; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012784 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012784
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Genome locationscaffold63:3411170..3415161
RNA-Seq ExpressionMS012784
SyntenyMS012784
Gene Ontology termsGO:0015995 - chlorophyll biosynthetic process (biological process)
GO:0016117 - carotenoid biosynthetic process (biological process)
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (biological process)
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR003526 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
IPR020555 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site
IPR036571 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600551.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.0e-10586.55Show/hide
Query:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNF-ALSSSSSPPAIRVTSAA--AAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLI
        MAVP P FAS  T  AT SHQSLSLS++PR+FPR NF  +SSSSS P+IRV SAA  + E  TA+ S  AAASDSRSKALPFR+GHGFDLHRLEPGYPLI
Subjt:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNF-ALSSSSSPPAIRVTSAA--AAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLI

Query:  IGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSEL
        IGGINIPH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS L
Subjt:  IGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSEL

Query:  LGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        LGADP VVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  LGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

XP_022136770.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Momordica charantia]1.0e-12599.15Show/hide
Query:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNFALSSSSSPPAIRVTSAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGG
        MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRR FALSSSSSPPAIRVTSAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGG
Subjt:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNFALSSSSSPPAIRVTSAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGG

Query:  INIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGA
        INIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIR NLSELLGA
Subjt:  INIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGA

Query:  DPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        DPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  DPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

XP_022942995.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucurbita moschata]9.7e-10586.13Show/hide
Query:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNF-ALSSSSSPPAIRVTSAA--AAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLI
        MAVP P FAS  T  AT SHQSLSLS++PR+FPR NF  +SSSSS P+IRV SAA  + E  TA+ S  AAASDSRSKALPFR+GHGFDLHRLEPGYPLI
Subjt:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNF-ALSSSSSPPAIRVTSAA--AAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLI

Query:  IGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSEL
        IGGINIPH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS+L
Subjt:  IGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSEL

Query:  LGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        LGAD  VVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  LGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

XP_022982530.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucurbita maxima]2.8e-10485.71Show/hide
Query:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNF-ALSSSSSPPAIRVTSAA--AAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLI
        MAVP P FAS  T  AT SHQSLSLS++PR+FPR NF  +SSSSS P+IRV SAA  + +  TA+ S  AAASDSRSKALPFR+GHGFDLHRLEPGYPLI
Subjt:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNF-ALSSSSSPPAIRVTSAA--AAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLI

Query:  IGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSEL
        IGGINIPH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS L
Subjt:  IGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSEL

Query:  LGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        LGAD  VVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  LGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

XP_023548820.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]2.6e-10586.13Show/hide
Query:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNF-ALSSSSSPPAIRVTSAA--AAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLI
        MAVP P FAS  T  AT SHQSLSLS++PR+FPR NF  +SSSSS P+IRV SAA  + E  TA+ S  AAASDSRSKALPFR+GHGFDLHRLEPGYPLI
Subjt:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNF-ALSSSSSPPAIRVTSAA--AAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLI

Query:  IGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSEL
        IGGINIPH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMH+AGY+IGNLDATLILQRPKLSPHKEAIRANLS+L
Subjt:  IGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSEL

Query:  LGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        LGADP VVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  LGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

TrEMBL top hitse value%identityAlignment
A0A1S3BTZ8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase9.2e-10184.75Show/hide
Query:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNFA-LSSSSSPPAIRVTSAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIG
        MAV APFFASP   AAT SHQS SLS +P +FPRR F  LSSSSS P+ RV SA     + ++ S  A  SDS SK LPFRVGHGFDLHRLEPGYPLIIG
Subjt:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNFA-LSSSSSPPAIRVTSAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIG

Query:  GINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG
        GI+IPH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG
Subjt:  GINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG

Query:  ADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        ADP VVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A5D3D287 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase9.2e-10184.75Show/hide
Query:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNFA-LSSSSSPPAIRVTSAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIG
        MAV APFFASP   AAT SHQS SLS +P +FPRR F  LSSSSS P+ RV SA     + ++ S  A  SDS SK LPFRVGHGFDLHRLEPGYPLIIG
Subjt:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNFA-LSSSSSPPAIRVTSAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIG

Query:  GINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG
        GI+IPH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG
Subjt:  GINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG

Query:  ADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        ADP VVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A6J1C4W9 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase4.8e-12699.15Show/hide
Query:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNFALSSSSSPPAIRVTSAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGG
        MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRR FALSSSSSPPAIRVTSAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGG
Subjt:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNFALSSSSSPPAIRVTSAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGG

Query:  INIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGA
        INIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIR NLSELLGA
Subjt:  INIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGA

Query:  DPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        DPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  DPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A6J1FX89 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase4.7e-10586.13Show/hide
Query:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNF-ALSSSSSPPAIRVTSAA--AAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLI
        MAVP P FAS  T  AT SHQSLSLS++PR+FPR NF  +SSSSS P+IRV SAA  + E  TA+ S  AAASDSRSKALPFR+GHGFDLHRLEPGYPLI
Subjt:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNF-ALSSSSSPPAIRVTSAA--AAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLI

Query:  IGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSEL
        IGGINIPH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS+L
Subjt:  IGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSEL

Query:  LGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        LGAD  VVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  LGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A6J1J2X8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1.4e-10485.71Show/hide
Query:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNF-ALSSSSSPPAIRVTSAA--AAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLI
        MAVP P FAS  T  AT SHQSLSLS++PR+FPR NF  +SSSSS P+IRV SAA  + +  TA+ S  AAASDSRSKALPFR+GHGFDLHRLEPGYPLI
Subjt:  MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNF-ALSSSSSPPAIRVTSAA--AAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLI

Query:  IGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSEL
        IGGINIPH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS L
Subjt:  IGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSEL

Query:  LGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        LGAD  VVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  LGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

SwissProt top hitse value%identityAlignment
Q1LLZ4 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2.9e-4353.21Show/hide
Query:  RVGHGFDLHRLEPGYPLIIGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQ
        R+G G+D+H L PG  LI+GG++IPH+RG   HSD D LLH V DA+ GA  L DIG+ FPD+DP + GA S V ++EAVR + EAGY+IGN+DAT+I Q
Subjt:  RVGHGFDLHRLEPGYPLIIGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQ

Query:  RPKLSPHKEAIRANLSELLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        +PKL+PH   + ANL+E LG      N+KAKT+EK+   G+   I A   VL+ RR
Subjt:  RPKLSPHKEAIRANLSELLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Q2NAE1 Bifunctional enzyme IspD/IspF3.8e-4347.31Show/hide
Query:  ASDSRSKALPFRVGHGFDLHRLEPGYPLIIGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYD
        A D  +  LP RVG GFD+H+LE G  L +GGI + H++G   HSD DV LH +VDA+LGA+G  DIG  FP SDP+WKGA SS FI+ A +L+ EAGY 
Subjt:  ASDSRSKALPFRVGHGFDLHRLEPGYPLIIGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYD

Query:  IGNLDATLILQRPKLSPHKEAIRANLSELLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        +GN+D T+I + P++ PH++A+   ++ELL   P  +++KA T EK+   G    IAA     ++R+
Subjt:  IGNLDATLILQRPKLSPHKEAIRANLSELLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Q6EPN6 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic6.0e-8168.24Show/hide
Query:  FFASPATAAATPSHQSLSLSMFPRTFPRRNFALSSSSSPPAIRV----TSAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGGIN
        F ASP   A T   +S                 S+S + P++R+    T AAAA      +  PA A+  +  ALPFRVGHGFDLHRLEPG PLIIGGI+
Subjt:  FFASPATAAATPSHQSLSLSMFPRTFPRRNFALSSSSSPPAIRV----TSAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGGIN

Query:  IPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADP
        IPH+RGC+AHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDP+WKGA SSVF++EAV+LMHEAGY++GNLDATLILQ+PK+SP KE IR+NL +LLGADP
Subjt:  IPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADP

Query:  CVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
         VVNLKAKTHEKVDSLGENRSIAAHTVVLLMR+
Subjt:  CVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Q9CAK8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic5.8e-8481.52Show/hide
Query:  SAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPS
        SA+ +  ++A+    +  S+  +K LPFR+GHGFDLHRLEPGYPLIIGGI IPH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA S
Subjt:  SAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPS

Query:  SVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        SVFIKEAVRLM EAGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADP VVNLKAKTHEKVDSLGENRSIAAHTV+LLM++
Subjt:  SVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Q9M4W3 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic1.0e-8571.06Show/hide
Query:  AAATPSHQSLSLSMFPRTFPRRNFALS----SSSSPPAIRVTS---------AAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGG
        A AT  + S ++        R NF  S    S ++P  IR+++          +AA    A+++ P  A+ + SK L FRVGHGFDLHRLEPGYPLIIGG
Subjt:  AAATPSHQSLSLSMFPRTFPRRNFALS----SSSSPPAIRVTS---------AAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGG

Query:  INIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGA
        INIPH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPD+DPKWKGAPSSVFIKEAVRLM EAGY++GNLDATLILQRPK+SPHKEAIR NL +LLGA
Subjt:  INIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGA

Query:  DPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        DPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMR+
Subjt:  DPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Arabidopsis top hitse value%identityAlignment
AT1G63970.1 isoprenoid F4.1e-8581.52Show/hide
Query:  SAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPS
        SA+ +  ++A+    +  S+  +K LPFR+GHGFDLHRLEPGYPLIIGGI IPH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA S
Subjt:  SAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPS

Query:  SVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        SVFIKEAVRLM EAGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADP VVNLKAKTHEKVDSLGENRSIAAHTV+LLM++
Subjt:  SVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

AT1G63970.2 isoprenoid F1.1e-7777.17Show/hide
Query:  SAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPS
        SA+ +  ++A+    +  S+  +K LPFR+GHGFDLHRLEPGYPLIIGGI IPH+RGCEAHSD        VDAILGALGLPDIGQIFPDSDPKWKGA S
Subjt:  SAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPS

Query:  SVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        SVFIKEAVRLM EAGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADP VVNLKAKTHEKVDSLGENRSIAAHTV+LLM++
Subjt:  SVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTGCCCGCCCCCTTCTTCGCCTCTCCGGCCACCGCCGCCGCCACTCCCTCCCACCAATCCCTTTCCCTTTCCATGTTTCCCCGTACCTTCCCCAGAAGAAATTT
CGCTCTTTCATCCTCCTCTTCCCCACCGGCCATCCGGGTCACCTCCGCCGCAGCTGCGGAGCCCACCACCGCCCTCCAATCTGGTCCCGCCGCGGCATCCGATTCTCGGT
CTAAAGCCCTTCCGTTTCGGGTTGGACATGGGTTCGATCTTCATAGGCTGGAGCCTGGATATCCTTTGATTATTGGGGGAATTAATATTCCCCACGAGAGAGGCTGCGAG
GCTCATTCTGATGGGGATGTTCTACTTCACTGCGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGACATTGGACAGATCTTTCCAGATTCAGATCCCAAATGGAA
GGGTGCTCCATCATCTGTTTTTATTAAAGAAGCTGTGAGACTGATGCATGAGGCAGGTTATGACATAGGAAACTTGGATGCCACATTGATACTTCAAAGACCAAAGCTTA
GCCCTCACAAGGAAGCCATCAGAGCAAACCTGTCCGAGCTTCTGGGAGCCGACCCATGTGTCGTGAATCTGAAGGCAAAAACGCACGAGAAAGTCGACAGCCTTGGCGAA
AACAGAAGCATTGCCGCTCACACTGTGGTTCTCCTGATGAGGAGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTGCCCGCCCCCTTCTTCGCCTCTCCGGCCACCGCCGCCGCCACTCCCTCCCACCAATCCCTTTCCCTTTCCATGTTTCCCCGTACCTTCCCCAGAAGAAATTT
CGCTCTTTCATCCTCCTCTTCCCCACCGGCCATCCGGGTCACCTCCGCCGCAGCTGCGGAGCCCACCACCGCCCTCCAATCTGGTCCCGCCGCGGCATCCGATTCTCGGT
CTAAAGCCCTTCCGTTTCGGGTTGGACATGGGTTCGATCTTCATAGGCTGGAGCCTGGATATCCTTTGATTATTGGGGGAATTAATATTCCCCACGAGAGAGGCTGCGAG
GCTCATTCTGATGGGGATGTTCTACTTCACTGCGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGACATTGGACAGATCTTTCCAGATTCAGATCCCAAATGGAA
GGGTGCTCCATCATCTGTTTTTATTAAAGAAGCTGTGAGACTGATGCATGAGGCAGGTTATGACATAGGAAACTTGGATGCCACATTGATACTTCAAAGACCAAAGCTTA
GCCCTCACAAGGAAGCCATCAGAGCAAACCTGTCCGAGCTTCTGGGAGCCGACCCATGTGTCGTGAATCTGAAGGCAAAAACGCACGAGAAAGTCGACAGCCTTGGCGAA
AACAGAAGCATTGCCGCTCACACTGTGGTTCTCCTGATGAGGAGA
Protein sequenceShow/hide protein sequence
MAVPAPFFASPATAAATPSHQSLSLSMFPRTFPRRNFALSSSSSPPAIRVTSAAAAEPTTALQSGPAAASDSRSKALPFRVGHGFDLHRLEPGYPLIIGGINIPHERGCE
AHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPCVVNLKAKTHEKVDSLGE
NRSIAAHTVVLLMRR