; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012820 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012820
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold63:3709493..3709960
RNA-Seq ExpressionMS012820
SyntenyMS012820
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600527.1 hypothetical protein SDJN03_05760, partial [Cucurbita argyrosperma subsp. sororia]8.8e-5480Show/hide
Query:  NHKPKS-LVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPP--SVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQPKDG
        NH P S  VWDCGS+LYDSFELNSFK HLDSA+ASR+LSMPHL DR  PPPP PP   VP SK SSK SRSL KLLRSLFRPK NS  SIFRA+DQPKDG
Subjt:  NHKPKS-LVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPP--SVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQPKDG

Query:  FYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGIS
        FYVFYEVGSLSTIPEVPEADF    SPEIGSLV+KTASERF  ANSLGIS
Subjt:  FYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGIS

KAG7031166.1 hypothetical protein SDJN02_05206, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-5480.67Show/hide
Query:  NHKPKS-LVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPP--SVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQPKDG
        NH P S  VWDCGS+LYDSFELNSFK HLDSAIASR+LSMPHL DR  PPPP PP   VP SK SSK SRSL KLLRSLFRPK NS  SIFRA+DQPKDG
Subjt:  NHKPKS-LVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPP--SVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQPKDG

Query:  FYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGIS
        FYVFYEVGSLSTIPEVPEADF    SPEIGSLV+KTASERF  ANSLGIS
Subjt:  FYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGIS

XP_022136867.1 uncharacterized protein LOC111008455 [Momordica charantia]3.2e-80100Show/hide
Query:  MANKLENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQP
        MANKLENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQP
Subjt:  MANKLENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQP

Query:  KDGFYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGISCA
        KDGFYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGISCA
Subjt:  KDGFYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGISCA

XP_022942039.1 uncharacterized protein LOC111447227 [Cucurbita moschata]8.8e-5480.41Show/hide
Query:  NHKPKS-LVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQPKDGFY
        NH P S  VWDCGS+LYDSFELNSFK HLDSAIASR+LSMPHL DR  PPPP    VP SK SSK SRSL KLLRSLFRPK NS  SIFRA+DQPKDGFY
Subjt:  NHKPKS-LVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQPKDGFY

Query:  VFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGIS
        VFYEVGSLSTIPEVPEADF    SPEIGSLV+KTASERF  ANSLGIS
Subjt:  VFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGIS

XP_023544229.1 uncharacterized protein LOC111803865 [Cucurbita pepo subsp. pepo]4.7e-5581.33Show/hide
Query:  NHKPKS-LVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPP--SVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQPKDG
        NH P S  VWDCGS+LYDSFELNSFK HLDSAIASR+LSMPHL DR  PPPPLPP   VP SK SSK SRSL KLLRSLFRPK NS  SIFRA+DQPKDG
Subjt:  NHKPKS-LVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPP--SVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQPKDG

Query:  FYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGIS
        FYVFYEVGSLSTIPEVPEADF    SPEIGSLV+KTASERF  ANSLGIS
Subjt:  FYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGIS

TrEMBL top hitse value%identityAlignment
A0A1S3BTI3 uncharacterized protein LOC1034931072.2e-5071.79Show/hide
Query:  ENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRG-------PPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQD
        ENH   S  WDC S+LYDSFELNSFK HLDSAIASR+ SMPHL    G       P PP P +   SK SSKFSRS SK+LRSLFRPKPNS   IFRAQD
Subjt:  ENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRG-------PPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQD

Query:  QPKDGFYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGISC
        QP+DGFYVFYEVGSLSTIPEVPEADF    SPEI SLVKKTASERF   NS+GISC
Subjt:  QPKDGFYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGISC

A0A5D3CYZ1 Putative inactive serine/threonine-protein kinase slob1 isoform X12.2e-5071.79Show/hide
Query:  ENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRG-------PPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQD
        ENH   S  WDC S+LYDSFELNSFK HLDSAIASR+ SMPHL    G       P PP P +   SK SSKFSRS SK+LRSLFRPKPNS   IFRAQD
Subjt:  ENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRG-------PPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQD

Query:  QPKDGFYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGISC
        QP+DGFYVFYEVGSLSTIPEVPEADF    SPEI SLVKKTASERF   NS+GISC
Subjt:  QPKDGFYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGISC

A0A6J1C6M4 uncharacterized protein LOC1110084551.6e-80100Show/hide
Query:  MANKLENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQP
        MANKLENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQP
Subjt:  MANKLENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQP

Query:  KDGFYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGISCA
        KDGFYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGISCA
Subjt:  KDGFYVFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGISCA

A0A6J1FQ62 uncharacterized protein LOC1114472274.3e-5480.41Show/hide
Query:  NHKPKS-LVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQPKDGFY
        NH P S  VWDCGS+LYDSFELNSFK HLDSAIASR+LSMPHL DR  PPPP    VP SK SSK SRSL KLLRSLFRPK NS  SIFRA+DQPKDGFY
Subjt:  NHKPKS-LVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQPKDGFY

Query:  VFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGIS
        VFYEVGSLSTIPEVPEADF    SPEIGSLV+KTASERF  ANSLGIS
Subjt:  VFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGIS

A0A6J1JF52 uncharacterized protein LOC1114863402.0e-5179.05Show/hide
Query:  NHKPKS-LVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQPKDGFY
        NH P S  VWDCGS+LYDSFELNSFK  LDSAIASR+LSMPHL DR  PPP     VP SK SSK SRSL KLLRSLFRPK NS  SIFRA+DQPKDGFY
Subjt:  NHKPKS-LVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQPKDGFY

Query:  VFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGIS
        VFYEVGSLSTIPEVPEADF    SPEIGSLV+KTASERF  ANSLGIS
Subjt:  VFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64340.1 unknown protein9.5e-2246.62Show/hide
Query:  NKLENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAIAS--RSLSMPHLPDRRGPPPPLPPSVPTSK----PSSKFSRSLSKLLRSLFRPKPNSTASIFRA
        +K++N K    VWDC STLYDSFELNSF   L+SAI+S  RS+SMPHL     PPPP   +  ++K    P+ K SRSL KL++S+F+ K ++       
Subjt:  NKLENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAIAS--RSLSMPHLPDRRGPPPPLPPSVPTSK----PSSKFSRSLSKLLRSLFRPKPNSTASIFRA

Query:  QDQPKDGFY-VFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASER
             D +Y VF + GSL+TIPE  E+        EI SLV+KT SER
Subjt:  QDQPKDGFY-VFYEVGSLSTIPEVPEADFAPSFSPEIGSLVKKTASER

AT5G41810.1 unknown protein3.8e-3147.8Show/hide
Query:  NKLENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAI---ASRSLSMPHLPDRRGP---------PPPLPPSVPTS--------KPSSKFSRSLSKLLRSL
        + +++ K  S VWDCGSTLYDSFELNSFK  LDSAI   ++R++SM HLPDRR P          PPLPP   TS        K S+K SRSL + L+S+
Subjt:  NKLENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAI---ASRSLSMPHLPDRRGP---------PPPLPPSVPTS--------KPSSKFSRSLSKLLRSL

Query:  FRPKPNS-----TASIFRAQDQ---PKDGFYVFYE-VGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGISCA
        F+PK +      ++ +++A       KD +YV Y+  GSL+TIPE  E +     SPEI SLV+KT SERF A+  +GISCA
Subjt:  FRPKPNS-----TASIFRAQDQ---PKDGFYVFYE-VGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGISCA

AT5G41810.2 unknown protein3.8e-3147.8Show/hide
Query:  NKLENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAI---ASRSLSMPHLPDRRGP---------PPPLPPSVPTS--------KPSSKFSRSLSKLLRSL
        + +++ K  S VWDCGSTLYDSFELNSFK  LDSAI   ++R++SM HLPDRR P          PPLPP   TS        K S+K SRSL + L+S+
Subjt:  NKLENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAI---ASRSLSMPHLPDRRGP---------PPPLPPSVPTS--------KPSSKFSRSLSKLLRSL

Query:  FRPKPNS-----TASIFRAQDQ---PKDGFYVFYE-VGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGISCA
        F+PK +      ++ +++A       KD +YV Y+  GSL+TIPE  E +     SPEI SLV+KT SERF A+  +GISCA
Subjt:  FRPKPNS-----TASIFRAQDQ---PKDGFYVFYE-VGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGISCA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAATGGCAAACAAATTAGAGAATCACAAGCCAAAATCTCTTGTGTGGGATTGTGGAAGCACTCTCTATGATTCCTTTGAGCTCAACTCTTTCAAACACCACCTTGACTC
CGCCATAGCCTCTAGATCTCTCTCCATGCCTCACTTACCCGACCGCCGTGGCCCTCCGCCCCCGCTCCCCCCCTCCGTGCCCACGTCCAAGCCTTCTTCCAAGTTTTCCC
GCTCCCTCTCCAAACTCCTCCGCTCGCTTTTTCGCCCCAAGCCTAACTCCACCGCCTCTATTTTTCGGGCTCAAGATCAACCCAAAGATGGATTTTACGTGTTTTATGAA
GTCGGTTCGCTCTCGACGATCCCCGAGGTCCCCGAGGCCGACTTCGCACCCAGTTTCTCGCCGGAGATCGGCTCTTTGGTGAAGAAGACGGCGTCTGAGAGGTTTGCGGC
GGCCAACTCCCTTGGCATCTCGTGTGCT
mRNA sequenceShow/hide mRNA sequence
AAAATGGCAAACAAATTAGAGAATCACAAGCCAAAATCTCTTGTGTGGGATTGTGGAAGCACTCTCTATGATTCCTTTGAGCTCAACTCTTTCAAACACCACCTTGACTC
CGCCATAGCCTCTAGATCTCTCTCCATGCCTCACTTACCCGACCGCCGTGGCCCTCCGCCCCCGCTCCCCCCCTCCGTGCCCACGTCCAAGCCTTCTTCCAAGTTTTCCC
GCTCCCTCTCCAAACTCCTCCGCTCGCTTTTTCGCCCCAAGCCTAACTCCACCGCCTCTATTTTTCGGGCTCAAGATCAACCCAAAGATGGATTTTACGTGTTTTATGAA
GTCGGTTCGCTCTCGACGATCCCCGAGGTCCCCGAGGCCGACTTCGCACCCAGTTTCTCGCCGGAGATCGGCTCTTTGGTGAAGAAGACGGCGTCTGAGAGGTTTGCGGC
GGCCAACTCCCTTGGCATCTCGTGTGCT
Protein sequenceShow/hide protein sequence
KMANKLENHKPKSLVWDCGSTLYDSFELNSFKHHLDSAIASRSLSMPHLPDRRGPPPPLPPSVPTSKPSSKFSRSLSKLLRSLFRPKPNSTASIFRAQDQPKDGFYVFYE
VGSLSTIPEVPEADFAPSFSPEIGSLVKKTASERFAAANSLGISCA