L4 uncharacterized protein LOC111481498

8.2e-87

87.88

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Query:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA
        RPADVISTVSERSEAVDP+LERLKSL+ITTPILQSPPTEGSLTDILVRKPPSS+ A TV+PQ+LLELFS+YR+WQDE+VQKINKNQEDIENKIEVTDALA
Subjt:  RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALA

Query:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKL
        VKLLQRLNFSVSAVKTAS+HLSEVHAL+VEIGELKGRLTEVISNCDA+C+RI+SEGPESLR +IKP VVAT    SSCNSSS QVD NTNPHPQEPKL
Subjt:  VKLLQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATR---SSCNSSSPQVDSNTNPHPQEPKL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G66290.1 unknown protein

5.3e-62

69.59

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Query:  DVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALAVKL
        DVI+T+S RSE VDP+LE LK+L ++ PIL+SPPTE SLTDILVRK  SS+++ TVDPQIL+ELFS+YR WQ+ K Q+I K QEDIENKIEV DALA KL
Subjt:  DVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALAVKL

Query:  LQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATRSS
        LQR N SVSA++T +QHLS+VH L+VE+GELKGRLTEVISNCD LC+RI SEGPESLRS++ P  +A+  S
Subjt:  LQRLNFSVSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATRSS

Sequences

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CDS sequence

Show/hide CDS sequence

AGGCCAGCTGATGTAATCTCCACCGTGTCGGAGCGATCGGAAGCTGTTGATCCCGTCTTAGAGAGGCTCAAGTCTCTTCAAATTACAACGCCAATATTGCAATCACCCCC
TACGGAAGGTAGCCTTACAGATATCTTAGTGAGGAAACCGCCCTCTTCTACAACTGCTGGTACTGTGGATCCCCAAATTCTTCTGGAGCTCTTCTCAATGTACCGTAGTT
GGCAGGATGAAAAGGTCCAAAAGATCAACAAAAATCAGGAAGATATCGAAAACAAGATTGAAGTCACCGATGCTTTGGCTGTTAAACTTCTTCAACGCTTGAATTTTTCT
GTTTCAGCAGTGAAGACAGCTTCCCAACATCTTTCAGAAGTTCACGCACTGGAAGTGGAAATTGGCGAGCTTAAGGGAAGATTGACAGAGGTTATCAGCAACTGCGATGC
ATTATGCAGAAGAATTGCTTCAGAGGGTCCAGAGTCTCTCCGGTCATCTATCAAGCCGTTAGTAGTCGCCACCAGGTCCTCCTGTAACTCGTCTTCTCCGCAAGTAGATT
CAAATACAAATCCACATCCCCAAGAACCCAAATTAGAT

mRNA sequence

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Protein sequence

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RPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDILVRKPPSSTTAGTVDPQILLELFSMYRSWQDEKVQKINKNQEDIENKIEVTDALAVKLLQRLNFS
VSAVKTASQHLSEVHALEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPLVVATRSSCNSSSPQVDSNTNPHPQEPKLD

MS012742 (gene) of Bitter gourd (TR) v1 genome