; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012821 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012821
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein SEH1
Genome locationscaffold63:3713379..3718270
RNA-Seq ExpressionMS012821
SyntenyMS012821
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0034198 - cellular response to amino acid starvation (biological process)
GO:1904263 - positive regulation of TORC1 signaling (biological process)
GO:0031080 - nuclear pore outer ring (cellular component)
GO:0035859 - Seh1-associated complex (cellular component)
GO:0005198 - structural molecule activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR037363 - Sec13/Seh1 family
IPR037597 - Nucleoporin Seh1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600526.1 Protein SEH1, partial [Cucurbita argyrosperma subsp. sororia]1.5e-17290.52Show/hide
Query:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        ME AMA+FDKGT+CSAWNYSASRL T S DGT+VIFDS DPSSSSTSLTRTSNFKAHEAAI KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL
        L K FKSNS+Q++DIQFGNSSSGLKMIAAFSDG+VKVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGERQQSSFVLA  S+TPQL
Subjt:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQNIGRPYEVIAVATQKG+AIW LG NPD DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_008451932.1 PREDICTED: protein SEH1 [Cucumis melo]1.0e-17391.74Show/hide
Query:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        ME AMA+FDKGTLCSAWN+S+SRLATAS DGTLVIFDSP PSSSSTSLTRTSNFKAHEAAI KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WK
Subjt:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL
        LCK FKSNS+Q+LD+QFGNSSSGLKMIAAFSDG++KVYELMDPLDLK+WQLQAEFQNVIDSISTVRK+SC SASISWNPHRGE QQSSFVLA +SNTPQL
Subjt:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPVAELAL A+KGDEVYAVAWAQNIGRPYEVIAVATQ+GIAIW LG +PD DGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_022136602.1 protein SEH1 [Momordica charantia]2.4e-18698.78Show/hide
Query:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        ME+AMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL
        LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFS  HVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL
Subjt:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQ AAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_023547085.1 protein SEH1 [Cucurbita pepo subsp. pepo]1.5e-17290.83Show/hide
Query:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        ME AMA+FDKGT+CSAWNYSASRL T S DGT+VIFDS DPSSSSTSLTRTSNFK HEAAI KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL
        L K FKSNS+Q+LDIQFGNSSSGLKMIAAFSDG+VKVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGERQQSSFVLA +S+TPQL
Subjt:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQNIGRPYEVIAVATQKGIAIW LG NPD DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_038897768.1 protein SEH1 [Benincasa hispida]3.0e-17391.44Show/hide
Query:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        ME AMA+  KGTLCSAWNYSA+RLAT S DGTL+IFDSPDPSSSSTSLTRTSNFK HEAAI+KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL
        LCK FK NS+Q+LDIQFGNSSSGLKMIAAFSDGH+KVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA C SASISWNPHRGE QQ SFVLA +SNTPQL
Subjt:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPVAELAL ADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIW LG +PD DGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHA FEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ8 WD_REPEATS_REGION domain-containing protein3.6e-17290.52Show/hide
Query:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        ME AMA+F KGTLCSAWNYS++RLATAS DGTLVIFDSP PSSSSTS T TSNFKAHE AI KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL
        LCK FKSNS+Q+LD+QFGNSSSGLKMIAAFSDG++KVYELMDPL+LKNWQLQAEFQNVIDSISTVRK+SC SASISWNPHRGE QQSSFV+A +SNTPQL
Subjt:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAH RWLPVAELAL A+KGDEVYAVAWAQNIGRPYEVIAVATQ+GIAIWHLG +PDMDGRLS ERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A1S3BTS7 protein SEH15.1e-17491.74Show/hide
Query:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        ME AMA+FDKGTLCSAWN+S+SRLATAS DGTLVIFDSP PSSSSTSLTRTSNFKAHEAAI KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WK
Subjt:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL
        LCK FKSNS+Q+LD+QFGNSSSGLKMIAAFSDG++KVYELMDPLDLK+WQLQAEFQNVIDSISTVRK+SC SASISWNPHRGE QQSSFVLA +SNTPQL
Subjt:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPVAELAL A+KGDEVYAVAWAQNIGRPYEVIAVATQ+GIAIW LG +PD DGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1C5X6 protein SEH11.2e-18698.78Show/hide
Query:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        ME+AMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL
        LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFS  HVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL
Subjt:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQ AAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1FTY0 protein SEH11.2e-17290.52Show/hide
Query:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        ME AMA+FDKGT+CSAWNYSASRL T S DGT+VIFDS DPSSSSTSLTRTSNFKAHEAAI KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL
        L K FKSNS+Q++DIQFGNSSSGLKMIAAFSDG++KVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGERQQSSFVLA  S+TPQL
Subjt:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQNIGRPYEVIAVATQKGIAIW LG NPD DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1J2X1 protein SEH16.2e-17290.21Show/hide
Query:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        ME AMA+FDKGT+CSAWNYSASRL T S DGT+V+FDS DPSSSSTSLTRTSNFKAHEAAI KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL
        L K FKSNS+Q+LDIQFGNSSSGLKMIAAFSDG+VKVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGERQQSSFVLA  S+TPQL
Subjt:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFD+AHQRWLPVAELAL ADKGD VYAVAWAQNIGRPYEVIAVATQKGIAIW LG NPD DGRLSTERVALLSGHN EVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

