CuGenDBv2

Gene ID	MS012849
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Auxin response factor
Genome location	scaffold63:3960899..3961642
RNA-Seq Expression	MS012849
Synteny	MS012849
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0009734 - auxin-activated signaling pathway (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR003340 - B3 DNA binding domain IPR015300 - DNA-binding pseudobarrel domain superfamily IPR044835 - Auxin response factor

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0044935.1 auxin response factor 18-like [Cucumis melo var. makuwa]

3.4e-76

100

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

XP_008451925.1 PREDICTED: auxin response factor 18-like [Cucumis melo]

3.4e-76

100

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

XP_011653224.1 auxin response factor 9 [Cucumis sativus]

3.4e-76

100

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

XP_022136600.1 auxin response factor 9 [Momordica charantia]

3.4e-76

100

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

XP_038906161.1 auxin response factor 9 [Benincasa hispida]

3.4e-76

100

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KX41 Auxin response factor

1.6e-76

100

Show/hide

Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

A0A1S3BSL3 Auxin response factor

1.6e-76

100

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

A0A5A7TU73 Auxin response factor

1.6e-76

100

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

A0A5D3D1H4 Auxin response factor

1.6e-76

100

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

A0A6J1C4D7 Auxin response factor

1.6e-76

100

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

SwissProt top hits

e value

%identity

Alignment

A2ZET6 Auxin response factor 23

3.3e-66

82.64

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        FCK LTASDTSTHGGFSVLR+HA ECLPPLDM++Q PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD+F+FLRGENGELRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        R  RQQ+++PSSVISSHSMHLGVLATA HAV+T T F VYYKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

Q6YVY0 Auxin response factor 7

1.1e-66

84.03

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        FCK LTASDTSTHGGFSVLR+HA ECLPPLDMTQ  P QELVA+DLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLVAGD+F+FLRGENGELRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RL RQ ++MPSSVISSHSMHLGVLATASHA+ST T F V+YKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

Q9C5W9 Auxin response factor 18

7.1e-69

87.5

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        F K+LTASDTSTHGGFSVLRKHATECLP LDMTQ TPTQELV +DLHG+EWRFKHIFRGQPRRHLLTTGWSTFV+SKRLVAGD+FVFLRGENG+LRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RLAR QS+MP+SVISS SMHLGVLATASHAV T T FVV+YKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

Q9XED8 Auxin response factor 9

3.4e-71

89.58

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        F KVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVA+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGELRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        R   QQSSMPSSVISSHSMHLGVLATA HA  T+T F+VYYKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

Q9ZPY6 Auxin response factor 11

4.2e-69

88.19

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        F K+LTASDTSTHGGFSVLRKHATECLP LDMTQ TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGE G+LRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RLA+QQS+MP+SVISS SM LGVLATASHAV+T T FVV+YKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

Arabidopsis top hits

e value

%identity

Alignment

AT2G46530.1 auxin response factor 11

3.0e-70

88.19

Show/hide

Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        F K+LTASDTSTHGGFSVLRKHATECLP LDMTQ TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGE G+LRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RLA+QQS+MP+SVISS SM LGVLATASHAV+T T FVV+YKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

AT2G46530.2 auxin response factor 11

3.0e-70

88.19

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        F K+LTASDTSTHGGFSVLRKHATECLP LDMTQ TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGE G+LRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RLA+QQS+MP+SVISS SM LGVLATASHAV+T T FVV+YKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

AT2G46530.3 auxin response factor 11

3.0e-70

88.19

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        F K+LTASDTSTHGGFSVLRKHATECLP LDMTQ TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGE G+LRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        RLA+QQS+MP+SVISS SM LGVLATASHAV+T T FVV+YKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

AT4G23980.1 auxin response factor 9

2.4e-72

89.58

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Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        F KVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVA+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGELRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        R   QQSSMPSSVISSHSMHLGVLATA HA  T+T F+VYYKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

AT4G23980.2 auxin response factor 9

2.4e-72

89.58

Show/hide

Query:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR
        F KVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVA+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGELRVGVR
Subjt:  FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVR

Query:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR
        R   QQSSMPSSVISSHSMHLGVLATA HA  T+T F+VYYKPR
Subjt:  RLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

TTTTGCAAGGTTTTAACTGCTTCTGATACCAGCACCCATGGCGGGTTCTCTGTGCTTCGTAAACATGCAACAGAATGCTTGCCTCCATTGGATATGACCCAACAGACCCC
GACTCAGGAACTCGTCGCGAAAGATCTTCACGGTTACGAGTGGCGATTCAAGCATATTTTTAGGGGTCAGCCTCGAAGGCATTTGCTAACGACCGGATGGAGCACCTTTG
TTACTTCTAAGAGATTAGTTGCTGGAGATTCTTTTGTATTCTTGAGGGGGGAAAACGGGGAGTTGCGAGTTGGAGTGAGACGTCTTGCTCGCCAACAAAGCAGCATGCCT
TCGTCGGTGATCTCGAGTCACAGCATGCACCTAGGAGTGCTTGCTACTGCATCTCATGCCGTGTCAACTCAAACTCGCTTTGTTGTCTATTATAAGCCCAGG

mRNA sequence

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Protein sequence

Show/hide protein sequence

FCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMP
SSVISSHSMHLGVLATASHAVSTQTRFVVYYKPR

MS012849 (gene) of Bitter gourd (TR) v1 genome