; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012844 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012844
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein SKIP8-like
Genome locationscaffold63:3914592..3917001
RNA-Seq ExpressionMS012844
SyntenyMS012844
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR032710 - NTF2-like domain superfamily
IPR036047 - F-box-like domain superfamily
IPR037401 - SnoaL-like domain
IPR044260 - F-box protein SKIP8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600509.1 F-box protein SKIP8, partial [Cucurbita argyrosperma subsp. sororia]8.9e-15486.29Show/hide
Query:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVH------IRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN
        MEIASAAT+AL SQPFPIAAIVTFLCFLLALF AV       IRR KALQS G        VG RNC+CTCSLNGGVVIGG DPRA +TSS  ++MPYLN
Subjt:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVH------IRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN

Query:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA
        GRVVEVLEK PVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVTP NGWKAYYAATRTIMN+NA
Subjt:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA

Query:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM
        QF NI+RERSLQAMSHFWLNADYVKCIH SGEFFSGYNAVIQSWQ+AFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYM
Subjt:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM

Query:  VHHHSSVMLIDGEVEQQMVHG
        VHHHSSVMLI GEVE+QM HG
Subjt:  VHHHSSVMLIDGEVEQQMVHG

KAG7031147.1 F-box protein SKIP8 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-15486.6Show/hide
Query:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVH------IRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN
        MEIASAAT+AL SQPFPIAAIVTFLCFLLALFAAV       IRR KALQS G        VG RNC+CTCSLNGGVVIGG DPRA +TSS  ++MPYLN
Subjt:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVH------IRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN

Query:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA
        GRVVEVLEK PVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVTP NGWKAYYAATRTIMN+NA
Subjt:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA

Query:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM
        QF NI+RERSLQAMSHFWLNADYVKCIH SGEFFSGYNAVIQSWQ+AFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYM
Subjt:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM

Query:  VHHHSSVMLIDGEVEQQMVHG
        VHHHSSVMLI GEVE+QM HG
Subjt:  VHHHSSVMLIDGEVEQQMVHG

XP_022136371.1 F-box protein SKIP8-like [Momordica charantia]5.4e-17599.05Show/hide
Query:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVHIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEV
        MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVHIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSA +SMPYLNGRVVEV
Subjt:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVHIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEV

Query:  LEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIV
        LEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIV
Subjt:  LEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIV

Query:  RERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSS
        RERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSS
Subjt:  RERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSS

Query:  VMLIDGEVEQQMVHG
        VMLIDGEVEQQMV G
Subjt:  VMLIDGEVEQQMVHG

XP_022942140.1 F-box protein SKIP8-like [Cucurbita moschata]5.2e-15486.29Show/hide
Query:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVH------IRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN
        MEIASA T+AL SQPFPIAAIVTFLCFLLALFAAV       IRR KALQS G        VG RNC+CTCSLNGGVVIGG DPRA +TSS  ++MPYLN
Subjt:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVH------IRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN

Query:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA
        GRVVEVLEK P+VVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVTP NGWKAYYAATRTIMN+NA
Subjt:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA

Query:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM
        QF NI+RERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQ+AFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYM
Subjt:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM

Query:  VHHHSSVMLIDGEVEQQMVHG
        VHHHSSVMLI GEVE+QM HG
Subjt:  VHHHSSVMLIDGEVEQQMVHG

XP_038880969.1 F-box protein SKIP8-like [Benincasa hispida]8.6e-15788.47Show/hide
Query:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAV------HIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN
        MEI S+ATIALSSQPFPIAAIVTFLCFLLALFAAV      +IRR KALQSV         +G RNC+CTCSLNGGVVIGG DPRA ITSS S+SMPYLN
Subjt:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAV------HIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN

Query:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA
        GR VEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTP NGWKAYYAATRTIMN+NA
Subjt:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA

Query:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM
        QF+NI+R+RSLQAMS FWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM
Subjt:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM

Query:  VHHHSSVMLIDGEVEQQMVHG
        VHHHSSVMLI GE+EQQMVHG
Subjt:  VHHHSSVMLIDGEVEQQMVHG

TrEMBL top hitse value%identityAlignment
A0A0A0KX34 F-box domain-containing protein5.6e-15486.29Show/hide
Query:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAV------HIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN
        MEI S+ATIALSSQPFPIAAIVTFLCFLLA+F AV      +IRR K LQS          VG RNC+CTCSLNGGVVI G DPRA ITSS S+SMPYLN
Subjt:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAV------HIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN

Query:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA
        GR VEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTP NGWK+YYAATRTIMN+NA
Subjt:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA

Query:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM
        QF+NI+R+RSLQAMS FWLNADYVKCIHASGEFFSGYNAV+QSWQ+AFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM
Subjt:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM

Query:  VHHHSSVMLIDGEVEQQMVHG
        VHHHSSVMLI GE+EQQMVHG
Subjt:  VHHHSSVMLIDGEVEQQMVHG

A0A5A7TU63 F-box protein SKIP81.3e-15386.29Show/hide
Query:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAV------HIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN
        MEI S+ATIALSSQPFPIAAIVTFLCFLLA+F AV      +IRR K+LQS          VG RNC+CTCSLNGGVVI G DPRA ITSS S+SMPYLN
Subjt:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAV------HIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN

