; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012758 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012758
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSAP30_Sin3_bdg domain-containing protein
Genome locationscaffold63:3195694..3198129
RNA-Seq ExpressionMS012758
SyntenyMS012758
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0000118 - histone deacetylase complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR024145 - Histone deacetylase complex subunit SAP30/SAP30-like
IPR025718 - Histone deacetylase complex subunit SAP30, Sin3 binding domain
IPR038291 - SAP30, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136860.1 uncharacterized protein LOC111008453 isoform X1 [Momordica charantia]1.0e-11696.52Show/hide
Query:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWL----VLKNGVEVKLQRNALSVLEHPTGNENDDHDFD
        MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWL    VLKNGVEVKLQRNALSVLEHPTGNENDDHDFD
Subjt:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWL----VLKNGVEVKLQRNALSVLEHPTGNENDDHDFD

Query:  NSSCSSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNL----VNSISNASRDQVLH
        NSSCSSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNL    VNSISNASRDQVLH
Subjt:  NSSCSSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNL----VNSISNASRDQVLH

Query:  VVQRHFALQTNLNEASVMTEFIRAVKRRRE
        VVQRHFALQTNLNEASVMTEFIRAVKRRRE
Subjt:  VVQRHFALQTNLNEASVMTEFIRAVKRRRE

XP_022136863.1 uncharacterized protein LOC111008453 isoform X2 [Momordica charantia]1.9e-11898.23Show/hide
Query:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWL----VLKNGVEVKLQRNALSVLEHPTGNENDDHDFD
        MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWL    VLKNGVEVKLQRNALSVLEHPTGNENDDHDFD
Subjt:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWL----VLKNGVEVKLQRNALSVLEHPTGNENDDHDFD

Query:  NSSCSSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQR
        NSSCSSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQR
Subjt:  NSSCSSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQR

Query:  HFALQTNLNEASVMTEFIRAVKRRRE
        HFALQTNLNEASVMTEFIRAVKRRRE
Subjt:  HFALQTNLNEASVMTEFIRAVKRRRE

XP_022136864.1 uncharacterized protein LOC111008453 isoform X3 [Momordica charantia]1.9e-11898.23Show/hide
Query:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC
        MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC
Subjt:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC

Query:  SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNL----VNSISNASRDQVLHVVQR
        SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNL    VNSISNASRDQVLHVVQR
Subjt:  SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNL----VNSISNASRDQVLHVVQR

Query:  HFALQTNLNEASVMTEFIRAVKRRRE
        HFALQTNLNEASVMTEFIRAVKRRRE
Subjt:  HFALQTNLNEASVMTEFIRAVKRRRE

XP_022136865.1 uncharacterized protein LOC111008453 isoform X4 [Momordica charantia]3.5e-120100Show/hide
Query:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC
        MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC
Subjt:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC

Query:  SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFAL
        SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFAL
Subjt:  SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFAL

Query:  QTNLNEASVMTEFIRAVKRRRE
        QTNLNEASVMTEFIRAVKRRRE
Subjt:  QTNLNEASVMTEFIRAVKRRRE

XP_023534417.1 uncharacterized protein LOC111795704 [Cucurbita pepo subsp. pepo]8.0e-10992.41Show/hide
Query:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC
        M+EPEFC+SRIQSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGN+NDDHD DNSSC
Subjt:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC

Query:  SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKL--RVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHF
        SSD+GEKDND SSSIVFHKLSK KVRQIRPWAPSSSAK  TGRGS GEIQSIH+PKL  RVKLGKLGTESLWRYIRHFNLVNSISNASRDQ+LHVVQRHF
Subjt:  SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKL--RVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHF

Query:  ALQTNLNEASVMTEFIRAVKRRRE
        ALQT+LNEASVMTEFIR VKRRRE
Subjt:  ALQTNLNEASVMTEFIRAVKRRRE

TrEMBL top hitse value%identityAlignment
A0A6J1C548 uncharacterized protein LOC111008453 isoform X41.7e-120100Show/hide
Query:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC
        MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC
Subjt:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC

Query:  SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFAL
        SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFAL
Subjt:  SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFAL

Query:  QTNLNEASVMTEFIRAVKRRRE
        QTNLNEASVMTEFIRAVKRRRE
Subjt:  QTNLNEASVMTEFIRAVKRRRE

A0A6J1C5J0 uncharacterized protein LOC111008453 isoform X39.2e-11998.23Show/hide
Query:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC
        MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC
Subjt:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC

Query:  SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNL----VNSISNASRDQVLHVVQR
        SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNL    VNSISNASRDQVLHVVQR
Subjt:  SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNL----VNSISNASRDQVLHVVQR