SwissProt top hitse value%identityAlignment
C1BK83 Nucleoporin SEH19.9e-3428.12Show/hide
Query:  AWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQ-----WKLCKRFKSNSA
        ++++   R+AT S D ++ ++D  D    +     T+++K H  ++ ++ W  PE+G  +A    D T+++WEE+V ++   Q     W        +  
Subjt:  AWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQ-----WKLCKRFKSNSA

Query:  QMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAL-NSNTPQLNSAKVWEFD
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           +   +SNT      +++E+ 
Subjt:  QMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAL-NSNTPQLNSAKVWEFD

Query:  QAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHL-----GSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDG
        +  +++  V  L       D V+ +A+A N+GR + V+A+AT K + I+ L      S+     +L  +  A   GHN +VW + W++    LAS+G DG
Subjt:  QAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHL-----GSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDG

Query:  MVRLWQSNLNGVW
         VRLW++N    W
Subjt:  MVRLWQSNLNGVW

Q4FZW5 Nucleoporin SEH1-A2.4e-3226.43Show/hide
Query:  AWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSA
        ++++   R+AT S D ++ ++D     S + +   T+++K H  ++ ++ W  PE+G  +A    D T+++WEE+V ++         W        +  
Subjt:  AWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSA

Query:  QMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQ-LNSAKVWEFD
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           +  + ++P  +   +++E++
Subjt:  QMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQ-LNSAKVWEFD

Query:  QAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLG------SNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD
        +  +++     L       D V+ +A+A N+GR + ++AVAT K + I+ +       S+     +     VA    HN +VW + W++ G  LAS+G D
Subjt:  QAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLG------SNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD

Query:  GMVRLWQSNLNGVW
        G VRLW++N    W
Subjt:  GMVRLWQSNLNGVW

Q5U4Y8 Nucleoporin SEH13.2e-3226.43Show/hide
Query:  AWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSA
        ++++   R+AT S D ++ ++D     S +     T+++K H  ++ ++ W  PE+G  +A    D T+++WEE+V ++         W        +  
Subjt:  AWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSA

Query:  QMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQ-LNSAKVWEFD
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           +  + ++P  +   +++E++
Subjt:  QMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQ-LNSAKVWEFD

Query:  QAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLG------SNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD
        +  +++     L       D V+ +A+A N+GR + ++AVAT K + I+ +       S+     +     VA    HN +VW + W++ G  LAS+G D
Subjt:  QAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLG------SNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD

Query:  GMVRLWQSNLNGVW
        G VRLW++N    W
Subjt:  GMVRLWQSNLNGVW

Q6GNF1 Nucleoporin SEH1-B1.1e-3226.43Show/hide
Query:  AWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSA
        ++++   R+AT S D ++ ++D     S + +   T+++K H  ++ ++ W  PE+G  +A    D T+++WEE+V ++         W        +  
Subjt:  AWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSA

Query:  QMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQ-LNSAKVWEFD
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           +  + ++P  +   +++E++
Subjt:  QMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQ-LNSAKVWEFD

Query:  QAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLG------SNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD
        +  +++     L       D V+ +A+A N+GR + ++AVAT K + I+ +       S+     +     VA    HN +VW + W++ G  LAS+G D
Subjt:  QAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLG------SNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD

Query:  GMVRLWQSNLNGVW
        G VRLW++N    W
Subjt:  GMVRLWQSNLNGVW

Q93VR9 Protein SEH11.2e-12763.69Show/hide
Query:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        M  +MA+ D GT CS+WN S  RLA  S++G L I++S   +SSS++ + TS  +  E++I+KIVW+P EYGD+VAC+C DG+ S+WEE+ EDA  L+WK
Subjt:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL
        LCK  K+ S+Q+LD+QFG S   LKM+AA+SDG+++V+EL++PL+LKNWQLQAEFQNVIDS+ST+ K S LSAS+SWNP +GE Q+ SFVLA NS++P L
Subjt:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NS+K+WEFD+AH RWL VAELALP DKGD VYA++WA NIGRPYEV+AVAT KGI IWH+G  PD++GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEP
        G DGMV+LWQSNLNG WH+ A  EP
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEP

Arabidopsis top hitse value%identityAlignment
AT1G64350.1 Transducin/WD40 repeat-like superfamily protein8.4e-12963.69Show/hide
Query:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        M  +MA+ D GT CS+WN S  RLA  S++G L I++S   +SSS++ + TS  +  E++I+KIVW+P EYGD+VAC+C DG+ S+WEE+ EDA  L+WK
Subjt:  MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL
        LCK  K+ S+Q+LD+QFG S   LKM+AA+SDG+++V+EL++PL+LKNWQLQAEFQNVIDS+ST+ K S LSAS+SWNP +GE Q+ SFVLA NS++P L
Subjt:  LCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NS+K+WEFD+AH RWL VAELALP DKGD VYA++WA NIGRPYEV+AVAT KGI IWH+G  PD++GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEP
        G DGMV+LWQSNLNG WH+ A  EP
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATGCTATGGCGAGCTTCGATAAAGGCACCCTCTGCTCAGCTTGGAACTACTCCGCCAGCAGATTAGCCACCGCCTCGGTCGACGGAACCCTCGTCATCTTCGA
TTCCCCCGATCCTTCTTCTTCATCCACGTCCCTCACTCGCACTTCAAACTTTAAGGCACATGAGGCTGCCATTTTAAAGATAGTTTGGGTTCCTCCAGAGTATGGTGATT
CAGTTGCATGCATTTGTTCAGATGGAACTTCATCATTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCTCTACAGTGGAAGCTATGCAAACGCTTTAAAAGTAATTCAGCC
CAAATGCTAGACATCCAATTTGGAAATTCGTCCTCTGGTCTGAAAATGATTGCTGCATTTTCAGATGGCCATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAA
GAATTGGCAACTCCAGGCTGAATTTCAGAATGTTATTGATTCCATTTCTACGGTTAGGAAAGCTTCTTGCTTATCTGCAAGTATATCTTGGAATCCACATCGAGGTGAAA
GACAACAATCGAGCTTTGTTTTGGCTTTAAATTCTAATACTCCACAGCTTAATTCTGCCAAGGTTTGGGAGTTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAG
TTGGCTTTGCCTGCAGACAAAGGCGATGAGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAAAGGTATTGCAAT
ATGGCACCTCGGATCCAATCCTGACATGGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATAACGGCGAGGTGTGGGAGATGGAGTGGGACATGGGTG
GTATGACATTAGCATCAACAGGAAAGGACGGGATGGTTCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCT
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATGCTATGGCGAGCTTCGATAAAGGCACCCTCTGCTCAGCTTGGAACTACTCCGCCAGCAGATTAGCCACCGCCTCGGTCGACGGAACCCTCGTCATCTTCGA
TTCCCCCGATCCTTCTTCTTCATCCACGTCCCTCACTCGCACTTCAAACTTTAAGGCACATGAGGCTGCCATTTTAAAGATAGTTTGGGTTCCTCCAGAGTATGGTGATT
CAGTTGCATGCATTTGTTCAGATGGAACTTCATCATTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCTCTACAGTGGAAGCTATGCAAACGCTTTAAAAGTAATTCAGCC
CAAATGCTAGACATCCAATTTGGAAATTCGTCCTCTGGTCTGAAAATGATTGCTGCATTTTCAGATGGCCATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAA
GAATTGGCAACTCCAGGCTGAATTTCAGAATGTTATTGATTCCATTTCTACGGTTAGGAAAGCTTCTTGCTTATCTGCAAGTATATCTTGGAATCCACATCGAGGTGAAA
GACAACAATCGAGCTTTGTTTTGGCTTTAAATTCTAATACTCCACAGCTTAATTCTGCCAAGGTTTGGGAGTTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAG
TTGGCTTTGCCTGCAGACAAAGGCGATGAGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAAAGGTATTGCAAT
ATGGCACCTCGGATCCAATCCTGACATGGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATAACGGCGAGGTGTGGGAGATGGAGTGGGACATGGGTG
GTATGACATTAGCATCAACAGGAAAGGACGGGATGGTTCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCT
Protein sequenceShow/hide protein sequence
MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSA
QMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAE
LALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS