; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012868 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012868
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLate embryogenesis abundant protein
Genome locationscaffold63:4125540..4125791
RNA-Seq ExpressionMS012868
SyntenyMS012868
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044980.1 uncharacterized protein E6C27_scaffold74G002880 [Cucumis melo var. makuwa]3.5e-3386.75Show/hide
Query:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
        RPIGRKGFHRKSSSPDMMRERVETESKE+KSN+SHV GEATPW+LD RTGIYYPKGHEKVL+ IPDGGGA VN QVN F+DEN
Subjt:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
TYK16491.1 uncharacterized protein E5676_scaffold21G002970 [Cucumis melo var. makuwa]3.5e-3386.75Show/hide
Query:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
        RPIGRKGFHRKSSSPDMMRERVETESKE+KSN+SHV GEATPW+LD RTGIYYPKGHEKVL+ IPDGGGA VN QVN F+DEN
Subjt:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
XP_004148978.1 uncharacterized protein LOC101205531 [Cucumis sativus]4.6e-3386.75Show/hide
Query:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
        +PIGRKGFHRKSSSPDMMRERVETESKE+KSN+SHV GE TPW+LD RTGIYYPKGHEKVL SIPDGGGAAVN QVN F+DEN
Subjt:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
XP_022136654.1 uncharacterized protein LOC111008306 [Momordica charantia]1.1e-3998.81Show/hide
Query:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDENS
        +PIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDENS
Subjt:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDENS
XP_038884831.1 uncharacterized protein LOC120075477 [Benincasa hispida]4.2e-3489.16Show/hide
Query:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
        +PIGRKGFHRKSSSPDM+RERVETESKE+KSNKSHV GEATPW+LD RTGIYYPKGHEKVLESIPDGGGAAVN QVN F+DEN
Subjt:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
TrEMBL top hitse value%identityAlignment
A0A0A0KX78 Uncharacterized protein2.2e-3386.75Show/hide
Query:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
        +PIGRKGFHRKSSSPDMMRERVETESKE+KSN+SHV GE TPW+LD RTGIYYPKGHEKVL SIPDGGGAAVN QVN F+DEN
Subjt:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
A0A1S3BTQ2 uncharacterized protein LOC1034930563.8e-3385.54Show/hide
Query:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
        +PIGRKGFHRKSSSPDMMRERVETESKE+KSN+SHV GEATPW+LD RTGIYYPKGHEKVL+ IPDGGGA VN QVN F+DEN
Subjt:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
A0A5A7TP55 Uncharacterized protein1.7e-3386.75Show/hide
Query:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
        RPIGRKGFHRKSSSPDMMRERVETESKE+KSN+SHV GEATPW+LD RTGIYYPKGHEKVL+ IPDGGGA VN QVN F+DEN
Subjt:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
A0A5D3CX31 Uncharacterized protein1.7e-3386.75Show/hide
Query:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
        RPIGRKGFHRKSSSPDMMRERVETESKE+KSN+SHV GEATPW+LD RTGIYYPKGHEKVL+ IPDGGGA VN QVN F+DEN
Subjt:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDEN
A0A6J1C4X8 uncharacterized protein LOC1110083065.5e-4098.81Show/hide
Query:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDENS
        +PIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDENS
Subjt:  RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDENS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73120.1 unknown protein2.5e-0839.19Show/hide
Query:  RPIGRKGFHRKSSSPDMMRERVETE----SKEVKSNK-----SHVTGEATPWMLDVRTGIYYPKGHEKVLESIP
        +P+ RK  H+KS+S D++R+ V+TE     +EVK+ +        +  A+ W+    TGIYYPKG EKV++ +P
Subjt:  RPIGRKGFHRKSSSPDMMRERVETE----SKEVKSNK-----SHVTGEATPWMLDVRTGIYYPKGHEKVLESIP
AT3G19550.1 unknown protein8.2e-0428.36Show/hide
Query:  GRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGA
        GR G   K++  + M   +    +++  +    +GE   W+   RTGI++P G E V+E +P+G  +
Subjt:  GRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGACCGATCGGGCGAAAGGGTTTCCACAGGAAAAGCTCTTCACCAGATATGATGAGGGAGAGAGTGGAAACAGAAAGCAAGGAAGTGAAGAGCAATAAGAGCCATGTGAC
GGGTGAGGCAACTCCATGGATGCTTGATGTTCGAACTGGAATTTATTACCCTAAAGGCCACGAGAAGGTCCTCGAAAGCATTCCTGATGGTGGTGGGGCTGCAGTAAACA
TGCAAGTCAATAGGTTTGACGATGAAAACAGT
mRNA sequenceShow/hide mRNA sequence
AGACCGATCGGGCGAAAGGGTTTCCACAGGAAAAGCTCTTCACCAGATATGATGAGGGAGAGAGTGGAAACAGAAAGCAAGGAAGTGAAGAGCAATAAGAGCCATGTGAC
GGGTGAGGCAACTCCATGGATGCTTGATGTTCGAACTGGAATTTATTACCCTAAAGGCCACGAGAAGGTCCTCGAAAGCATTCCTGATGGTGGTGGGGCTGCAGTAAACA
TGCAAGTCAATAGGTTTGACGATGAAAACAGT
Protein sequenceShow/hide protein sequence
RPIGRKGFHRKSSSPDMMRERVETESKEVKSNKSHVTGEATPWMLDVRTGIYYPKGHEKVLESIPDGGGAAVNMQVNRFDDENS