; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012845 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012845
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLin-54-like
Genome locationscaffold63:3918003..3919473
RNA-Seq ExpressionMS012845
SyntenyMS012845
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031146.1 hypothetical protein SDJN02_05185 [Cucurbita argyrosperma subsp. argyrosperma]5.8e-6783.53Show/hide
Query:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFL-SSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGC
        MG+ALLSVPAP+  PFFH SY TTPR ++G  TSL FSSSR +SFL SSSSSSSS+SVVDEETNSSPPD+LSLQSESDPD SSF RGCKACGKEEIERGC
Subjt:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFL-SSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGC

Query:  NGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLRYKP
        NGEGRIQGGIATVPGFGWWPIKAYRPCP FVASGGRYKRRGQSMDEV SGG RT+ASA    K+SLRYKP
Subjt:  NGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLRYKP

XP_022136433.1 uncharacterized protein LOC111008142 [Momordica charantia]7.0e-8195.83Show/hide
Query:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN
        MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDE+TNSSPPDELSLQSESDPDDSSF RGCKACGKEEIERGCN
Subjt:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN

Query:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLRYK
         EGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDAS GAR KNSL  K
Subjt:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLRYK

XP_022942141.1 uncharacterized protein LOC111447296 [Cucurbita moschata]3.2e-6583.83Show/hide
Query:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFL-SSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGC
        MG+ALLSVPAP+  PFFH SY TTPR ++G  TSL FSSSR +SFL SSSSSSSS+SVVDEETNSSPPD+LSLQSESDPD SSF RGCKACGKEEIERGC
Subjt:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFL-SSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGC

Query:  NGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLR
        NGEGRIQGGIATVPGFGWWPIKAYRPCP FVASGGRYKRRGQSMDEV SGG RT+ASA A  K+SLR
Subjt:  NGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLR

XP_022982784.1 uncharacterized protein LOC111481538 isoform X1 [Cucurbita maxima]5.4e-6582.53Show/hide
Query:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN
        MGTALLSVPAP+  PFFH SY T+PRW++G  TSL FSSSR +SFL  SSSSSSASVVDEETNSSPPD+LSLQSESDPD SSF RGCKACG+EEIERGCN
Subjt:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN

Query:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLR
        G+GRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEV SGG R +ASA A  K+S R
Subjt:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLR

XP_022982791.1 uncharacterized protein LOC111481538 isoform X2 [Cucurbita maxima]1.2e-6482.93Show/hide
Query:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN
        MGTALLSVPAP+  PFFH SY T+PRW++G  TSL FSSSR +SFL  SSSSSSASVVDEETNSSPPD+LSLQSESDPD SSF RGCKACG+EEIERGCN
Subjt:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN

Query:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNS
        G+GRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEV SGG R +ASA A  K+S
Subjt:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNS

TrEMBL top hitse value%identityAlignment
A0A5D3D003 Uncharacterized protein1.6e-5979.29Show/hide
Query:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN
        MGTALLSVPA    PFFH S+ +        TTSL FSSSR  +FLSSSSSSSSASVVDEE NSS PD+LSLQSESDPDDSSF  GCKACGKEEIERGCN
Subjt:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN

Query:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLRYKP
        GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKR GQSMDEV SGGGRT+ASA    K+S RY P
Subjt:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLRYKP

A0A6J1C7J9 uncharacterized protein LOC1110081423.4e-8195.83Show/hide
Query:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN
        MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDE+TNSSPPDELSLQSESDPDDSSF RGCKACGKEEIERGCN
Subjt:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN

Query:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLRYK
         EGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDAS GAR KNSL  K
Subjt:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLRYK

A0A6J1FN06 uncharacterized protein LOC1114472961.5e-6583.83Show/hide
Query:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFL-SSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGC
        MG+ALLSVPAP+  PFFH SY TTPR ++G  TSL FSSSR +SFL SSSSSSSS+SVVDEETNSSPPD+LSLQSESDPD SSF RGCKACGKEEIERGC
Subjt:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFL-SSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGC

Query:  NGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLR
        NGEGRIQGGIATVPGFGWWPIKAYRPCP FVASGGRYKRRGQSMDEV SGG RT+ASA A  K+SLR
Subjt:  NGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLR

A0A6J1J0C4 uncharacterized protein LOC111481538 isoform X25.8e-6582.93Show/hide
Query:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN
        MGTALLSVPAP+  PFFH SY T+PRW++G  TSL FSSSR +SFL  SSSSSSASVVDEETNSSPPD+LSLQSESDPD SSF RGCKACG+EEIERGCN
Subjt:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN

Query:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNS
        G+GRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEV SGG R +ASA A  K+S
Subjt:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNS

A0A6J1J5I4 uncharacterized protein LOC111481538 isoform X12.6e-6582.53Show/hide
Query:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN
        MGTALLSVPAP+  PFFH SY T+PRW++G  TSL FSSSR +SFL  SSSSSSASVVDEETNSSPPD+LSLQSESDPD SSF RGCKACG+EEIERGCN
Subjt:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN

Query:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLR
        G+GRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEV SGG R +ASA A  K+S R
Subjt:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G42070.1 unknown protein6.0e-3050.3Show/hide
Query:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN
        M  ++ S+  PR   F + S+ + P W   S+  L  SS      L S SSS S SVV+ + +             D +D +FS GC+ACGKEE E GCN
Subjt:  MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCN

Query:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSL
        G+GRIQGGIATVPGFGWWPIKAYRPCP FV +GGRY+R GQSMDEVA G G + +S      +SL
Subjt:  GEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACTGCGCTTCTCTCAGTTCCTGCCCCTCGCCCAACTCCATTCTTCCATTGCTCATATGGTACCACTCCCAGATGGACCTATGGATCCACAACTTCACTTGGGTT
TTCATCATCTAGACGCATCAGCTTCCTCTCTTCGTCTTCATCTTCTTCTTCAGCTTCTGTTGTAGACGAAGAAACAAATTCTTCTCCCCCAGATGAACTCTCTCTTCAGT
CTGAATCTGACCCAGATGATTCTTCCTTCAGCAGAGGGTGTAAGGCCTGTGGAAAGGAGGAGATTGAGAGGGGATGCAATGGGGAGGGAAGGATACAAGGTGGCATTGCA
ACAGTTCCAGGCTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGGATTTGTAGCATCTGGTGGCAGATATAAGAGGCGTGGACAAAGCATGGACGAGGTTGC
GTCTGGAGGAGGGAGGACAGACGCCTCAGCGGGTGCTAGAATAAAGAACTCGTTGAGGTACAAGCCA
mRNA sequenceShow/hide mRNA sequence
ATGGGAACTGCGCTTCTCTCAGTTCCTGCCCCTCGCCCAACTCCATTCTTCCATTGCTCATATGGTACCACTCCCAGATGGACCTATGGATCCACAACTTCACTTGGGTT
TTCATCATCTAGACGCATCAGCTTCCTCTCTTCGTCTTCATCTTCTTCTTCAGCTTCTGTTGTAGACGAAGAAACAAATTCTTCTCCCCCAGATGAACTCTCTCTTCAGT
CTGAATCTGACCCAGATGATTCTTCCTTCAGCAGAGGGTGTAAGGCCTGTGGAAAGGAGGAGATTGAGAGGGGATGCAATGGGGAGGGAAGGATACAAGGTGGCATTGCA
ACAGTTCCAGGCTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGGATTTGTAGCATCTGGTGGCAGATATAAGAGGCGTGGACAAAGCATGGACGAGGTTGC
GTCTGGAGGAGGGAGGACAGACGCCTCAGCGGGTGCTAGAATAAAGAACTCGTTGAGGTACAAGCCA
Protein sequenceShow/hide protein sequence
MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSASVVDEETNSSPPDELSLQSESDPDDSSFSRGCKACGKEEIERGCNGEGRIQGGIA
TVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASAGARIKNSLRYKP