; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012834 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012834
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNipped-B-like protein
Genome locationscaffold63:3846641..3847054
RNA-Seq ExpressionMS012834
SyntenyMS012834
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577140.1 hypothetical protein SDJN03_24714, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4378.99Show/hide
Query:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPPSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQE
        MI NLISSLN+KLQAVEISN  R RRTKKT+ VYR D+SKK QP  P Q + EI+KVKKRVRFA+TEPVIIAID EE+S  EEETEKK VRITVK+TKQE
Subjt:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPPSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQE

Query:  ANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAVVAN
        ANRMLSRCSDGGVLEFRDVA ELMRIPAARV+S++V N
Subjt:  ANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAVVAN

KAG7015140.1 hypothetical protein SDJN02_22773, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-4479.71Show/hide
Query:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPPSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQE
        MI NLISSLN+KLQAVEISN  R RRTKKT+ VYR D+SKK QP  PSQ + EI+KVKKRVRFA+TEPVIIAID EE+S  EEETEKK VRITVK+TKQE
Subjt:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPPSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQE

Query:  ANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAVVAN
        ANRMLSRCSDGGVLEFRDVA ELMRIPAARV+S++V N
Subjt:  ANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAVVAN

XP_022931429.1 uncharacterized protein LOC111437608 [Cucurbita moschata]2.4e-4279.26Show/hide
Query:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPPSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQE
        MI NLISSLN+KLQAVEISN  R RRTKKT+ VYR D+SKK QP  PSQ + EI+KVKKRVRFA+TEPVIIAID EE+S  EEETEKK VRITVK+TKQE
Subjt:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPPSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQE

Query:  ANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAV
        ANRMLSRCSDGGVLEF DVA ELMRIPAARV+S++
Subjt:  ANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAV

XP_022985430.1 uncharacterized protein LOC111483436 [Cucurbita maxima]2.4e-4279.56Show/hide
Query:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQP--PSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTK
        MI NLISSLN+KLQAVEISN  R RRTKKT+ VYR D+SKK QP  PSPSQ + EI+KVKKRVRFA+TEPVIIAID EE+S  EEETEKK VRITVK+TK
Subjt:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQP--PSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTK

Query:  QEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAV
        QEANRMLSRCSDGGVLEF DVA ELMRIPAARV+S++
Subjt:  QEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAV

XP_038906331.1 uncharacterized protein LOC120092170 [Benincasa hispida]5.1e-4578.57Show/hide
Query:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQ--PPSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTK
        MISN I SLN+KLQAVEISN  R RRTKKT+YVYRDDLSKK Q  PPS SQ + EIKKVKKRVRFA+TEPVIIAI  +E+ + EEETEKK VRITVK+TK
Subjt:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQ--PPSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTK

Query:  QEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAVVAN
        +EANRMLSRCSDGGVLEF DVACELMRIPA RV+S++VAN
Subjt:  QEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAVVAN

TrEMBL top hitse value%identityAlignment
A0A0A0KYE1 Uncharacterized protein2.0e-3972.22Show/hide
Query:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPP-----SPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAE-EEETEKKAVRITV
        MISNLISSLN+KLQAVEIS  SR +RTKKT+YVYRD+L+KKN  P     SP  +  EIKKVKKRVRFA+TEPVIIAI  + +  E E ETEKK VRITV
Subjt:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPP-----SPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAE-EEETEKKAVRITV

Query:  KMTKQEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAVVAN
        K+TKQEANRMLSRCS+GGVLEF DVA ELMRIP  RV S++VAN
Subjt:  KMTKQEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAVVAN

A0A1S3BS40 uncharacterized protein LOC1034930984.1e-4072.73Show/hide
Query:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPP-----SPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVK
        MISNLISSLN+KLQAVEISN  R +RTKKT+YVYRDDL+KK   P     SP  + AEIKKVKKRVRFA+TEPVIIAI  + +  EEEETEKK VRITVK
Subjt:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPP-----SPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVK

Query:  MTKQEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAVVAN
        +TKQEANRMLSRCS+ GVLEF DVA EL+RIP  RV+S++VAN
Subjt:  MTKQEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAVVAN

A0A5D3D246 Uncharacterized protein4.1e-4072.73Show/hide
Query:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPP-----SPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVK
        MISNLISSLN+KLQAVEISN  R +RTKKT+YVYRDDL+KK   P     SP  + AEIKKVKKRVRFA+TEPVIIAI  + +  EEEETEKK VRITVK
Subjt:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPP-----SPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVK

Query:  MTKQEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAVVAN
        +TKQEANRMLSRCS+ GVLEF DVA EL+RIP  RV+S++VAN
Subjt:  MTKQEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAVVAN

A0A6J1EU86 uncharacterized protein LOC1114376081.1e-4279.26Show/hide
Query:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPPSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQE
        MI NLISSLN+KLQAVEISN  R RRTKKT+ VYR D+SKK QP  PSQ + EI+KVKKRVRFA+TEPVIIAID EE+S  EEETEKK VRITVK+TKQE
Subjt:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPPSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQE

Query:  ANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAV
        ANRMLSRCSDGGVLEF DVA ELMRIPAARV+S++
Subjt:  ANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAV

A0A6J1JBA8 uncharacterized protein LOC1114834361.1e-4279.56Show/hide
Query:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQP--PSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTK
        MI NLISSLN+KLQAVEISN  R RRTKKT+ VYR D+SKK QP  PSPSQ + EI+KVKKRVRFA+TEPVIIAID EE+S  EEETEKK VRITVK+TK
Subjt:  MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQP--PSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTK

Query:  QEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAV
        QEANRMLSRCSDGGVLEF DVA ELMRIPAARV+S++
Subjt:  QEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G23880.1 unknown protein7.9e-0432.79Show/hide
Query:  EEQSAEEEETEKKAVRITVKMTKQEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAVV
        E++S +  E +++ VR+ +KMTK EA R+LS+C +  VL+   +  ++  +P  ++  A+V
Subjt:  EEQSAEEEETEKKAVRITVKMTKQEANRMLSRCSDGGVLEFRDVACELMRIPAARVTSAVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGCAACTTGATTTCAAGCCTGAACAGAAAGCTGCAGGCGGTCGAAATTAGCAATCCCAGTCGCAGAAGACGAACGAAGAAGACGAGTTACGTTTACAGAGACGA
TTTGAGCAAGAAGAATCAGCCGCCGTCGCCGTCTCAGCGGGAGGCGGAAATCAAGAAAGTGAAGAAGAGAGTGCGATTTGCAGAGACGGAGCCGGTGATAATCGCCATTG
ACGGAGAGGAACAGAGCGCGGAGGAGGAGGAAACAGAGAAGAAGGCAGTGAGAATTACGGTGAAAATGACGAAGCAAGAAGCGAACCGGATGCTGTCGAGGTGCTCCGAT
GGCGGCGTTCTCGAATTCAGAGATGTGGCTTGCGAGCTCATGCGGATTCCTGCTGCTCGAGTTACCTCTGCTGTGGTCGCCAAT
mRNA sequenceShow/hide mRNA sequence
ATGATCAGCAACTTGATTTCAAGCCTGAACAGAAAGCTGCAGGCGGTCGAAATTAGCAATCCCAGTCGCAGAAGACGAACGAAGAAGACGAGTTACGTTTACAGAGACGA
TTTGAGCAAGAAGAATCAGCCGCCGTCGCCGTCTCAGCGGGAGGCGGAAATCAAGAAAGTGAAGAAGAGAGTGCGATTTGCAGAGACGGAGCCGGTGATAATCGCCATTG
ACGGAGAGGAACAGAGCGCGGAGGAGGAGGAAACAGAGAAGAAGGCAGTGAGAATTACGGTGAAAATGACGAAGCAAGAAGCGAACCGGATGCTGTCGAGGTGCTCCGAT
GGCGGCGTTCTCGAATTCAGAGATGTGGCTTGCGAGCTCATGCGGATTCCTGCTGCTCGAGTTACCTCTGCTGTGGTCGCCAAT
Protein sequenceShow/hide protein sequence
MISNLISSLNRKLQAVEISNPSRRRRTKKTSYVYRDDLSKKNQPPSPSQREAEIKKVKKRVRFAETEPVIIAIDGEEQSAEEEETEKKAVRITVKMTKQEANRMLSRCSD
GGVLEFRDVACELMRIPAARVTSAVVAN