Query:  HFALQTNLNEASVMTEFIRAVKRRRE
        HFALQTNLNEASVMTEFIRAVKRRRE
Subjt:  HFALQTNLNEASVMTEFIRAVKRRRE

A0A6J1C6L9 uncharacterized protein LOC111008453 isoform X15.1e-11796.52Show/hide
Query:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWL----VLKNGVEVKLQRNALSVLEHPTGNENDDHDFD
        MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWL    VLKNGVEVKLQRNALSVLEHPTGNENDDHDFD
Subjt:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWL----VLKNGVEVKLQRNALSVLEHPTGNENDDHDFD

Query:  NSSCSSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNL----VNSISNASRDQVLH
        NSSCSSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNL    VNSISNASRDQVLH
Subjt:  NSSCSSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNL----VNSISNASRDQVLH

Query:  VVQRHFALQTNLNEASVMTEFIRAVKRRRE
        VVQRHFALQTNLNEASVMTEFIRAVKRRRE
Subjt:  VVQRHFALQTNLNEASVMTEFIRAVKRRRE

A0A6J1C8P1 uncharacterized protein LOC111008453 isoform X29.2e-11998.23Show/hide
Query:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWL----VLKNGVEVKLQRNALSVLEHPTGNENDDHDFD
        MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWL    VLKNGVEVKLQRNALSVLEHPTGNENDDHDFD
Subjt:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWL----VLKNGVEVKLQRNALSVLEHPTGNENDDHDFD

Query:  NSSCSSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQR
        NSSCSSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQR
Subjt:  NSSCSSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQR

Query:  HFALQTNLNEASVMTEFIRAVKRRRE
        HFALQTNLNEASVMTEFIRAVKRRRE
Subjt:  HFALQTNLNEASVMTEFIRAVKRRRE

A0A6J1IZT1 uncharacterized protein LOC1114814241.1e-10891.96Show/hide
Query:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC
        M+EPEFC+SRIQSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGN+NDDHD DNSSC
Subjt:  MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSC

Query:  SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKL--RVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHF
        SSD+GEKDND SSSIVFHKLSK KVRQIRPWAPSSSAK  TGRGS GEIQS H+PKL  RVKLGKLGTESLWRYIRHFNLVNSISNASRDQ+LHVVQRHF
Subjt:  SSDIGEKDNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKL--RVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHF

Query:  ALQTNLNEASVMTEFIRAVKRRRE
        ALQT+LNEASVMTEFIR VKRRRE
Subjt:  ALQTNLNEASVMTEFIRAVKRRRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19330.1 unknown protein9.3e-4751.14Show/hide
Query:  RIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDH-DFDNSSCSSDIGEKD
        +IQS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALSVLE PTGNE DD  DF+N+  +      D
Subjt:  RIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDH-DFDNSSCSSDIGEKD

Query:  NDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQS-----IHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFALQTN
           S       L  HK  ++R    S S+  T  R    + QS          ++V L KL   +L  Y RHFNLV++I N S++Q++ +VQRHF  Q  
Subjt:  NDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQS-----IHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFALQTN

Query:  LNEASVMTEFIRAVKRRRE
        ++E  V+  F++A KR ++
Subjt:  LNEASVMTEFIRAVKRRRE

AT1G19330.2 unknown protein3.2e-4751.36Show/hide
Query:  RIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDH-DFDNSSCS-SDIGEK
        +IQS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALSVLE PTGNE DD  DF+N+  + SD+  +
Subjt:  RIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDH-DFDNSSCS-SDIGEK

Query:  DNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQS-----IHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFALQT
        D           L  HK  ++R    S S+  T  R    + QS          ++V L KL   +L  Y RHFNLV++I N S++Q++ +VQRHF  Q 
Subjt:  DNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQS-----IHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFALQT

Query:  NLNEASVMTEFIRAVKRRRE
         ++E  V+  F++A KR ++
Subjt:  NLNEASVMTEFIRAVKRRRE

AT1G19330.3 unknown protein6.0e-4650.7Show/hide
Query:  RIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDH-DFDNSSCS-SDIGEK
        +IQS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALSVLE PTGNE DD  DF+N+  + SD+   
Subjt:  RIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDH-DFDNSSCS-SDIGEK

Query:  DNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFALQTNLNEA
              ++  HK      R  R    + S  L++   S     +      +V L KL   +L  Y RHFNLV++I N S++Q++ +VQRHF  Q  ++E 
Subjt:  DNDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFALQTNLNEA

Query:  SVMTEFIRAVKRRRE
         V+  F++A KR ++
Subjt:  SVMTEFIRAVKRRRE

AT1G75060.1 unknown protein2.7e-4650.95Show/hide
Query:  SRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSCSSDIGEKD
        S++QS F + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALSVLEHPTGNE +D+D +    +      D
Subjt:  SRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSCSSDIGEKD

Query:  NDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVK--LGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFALQTNLNE
             ++  HK  K   R  R      +        S+ +I SI  P+L +K  L KL   +L RY RHFNLV+++ N +++Q++ ++QRHF  Q  ++E
Subjt:  NDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVK--LGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFALQTNLNE

Query:  ASVMTEFIRA
          V+  F++A
Subjt:  ASVMTEFIRA

AT1G75060.2 unknown protein4.6e-4651.2Show/hide
Query:  SRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSCSSDIGEKD
        S++QS F + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+EVKLQRNALSVLEHPTGNE +D+D +    +      D
Subjt:  SRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSCSSDIGEKD

Query:  NDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLR-VKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFALQTNLNEA
             ++  HK  K   R  R      +        S+ +I SI  P+L  V L KL   +L RY RHFNLV+++ N +++Q++ ++QRHF  Q  ++E 
Subjt:  NDFSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLR-VKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFALQTNLNEA

Query:  SVMTEFIRA
         V+  F++A
Subjt:  SVMTEFIRA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAACCAGAGTTTTGTTCTTCTAGAATACAGTCTCCTTTCCGCGAGGAGAGTGGGGATGAAGAGCTTTCAGTTCTTCCAAGGCACACTAAAGTTATTGTCACTGG
AAATAACAGAACGAAGTCTGTTTTATTGGGATTGCAAGGCGTAGTTAAGAAGGCTGTTGGTCTAGGAGGCTGGCACTGGCTGGTTTTGAAAAATGGGGTTGAAGTGAAGC
TACAAAGGAATGCATTGAGTGTGCTGGAACATCCCACAGGAAACGAGAATGATGATCATGATTTTGACAACTCGAGTTGTAGCTCGGACATTGGTGAGAAGGACAATGAT
TTCTCTAGCAGCATTGTTTTCCACAAGCTTAGCAAACATAAAGTGAGGCAGATAAGGCCATGGGCTCCATCTTCATCGGCAAAGTTGACAACAGGTCGGGGCAGCTATGG
AGAAATTCAGTCAATTCACGTGCCAAAGCTGCGGGTCAAACTGGGGAAACTAGGAACAGAGTCTTTGTGGAGATATATCAGGCACTTCAACCTAGTGAATAGCATTTCAA
ATGCTTCAAGGGACCAAGTCCTTCATGTTGTGCAGCGACATTTTGCGTTACAGACAAATTTGAACGAGGCGTCGGTGATGACTGAATTCATTCGTGCAGTAAAGAGACGA
AGGGAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGAACCAGAGTTTTGTTCTTCTAGAATACAGTCTCCTTTCCGCGAGGAGAGTGGGGATGAAGAGCTTTCAGTTCTTCCAAGGCACACTAAAGTTATTGTCACTGG
AAATAACAGAACGAAGTCTGTTTTATTGGGATTGCAAGGCGTAGTTAAGAAGGCTGTTGGTCTAGGAGGCTGGCACTGGCTGGTTTTGAAAAATGGGGTTGAAGTGAAGC
TACAAAGGAATGCATTGAGTGTGCTGGAACATCCCACAGGAAACGAGAATGATGATCATGATTTTGACAACTCGAGTTGTAGCTCGGACATTGGTGAGAAGGACAATGAT
TTCTCTAGCAGCATTGTTTTCCACAAGCTTAGCAAACATAAAGTGAGGCAGATAAGGCCATGGGCTCCATCTTCATCGGCAAAGTTGACAACAGGTCGGGGCAGCTATGG
AGAAATTCAGTCAATTCACGTGCCAAAGCTGCGGGTCAAACTGGGGAAACTAGGAACAGAGTCTTTGTGGAGATATATCAGGCACTTCAACCTAGTGAATAGCATTTCAA
ATGCTTCAAGGGACCAAGTCCTTCATGTTGTGCAGCGACATTTTGCGTTACAGACAAATTTGAACGAGGCGTCGGTGATGACTGAATTCATTCGTGCAGTAAAGAGACGA
AGGGAG
Protein sequenceShow/hide protein sequence
MMEPEFCSSRIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDDHDFDNSSCSSDIGEKDND
FSSSIVFHKLSKHKVRQIRPWAPSSSAKLTTGRGSYGEIQSIHVPKLRVKLGKLGTESLWRYIRHFNLVNSISNASRDQVLHVVQRHFALQTNLNEASVMTEFIRAVKRR
RE