; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012872 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012872
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPatatin
Genome locationscaffold63:4139108..4139221
RNA-Seq ExpressionMS012872
SyntenyMS012872
Gene Ontology termsGO:0016042 - lipid catabolic process (biological process)
GO:0016298 - lipase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598389.1 Patatin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]3.5e-0465.79Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
        L  A+LTAPNENNRP FSA + + F+L H PKI+PQKR
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
KAG7029352.1 Patatin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-0465.79Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
        L  A+LTAPNENNRP FSA + + F+L H PKI+PQKR
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
XP_022996830.1 patatin-like protein 2 [Cucurbita maxima]3.5e-0465.79Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
        L  A+LTAPNENNRP FSA + + F+L H PKI+PQKR
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
XP_023547070.1 patatin-like protein 2 isoform X1 [Cucurbita pepo subsp. pepo]3.5e-0465.79Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
        L  A+LTAPNENNRP FSA + + F+L H PKI+PQKR
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
XP_023547071.1 patatin-like protein 2 isoform X2 [Cucurbita pepo subsp. pepo]3.5e-0465.79Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
        L  A+LTAPNENNRP FSA + + F+L H PKI+PQKR
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
TrEMBL top hitse value%identityAlignment
A0A4S4EI03 Patatin6.4e-0460.53Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
        L  A+LTAPNENNRP F+A + + F+L H PKI+PQ+R
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
A0A6J1GHW0 Patatin2.9e-0463.16Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
        L  A+LT PNENNRP FSA + ++F+L H PKI+PQKR
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
A0A6J1HBN8 Patatin1.7e-0465.79Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
        L  A+LTAPNENNRP FSA + + F+L H PKI+PQKR
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
A0A6J1K7V3 Patatin1.7e-0465.79Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
        L  A+LTAPNENNRP FSA + + F+L H PKI+PQKR
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
A0A7J7HS75 Patatin6.4e-0460.53Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
        L  A+LTAPNENNRP F+A + + F+L H PKI+PQ+R
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR
SwissProt top hitse value%identityAlignment
A2YW91 Patatin-like protein 21.1e-0559.46Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQK
        L  A+LTAPNENNRP F+A    KF++ H P I+PQK
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQK
O23180 Patatin-like protein 56.2e-0455.56Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQ
        L  A+LTAP+EN RP F+A     F+L H PKI+PQ
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQ
Q6ZJD3 Patatin-like protein 21.1e-0559.46Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQK
        L  A+LTAPNENNRP F+A    KF++ H P I+PQK
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQK
Arabidopsis top hitse value%identityAlignment
AT4G37060.1 PATATIN-like protein 54.4e-0555.56Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQ
        L  A+LTAP+EN RP F+A     F+L H PKI+PQ
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQ
AT4G37060.2 PATATIN-like protein 54.4e-0555.56Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQ
        L  A+LTAP+EN RP F+A     F+L H PKI+PQ
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQ
AT4G37070.1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein3.7e-0450Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQ
        L  A+LT P+E  RP F+A +   F+L H PKI+PQ
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQ
AT4G37070.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein3.7e-0450Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQ
        L  A+LT P+E  RP F+A +   F+L H PKI+PQ
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQ
AT4G37070.3 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein3.7e-0450Show/hide
Query:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQ
        L  A+LT P+E  RP F+A +   F+L H PKI+PQ
Subjt:  LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTATCAGCGGCTCTGTTGACGGCCCCTAATGAGAACAACCGCCCTTGGTTCTCTGCCCTTAACCGACAAAAGTTCTTCCTCGTCCACTATCCTAAAATATACCCTCAGAA
AAGG
mRNA sequenceShow/hide mRNA sequence
CTATCAGCGGCTCTGTTGACGGCCCCTAATGAGAACAACCGCCCTTGGTTCTCTGCCCTTAACCGACAAAAGTTCTTCCTCGTCCACTATCCTAAAATATACCCTCAGAA
AAGG
Protein sequenceShow/hide protein sequence
LSAALLTAPNENNRPWFSALNRQKFFLVHYPKIYPQKR