CuGenDBv2

Gene ID	MS012860
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	C2H2-type domain-containing protein
Genome location	scaffold63:4056915..4058229
RNA-Seq Expression	MS012860
Synteny	MS012860
Gene Ontology terms	NA
InterPro domains	IPR007513 - Uncharacterised protein family SERF, N-terminal IPR013087 - Zinc finger C2H2-type IPR026939 - ZNF706/At2g23090 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

EEF42492.1 conserved hypothetical protein [Ricinus communis]

1.5e-26

94.03

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAES
        MTRGKQKIEAQ+RNAE+NQKPKGSQLEARAVALKVICPICK QLANHNQLGDHYASKHPKEKPP+ES
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAES

KAG6577120.1 putative aspartic protease, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-26

94.12

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAESG
        MTRGKQKIEAQ+RNAEKNQK KGSQ EARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPP+ESG
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAESG

KAG6600413.1 hypothetical protein SDJN03_05646, partial [Cucurbita argyrosperma subsp. sororia]

3.1e-27

97.01

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAES
        MTRGKQKIEAQKRNAEKNQKPKGSQ EARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPP+ES
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAES

KAG7015122.1 hypothetical protein SDJN02_22755 [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-26

94.12

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAESG
        MTRGKQKIEAQ+RNAEKNQK KGSQ EARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPP+ESG
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAESG

TYK16504.1 zinc finger protein 706-like protein [Cucumis melo var. makuwa]

5.2e-27

95.59

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAESG
        MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLAN NQLGDHY SKHPKEKPP+ESG
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAESG

TrEMBL top hits

e value

%identity

Alignment

A0A2I0IJ83 C2H2-type domain-containing protein

1.1e-25

91.18

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAESG
        MTRGKQKIEAQKRNAE+NQKPK SQLEARAV LKVICPICKVQLANHNQL DHY SKHPKEKPP+ESG
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAESG

A0A4V6T4H8 C2H2-type domain-containing protein

1.1e-25

89.71

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAESG
        MTRGKQKIEAQ+RNAE+NQKPKGSQLEARAV LK+ CPICKVQLANHNQL DHYASKHPKEKPP+ESG
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAESG

A0A5D3CZW8 Zinc finger protein 706-like protein

2.5e-27

95.59

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAESG
        MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLAN NQLGDHY SKHPKEKPP+ESG
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAESG

B9S1M3 C2H2-type domain-containing protein

7.4e-27

94.03

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAES
        MTRGKQKIEAQ+RNAE+NQKPKGSQLEARAVALKVICPICK QLANHNQLGDHYASKHPKEKPP+ES
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAES

M0S062 C2H2-type domain-containing protein

1.1e-25

89.71

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAESG
        MTRGKQKIEAQ+RNAE+NQKPKGSQLEARAV LK+ CPICKVQLANHNQL DHYASKHPKEKPP+ESG
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAESG

SwissProt top hits

e value

%identity

Alignment

Q5ZMM5 Zinc finger protein 706

2.9e-04

37.14

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Query:  MTRGKQKIEAQKRNAEKNQKPK----GSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAE
        M RG+QKI++Q++NA+K  + K      Q  A   AL   C +C+ Q+ +      H+ SKHPK   P E
Subjt:  MTRGKQKIEAQKRNAEKNQKPK----GSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAE

Q9D115 Zinc finger protein 706

2.9e-04

38.57

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Query:  MTRGKQKIEAQKRNAEK---NQKPKGSQLEARA-VALKVICPICKVQLANHNQLGDHYASKHPKEKPPAE
        M RG+QKI++Q++NA+K    +K +G   +A A  AL   C +C+ Q+ +      H+ SKHPK   P E
Subjt:  MTRGKQKIEAQKRNAEK---NQKPKGSQLEARA-VALKVICPICKVQLANHNQLGDHYASKHPKEKPPAE

Q9Y5V0 Zinc finger protein 706

2.9e-04

38.57

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Query:  MTRGKQKIEAQKRNAEK---NQKPKGSQLEARA-VALKVICPICKVQLANHNQLGDHYASKHPKEKPPAE
        M RG+QKI++Q++NA+K    +K +G   +A A  AL   C +C+ Q+ +      H+ SKHPK   P E
Subjt:  MTRGKQKIEAQKRNAEK---NQKPKGSQLEARA-VALKVICPICKVQLANHNQLGDHYASKHPKEKPPAE

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGACCCGAGGAAAACAGAAGATCGAAGCTCAAAAACGAAATGCGGAGAAGAATCAGAAGCCCAAAGGCTCACAACTCGAGGCCAGAGCGGTTGCCCTTAAAGTCATCTG
CCCTATTTGCAAGGTACAACTAGCAAATCATAACCAATTGGGTGATCACTATGCCTCCAAACATCCAAAGGAAAAGCCTCCAGCAGAATCTGGC

mRNA sequence

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Protein sequence

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MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANHNQLGDHYASKHPKEKPPAESG

MS012860 (gene) of Bitter gourd (TR) v1 genome