Query:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA
        GR VEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTP NGWK+YYAATRTIMN+NA
Subjt:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA

Query:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM
        QF+NI+R+RSLQAMS FWLNADYVKCIHASGEFFSGYNAVIQSWQ+AFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTNIYEFH+GRWYM
Subjt:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM

Query:  VHHHSSVMLIDGEVEQQMVHG
        VHHHSSVMLI GE+EQQMVHG
Subjt:  VHHHSSVMLIDGEVEQQMVHG

A0A6J1C3C3 F-box protein SKIP8-like2.6e-17599.05Show/hide
Query:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVHIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEV
        MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVHIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSA +SMPYLNGRVVEV
Subjt:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVHIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEV

Query:  LEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIV
        LEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIV
Subjt:  LEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIV

Query:  RERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSS
        RERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSS
Subjt:  RERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSS

Query:  VMLIDGEVEQQMVHG
        VMLIDGEVEQQMV G
Subjt:  VMLIDGEVEQQMVHG

A0A6J1EUJ3 F-box protein SKIP8-like7.3e-15486.92Show/hide
Query:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAV------HIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN
        MEIASAATIAL SQPFPIAAIVTFLCFLLALFAAV      +IRR K +Q  G        VG RN +CTCSLNGGV IGG +PRA ITSS S+SMPYLN
Subjt:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAV------HIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN

Query:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA
        GR VEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQDTVTP NGWKAYYAATRTIMN+NA
Subjt:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA

Query:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM
        QF+NI+R+RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQ+AFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM
Subjt:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM

Query:  VHHHSSVMLIDGEVEQQMVHG
        VHHHSSVMLI GE+EQQMVHG
Subjt:  VHHHSSVMLIDGEVEQQMVHG

A0A6J1FVP4 F-box protein SKIP8-like2.5e-15486.29Show/hide
Query:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVH------IRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN
        MEIASA T+AL SQPFPIAAIVTFLCFLLALFAAV       IRR KALQS G        VG RNC+CTCSLNGGVVIGG DPRA +TSS  ++MPYLN
Subjt:  MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVH------IRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLN

Query:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA
        GRVVEVLEK P+VVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVTP NGWKAYYAATRTIMN+NA
Subjt:  GRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNA

Query:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM
        QF NI+RERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQ+AFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYM
Subjt:  QFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM

Query:  VHHHSSVMLIDGEVEQQMVHG
        VHHHSSVMLI GEVE+QM HG
Subjt:  VHHHSSVMLIDGEVEQQMVHG

SwissProt top hitse value%identityAlignment
Q93YV9 F-box protein SKIP87.7e-9265.59Show/hide
Query:  NGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
        NGG    G   R ++T+S                      V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
Subjt:  NGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT

Query:  LEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVS
        LEQD +TP NGWK YYA TR I++VN +FF I+R+R+LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQL FNWEQG +FQV   R R+L+DMAWV+
Subjt:  LEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVS

Query:  MKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIDGEVEQQMVH
        MK Y+++D GPF +TN++EFHNGRW+MVHHHSSVMLID   +Q +VH
Subjt:  MKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIDGEVEQQMVH

Q9T0B0 Probable F-box protein At4g239605.1e-3559.13Show/hide
Query:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNAD
        M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++FT E +  TP NGWKA++A T+ +M VN +FF+I+  RSL  M+  WLN+D
Subjt:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNAD

Query:  YVKCIHASGEFFSGY
        YVKC + SGE F+GY
Subjt:  YVKCIHASGEFFSGY

Arabidopsis top hitse value%identityAlignment
AT4G10925.1 Nuclear transport factor 2 (NTF2) family protein5.5e-9365.59Show/hide
Query:  NGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
        NGG    G   R ++T+S                      V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
Subjt:  NGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT

Query:  LEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVS
        LEQD +TP NGWK YYA TR I++VN +FF I+R+R+LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQL FNWEQG +FQV   R R+L+DMAWV+
Subjt:  LEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVS

Query:  MKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIDGEVEQQMVH
        MK Y+++D GPF +TN++EFHNGRW+MVHHHSSVMLID   +Q +VH
Subjt:  MKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIDGEVEQQMVH

AT4G10925.2 Nuclear transport factor 2 (NTF2) family protein5.5e-9365.59Show/hide
Query:  NGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
        NGG    G   R ++T+S                      V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
Subjt:  NGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT

Query:  LEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVS
        LEQD +TP NGWK YYA TR I++VN +FF I+R+R+LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQL FNWEQG +FQV   R R+L+DMAWV+
Subjt:  LEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVS

Query:  MKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIDGEVEQQMVH
        MK Y+++D GPF +TN++EFHNGRW+MVHHHSSVMLID   +Q +VH
Subjt:  MKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIDGEVEQQMVH

AT4G10925.3 Nuclear transport factor 2 (NTF2) family protein5.5e-9365.59Show/hide
Query:  NGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
        NGG    G   R ++T+S                      V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
Subjt:  NGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT

Query:  LEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVS
        LEQD +TP NGWK YYA TR I++VN +FF I+R+R+LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQL FNWEQG +FQV   R R+L+DMAWV+
Subjt:  LEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVS

Query:  MKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIDGEVEQQMVH
        MK Y+++D GPF +TN++EFHNGRW+MVHHHSSVMLID   +Q +VH
Subjt:  MKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIDGEVEQQMVH

AT4G23960.1 F-box family protein3.6e-3659.13Show/hide
Query:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNAD
        M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++FT E +  TP NGWKA++A T+ +M VN +FF+I+  RSL  M+  WLN+D
Subjt:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNAD

Query:  YVKCIHASGEFFSGY
        YVKC + SGE F+GY
Subjt:  YVKCIHASGEFFSGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGCCTCTGCTGCCACCATTGCCTTGTCGTCACAACCCTTTCCCATAGCTGCGATTGTTACGTTTCTTTGTTTTCTTCTCGCTCTTTTCGCCGCCGTTCACAT
TAGGAGGGCGAAAGCGCTGCAATCGGTGGGCGAGGGCGGTCTTTCTGACTCATTGGTGGGTGCAAGGAATTGTGATTGTACCTGTTCGCTTAACGGTGGTGTGGTTATTG
GGGGTTCCGACCCCAGGGCTTCGATTACTTCTTCAGCCAGTTCGAGTATGCCTTATTTGAACGGCCGTGTAGTGGAAGTGTTGGAGAAGGCACCGGTGGTCGTGACGGAG
CGGCAGACGGGCGCTTCGATGATGGAGCAGTTGGTTCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGTCTGTGCCGTTTGTCCATGACTAATTCGTT
GATGCGCAAGGCAGCGAATGATGATAATGCCTGGAAGGCGCTTTATCATAAGGACTTCACACTGGAACAGGATACTGTAACTCCAACAAACGGGTGGAAGGCTTATTATG
CTGCAACAAGAACAATTATGAATGTCAATGCCCAATTCTTTAACATCGTCAGAGAGAGGTCTCTTCAAGCGATGAGTCATTTTTGGTTGAATGCAGATTACGTGAAGTGT
ATTCATGCCTCAGGAGAATTCTTTTCTGGGTATAATGCAGTAATTCAGAGCTGGCAGCTTGCGTTTAATTGGGAACAAGGGATTAATTTTCAGGTGCGTGATGCACGGGC
TCGTGTCCTTTCAGACATGGCCTGGGTTAGCATGAAAACCTATGTCGACATGGATACAGGACCATTCAATGTGACTAACATCTACGAGTTCCATAACGGTCGATGGTACA
TGGTTCATCATCACAGCTCTGTGATGCTTATTGATGGAGAGGTGGAACAACAAATGGTGCATGGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTGCCTCTGCTGCCACCATTGCCTTGTCGTCACAACCCTTTCCCATAGCTGCGATTGTTACGTTTCTTTGTTTTCTTCTCGCTCTTTTCGCCGCCGTTCACAT
TAGGAGGGCGAAAGCGCTGCAATCGGTGGGCGAGGGCGGTCTTTCTGACTCATTGGTGGGTGCAAGGAATTGTGATTGTACCTGTTCGCTTAACGGTGGTGTGGTTATTG
GGGGTTCCGACCCCAGGGCTTCGATTACTTCTTCAGCCAGTTCGAGTATGCCTTATTTGAACGGCCGTGTAGTGGAAGTGTTGGAGAAGGCACCGGTGGTCGTGACGGAG
CGGCAGACGGGCGCTTCGATGATGGAGCAGTTGGTTCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGTCTGTGCCGTTTGTCCATGACTAATTCGTT
GATGCGCAAGGCAGCGAATGATGATAATGCCTGGAAGGCGCTTTATCATAAGGACTTCACACTGGAACAGGATACTGTAACTCCAACAAACGGGTGGAAGGCTTATTATG
CTGCAACAAGAACAATTATGAATGTCAATGCCCAATTCTTTAACATCGTCAGAGAGAGGTCTCTTCAAGCGATGAGTCATTTTTGGTTGAATGCAGATTACGTGAAGTGT
ATTCATGCCTCAGGAGAATTCTTTTCTGGGTATAATGCAGTAATTCAGAGCTGGCAGCTTGCGTTTAATTGGGAACAAGGGATTAATTTTCAGGTGCGTGATGCACGGGC
TCGTGTCCTTTCAGACATGGCCTGGGTTAGCATGAAAACCTATGTCGACATGGATACAGGACCATTCAATGTGACTAACATCTACGAGTTCCATAACGGTCGATGGTACA
TGGTTCATCATCACAGCTCTGTGATGCTTATTGATGGAGAGGTGGAACAACAAATGGTGCATGGA
Protein sequenceShow/hide protein sequence
MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVHIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTE
RQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKC
IHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIDGEVEQQMVHG