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MS012824 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012824
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold63:3741871..3742542
RNA-Seq ExpressionMS012824
SyntenyMS012824
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044909.1 hypothetical protein E6C27_scaffold74G002030 [Cucumis melo var. makuwa]3.5e-4353.25Show/hide
Query:  MAKLTATFLFFFFFAISFSRARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKIS---ATDSNSDPMVVIT
        MAKLT TF+ FF   IS S ARDL    +   ++      +AEDSDS  ASILLPS+K S+ E  KSI E DQVR +SNP++I+     D+ +DP+V+IT
Subjt:  MAKLTATFLFFFFFAISFSRARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKIS---ATDSNSDPMVVIT

Query:  FRPMNRQIGRRSVPLILRRGRRGCHQYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREMAIPSRWSEFLRAGP----RISDQKEDRKH
        FRP+NRQ GRRSVPL+ RRGRRGCH  +    KPW S++R+ G+SYGNDM+V EERSSP SG+N    RE+AIP + S F   GP     I D KED+K 
Subjt:  FRPMNRQIGRRSVPLILRRGRRGCHQYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREMAIPSRWSEFLRAGP----RISDQKEDRKH

Query:  LHHDRKEDVVEEKEEEQERKEKSGFLTNFRK
        LHH        E EE+ E KE SG L  FRK
Subjt:  LHHDRKEDVVEEKEEEQERKEKSGFLTNFRK

KAF3448691.1 hypothetical protein FNV43_RR09404 [Rhamnella rubrinervis]3.5e-1133.2Show/hide
Query:  MAKLTATF-LFFFFFAISFSRARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKISATD----------SN
        MAKL  T  +   FFA S        AR+  ++ V D  +  + +    +A++ LPSE+      TK    ++ VR  +   +   T+          S+
Subjt:  MAKLTATF-LFFFFFAISFSRARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKISATD----------SN

Query:  SDPMVVITFRPMNRQIGRRSVPLILRRGRRGCHQYQRHQFKPWNSMNRIGGVSYGNDMLVAEE-RSSPKSGANWESDREMAIPSRWSEFLRAGPRI----
        S P+ VI+FRP+NR   RR  PL  RRG    H +   QFKPW+   +   VSYGNDM+V++E R  P S     ++ +  IP+RWS F + GPR     
Subjt:  SDPMVVITFRPMNRQIGRRSVPLILRRGRRGCHQYQRHQFKPWNSMNRIGGVSYGNDMLVAEE-RSSPKSGANWESDREMAIPSRWSEFLRAGPRI----

Query:  SDQKEDRKHLHHDR------KEDVVEEKEEEQERKE-KSGFLTNFRK
         D+ E   H HH R      +    EE+E E E    + GF+   RK
Subjt:  SDQKEDRKHLHHDR------KEDVVEEKEEEQERKE-KSGFLTNFRK

KAG6600524.1 hypothetical protein SDJN03_05757, partial [Cucurbita argyrosperma subsp. sororia]2.3e-5560.34Show/hide
Query:  MAKLTATFLFFFFFAISFSRARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKIS---ATDSNSDPMVVIT
        MAK T TFL F  F +SFS AR LT RS+ EVSV   ASG+ +DSD   ASI LPSEK S+YEA KS++ L+QVR E NPS+I+   AT+S SDP+VV+T
Subjt:  MAKLTATFLFFFFFAISFSRARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKIS---ATDSNSDPMVVIT

Query:  FRPMNRQIGRRSVPLILRRGRRGCHQYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREMAIPSRWSEFLRAGPR---ISDQKEDRKHL
        FRP+NRQ  RR+VPLI RR RRGCH  +RH FKP++    +G +SYGNDM+VA+ER SP S ANW SDRE+AIPSRW E     PR    SD K+DRKHL
Subjt:  FRPMNRQIGRRSVPLILRRGRRGCHQYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREMAIPSRWSEFLRAGPR---ISDQKEDRKHL

Query:  H--HDRKEDVVEEKEEEQERKEKSGFLTNFRK
        H  H R E      E+EQE KEK+GFL NFRK
Subjt:  H--HDRKEDVVEEKEEEQERKEKSGFLTNFRK

KGN53397.1 hypothetical protein Csa_014640 [Cucumis sativus]2.9e-4253.68Show/hide
Query:  MAKLTATFLFFFFFAISFSRARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKISA---TDSNSDPMVVIT
        MAKLT TFL FF    S S ARDL        S+    S  A+DSD  S SILLP++K SD E+ +SI + DQVR ESNP++I+A    D+ SDP+V+IT
Subjt:  MAKLTATFLFFFFFAISFSRARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKISA---TDSNSDPMVVIT

Query:  FRPMNRQIGRRSVPLILRRGRRGCHQYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREMAIPSRWSEFLRAGP----RISDQKEDRKH
        FRP+NRQ GR SVPL+ RRGRRGCH  +    KPW S++R+  +SYGNDM+V EERS+P SG+N    RE+AIPS+ SEF    P      SD KED+KH
Subjt:  FRPMNRQIGRRSVPLILRRGRRGCHQYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREMAIPSRWSEFLRAGP----RISDQKEDRKH

Query:  LHHDRKEDVVEEKEEEQERKEKSGFLTNFRK
        LHH        E EEE E KEKS  L  FRK
Subjt:  LHHDRKEDVVEEKEEEQERKEKSGFLTNFRK

XP_018815558.2 uncharacterized protein LOC108987146 [Juglans regia]6.0e-1132.74Show/hide
Query:  MAKLTATF-LFFFFFAISFSR------ARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKISATDSNSDPM
        MAKL  TF + FF FA+ ++R        D+    + E ++    +  A D+++   +ILLPSEK     AT          +E   S +   +SNS P+
Subjt:  MAKLTATF-LFFFFFAISFSR------ARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKISATDSNSDPM

Query:  VVITFRPMNRQIGRRSVPLILRRGRRGCH--------QYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREM-AIPSRWSEFLRAGPRI
         +I+ RP++R   RR  PL+ R G R  H        Q++ H+FKPW        V YGNDM+VA+E+    SG+N ES   +  IP RW +F    PR 
Subjt:  VVITFRPMNRQIGRRSVPLILRRGRRGCH--------QYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREM-AIPSRWSEFLRAGPRI

Query:  SDQKEDRKHLHHDRKEDVVEEKE
                H   + +E+ + EK+
Subjt:  SDQKEDRKHLHHDRKEDVVEEKE

TrEMBL top hitse value%identityAlignment
A0A0A0KYD0 Uncharacterized protein1.4e-4253.68Show/hide
Query:  MAKLTATFLFFFFFAISFSRARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKISA---TDSNSDPMVVIT
        MAKLT TFL FF    S S ARDL        S+    S  A+DSD  S SILLP++K SD E+ +SI + DQVR ESNP++I+A    D+ SDP+V+IT
Subjt:  MAKLTATFLFFFFFAISFSRARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKISA---TDSNSDPMVVIT

Query:  FRPMNRQIGRRSVPLILRRGRRGCHQYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREMAIPSRWSEFLRAGP----RISDQKEDRKH
        FRP+NRQ GR SVPL+ RRGRRGCH  +    KPW S++R+  +SYGNDM+V EERS+P SG+N    RE+AIPS+ SEF    P      SD KED+KH
Subjt:  FRPMNRQIGRRSVPLILRRGRRGCHQYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREMAIPSRWSEFLRAGP----RISDQKEDRKH

Query:  LHHDRKEDVVEEKEEEQERKEKSGFLTNFRK
        LHH        E EEE E KEKS  L  FRK
Subjt:  LHHDRKEDVVEEKEEEQERKEKSGFLTNFRK

A0A2I4E837 uncharacterized protein LOC1089871462.9e-1132.74Show/hide
Query:  MAKLTATF-LFFFFFAISFSR------ARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKISATDSNSDPM
        MAKL  TF + FF FA+ ++R        D+    + E ++    +  A D+++   +ILLPSEK     AT          +E   S +   +SNS P+
Subjt:  MAKLTATF-LFFFFFAISFSR------ARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKISATDSNSDPM

Query:  VVITFRPMNRQIGRRSVPLILRRGRRGCH--------QYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREM-AIPSRWSEFLRAGPRI
         +I+ RP++R   RR  PL+ R G R  H        Q++ H+FKPW        V YGNDM+VA+E+    SG+N ES   +  IP RW +F    PR 
Subjt:  VVITFRPMNRQIGRRSVPLILRRGRRGCH--------QYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREM-AIPSRWSEFLRAGPRI

Query:  SDQKEDRKHLHHDRKEDVVEEKE
                H   + +E+ + EK+
Subjt:  SDQKEDRKHLHHDRKEDVVEEKE

A0A5D3CX93 Uncharacterized protein1.7e-4353.25Show/hide
Query:  MAKLTATFLFFFFFAISFSRARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKIS---ATDSNSDPMVVIT
        MAKLT TF+ FF   IS S ARDL    +   ++      +AEDSDS  ASILLPS+K S+ E  KSI E DQVR +SNP++I+     D+ +DP+V+IT
Subjt:  MAKLTATFLFFFFFAISFSRARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKIS---ATDSNSDPMVVIT

Query:  FRPMNRQIGRRSVPLILRRGRRGCHQYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREMAIPSRWSEFLRAGP----RISDQKEDRKH
        FRP+NRQ GRRSVPL+ RRGRRGCH  +    KPW S++R+ G+SYGNDM+V EERSSP SG+N    RE+AIP + S F   GP     I D KED+K 
Subjt:  FRPMNRQIGRRSVPLILRRGRRGCHQYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREMAIPSRWSEFLRAGP----RISDQKEDRKH

Query:  LHHDRKEDVVEEKEEEQERKEKSGFLTNFRK
        LHH        E EE+ E KE SG L  FRK
Subjt:  LHHDRKEDVVEEKEEEQERKEKSGFLTNFRK

A0A6J5XDJ6 Uncharacterized protein2.7e-0931.82Show/hide
Query:  MAKLTATFLFFFFFAISFSRARDLTARSKDEVSVHDFASGTAEDSDSNSA-SILLPSEK-----SSDYE-----ATKSIAELDQVRAESNPSKISATDSN
        MAKL   FL    F  SFS A   +   + E +  D A+    +S++  A +ILLPSEK     + D+E     A   + + D     +N      T S 
Subjt:  MAKLTATFLFFFFFAISFSRARDLTARSKDEVSVHDFASGTAEDSDSNSA-SILLPSEK-----SSDYE-----ATKSIAELDQVRAESNPSKISATDSN

Query:  SDPMVVITFRPMNRQIGRRSVPLILRRGRRGCHQYQRHQFKPWNSMNRIGG-----VSYGNDMLVAEE-------RSSPKSGANWESDREMAIPSRWSEF
        S P+ VI+FRP+NR   RR  PL  R G R C   +RH   PW+     G      V+YGNDM++ ++       R  P+            IP RW  F
Subjt:  SDPMVVITFRPMNRQIGRRSVPLILRRGRRGCHQYQRHQFKPWNSMNRIGG-----VSYGNDMLVAEE-------RSSPKSGANWESDREMAIPSRWSEF

Query:  LRAGPRI-----SDQKEDRKHLH--------HDRKE----DVVEEKEEEQERKEKSGFLTNFRK
           GPR       D + +R H H        HDR+E    + + E   E ER+ + G +  FRK
Subjt:  LRAGPRI-----SDQKEDRKHLH--------HDRKE----DVVEEKEEEQERKEKSGFLTNFRK

B9RCR4 Uncharacterized protein4.9e-1133.05Show/hide
Query:  FFFAISFSRARDLTARSKDEVSVHDFASGTAEDSD-SNSASILLPSEKSSDYEAT--------KSIAELDQVRAESNPSKISATDSNSDPMVVITFRPMN
        FFF  +F+ A DL   S    + +D    T  DSD   + +I+LPSEK     AT          I +L +  ++   ++ + TD  S P+ VITFRP+N
Subjt:  FFFAISFSRARDLTARSKDEVSVHDFASGTAEDSD-SNSASILLPSEKSSDYEAT--------KSIAELDQVRAESNPSKISATDSNSDPMVVITFRPMN

Query:  RQIGRRSV-PLILRRGRRGCHQYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREMAIPSRWSEFLRAGPRISDQKEDRK---------
        R I RRSV P    RG  G H +  +QFK  N+ ++ G  SYG+DM+++        G    SDR   +P+RW++F   G   S   E+ K         
Subjt:  RQIGRRSV-PLILRRGRRGCHQYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREMAIPSRWSEFLRAGPRISDQKEDRK---------

Query:  ----HLHHDRKEDVVEEKEEEQERKEKSGFLTNFRK
            H HH R E+   E ++ +    K GF+   RK
Subjt:  ----HLHHDRKEDVVEEKEEEQERKEKSGFLTNFRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGCTCACCGCTACGTTTCTTTTCTTCTTCTTCTTCGCAATTTCCTTCTCACGTGCTCGCGATCTCACAGCCCGATCGAAGGATGAAGTTTCCGTCCACGATTT
CGCCTCCGGTACGGCGGAGGATTCCGATTCGAATTCGGCGTCGATCCTCCTCCCGAGCGAGAAATCGTCCGATTACGAAGCAACAAAATCCATAGCAGAGCTCGATCAGG
TACGCGCCGAGTCCAATCCTTCTAAAATTTCGGCGACGGACAGCAATTCAGATCCGATGGTCGTGATCACGTTCCGTCCAATGAATCGCCAAATCGGGCGGCGATCGGTG
CCGCTGATCCTCCGCCGAGGCCGCCGCGGATGTCACCAGTACCAGCGCCACCAGTTCAAGCCGTGGAACTCAATGAATCGCATCGGCGGAGTCTCGTACGGCAACGACAT
GCTCGTAGCCGAGGAGCGATCGAGCCCTAAATCTGGCGCAAATTGGGAATCAGATCGCGAGATGGCGATTCCGTCGAGATGGAGCGAGTTCCTACGCGCTGGACCACGAA
TTAGCGATCAGAAGGAAGATCGGAAGCATCTCCACCATGATCGCAAAGAAGATGTAGTAGAAGAGAAGGAAGAAGAGCAAGAACGCAAAGAAAAGAGCGGTTTCCTGACG
AATTTCCGCAAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGCTCACCGCTACGTTTCTTTTCTTCTTCTTCTTCGCAATTTCCTTCTCACGTGCTCGCGATCTCACAGCCCGATCGAAGGATGAAGTTTCCGTCCACGATTT
CGCCTCCGGTACGGCGGAGGATTCCGATTCGAATTCGGCGTCGATCCTCCTCCCGAGCGAGAAATCGTCCGATTACGAAGCAACAAAATCCATAGCAGAGCTCGATCAGG
TACGCGCCGAGTCCAATCCTTCTAAAATTTCGGCGACGGACAGCAATTCAGATCCGATGGTCGTGATCACGTTCCGTCCAATGAATCGCCAAATCGGGCGGCGATCGGTG
CCGCTGATCCTCCGCCGAGGCCGCCGCGGATGTCACCAGTACCAGCGCCACCAGTTCAAGCCGTGGAACTCAATGAATCGCATCGGCGGAGTCTCGTACGGCAACGACAT
GCTCGTAGCCGAGGAGCGATCGAGCCCTAAATCTGGCGCAAATTGGGAATCAGATCGCGAGATGGCGATTCCGTCGAGATGGAGCGAGTTCCTACGCGCTGGACCACGAA
TTAGCGATCAGAAGGAAGATCGGAAGCATCTCCACCATGATCGCAAAGAAGATGTAGTAGAAGAGAAGGAAGAAGAGCAAGAACGCAAAGAAAAGAGCGGTTTCCTGACG
AATTTCCGCAAG
Protein sequenceShow/hide protein sequence
MAKLTATFLFFFFFAISFSRARDLTARSKDEVSVHDFASGTAEDSDSNSASILLPSEKSSDYEATKSIAELDQVRAESNPSKISATDSNSDPMVVITFRPMNRQIGRRSV
PLILRRGRRGCHQYQRHQFKPWNSMNRIGGVSYGNDMLVAEERSSPKSGANWESDREMAIPSRWSEFLRAGPRISDQKEDRKHLHHDRKEDVVEEKEEEQERKEKSGFLT
NFRK