; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012878 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012878
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionrRNA 2'-O-methyltransferase fibrillarin
Genome locationscaffold38:28233..38762
RNA-Seq ExpressionMS012878
SyntenyMS012878
Gene Ontology termsGO:0000494 - box C/D snoRNA 3'-end processing (biological process)
GO:1990258 - histone glutamine methylation (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0051225 - spindle assembly (biological process)
GO:0031167 - rRNA methylation (biological process)
GO:0031122 - cytoplasmic microtubule organization (biological process)
GO:0007020 - microtubule nucleation (biological process)
GO:0000278 - mitotic cell cycle (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0000930 - gamma-tubulin complex (cellular component)
GO:0031428 - box C/D snoRNP complex (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0000923 - equatorial microtubule organizing center (cellular component)
GO:0000922 - spindle pole (cellular component)
GO:0008649 - rRNA methyltransferase activity (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0043015 - gamma-tubulin binding (molecular function)
GO:0051011 - microtubule minus-end binding (molecular function)
GO:1990259 - histone-glutamine methyltransferase activity (molecular function)
InterPro domainsIPR000692 - Fibrillarin
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013251.1 Mediator of RNA polymerase II transcription subunit 36a, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-14391.95Show/hide
Query:  GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQ
        GGGGGFR RGDGGRG R            GRGM SRGGGRGGGRGR GGRGGGMKGGSKVV+EPHRHEGIFIAKGKEDALVT NMVSGESVYNEKRISVQ
Subjt:  GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQ

Query:  NEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM
        NEDGTK+EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGP+GIVYAVEF HRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM
Subjt:  NEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM

Query:  LVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        LVG+VDV+FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
Subjt:  LVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

XP_008439295.1 PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis melo]6.5e-14390.82Show/hide
Query:  IRAGRG-GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYN
        +R  RG GGGGGFR RGDGGRG R            GRGMQSRGGGRGGGRGR GGRGGGMKGGSKVV+EPHRHEGIFIAKGKEDALVT NMV+GESVYN
Subjt:  IRAGRG-GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYN

Query:  EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDAR
        EKRISVQNEDGTK+EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGPTGIVYAVEF HRSGRDLVNMAKKRTNVIPIIEDAR
Subjt:  EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDAR

Query:  HPAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
        HPAKYRMLVG+VDV+FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Subjt:  HPAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK

Query:  QKPAA
        QK AA
Subjt:  QKPAA

XP_022141240.1 mediator of RNA polymerase II transcription subunit 36a-like [Momordica charantia]1.0e-14391.8Show/hide
Query:  IRAGRG-GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYN
        +R  RG GGGGGFR RGDGGRG R            GRGM SRGGGRGGGRGR GGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVT NMVSGESVYN
Subjt:  IRAGRG-GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYN

Query:  EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDAR
        EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGPTGIVYAVEF HRSGRDLVNMAKKRTNVIPIIEDAR
Subjt:  EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDAR

Query:  HPAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
        HPAKYRMLVG+VDV+FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Subjt:  HPAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK

Query:  QKPAA
        QKPAA
Subjt:  QKPAA

XP_022945875.1 probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita moschata]5.0e-14390.82Show/hide
Query:  IRAGRG-GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYN
        +R  RG GGGGGFR RGDGGRG R            GRGM SRGGGRGGGRGR GGRGGGMKGGSKVV+EPHRHEGIFIAKGKEDALVT NMVSGESVYN
Subjt:  IRAGRG-GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYN

Query:  EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDAR
        EKRISVQNEDGTK+EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGP+GIVYAVEF HRSGRDLVNMAKKRTNVIPIIEDAR
Subjt:  EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDAR

Query:  HPAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
        HPAKYRMLVG+VDV+FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Subjt:  HPAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK

Query:  QKPAA
        QKPAA
Subjt:  QKPAA

XP_038875959.1 rRNA 2'-O-methyltransferase fibrillarin 1-like [Benincasa hispida]7.0e-14592.67Show/hide
Query:  GRGGGGGGFRSRGDGGRGAR-----------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRIS
        GRGGGGGGFR RGDGGRG R           GRGMQSRGGGRGGGRGR GGRGGGMKGGSKVV+EPHRHEGIFIAKGKEDALVT NMVSGESVYNEKRIS
Subjt:  GRGGGGGGFRSRGDGGRGAR-----------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRIS

Query:  VQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKY
        VQNEDGTK+EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGPTGIVYAVEF HRSGRDLVNMAKKRTNVIPIIEDARHPAKY
Subjt:  VQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKY

Query:  RMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        RMLVG+VDV+FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQK AA
Subjt:  RMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

TrEMBL top hitse value%identityAlignment
A0A1S3AY25 mediator of RNA polymerase II transcription subunit 36a-like3.2e-14390.82Show/hide
Query:  IRAGRG-GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYN
        +R  RG GGGGGFR RGDGGRG R            GRGMQSRGGGRGGGRGR GGRGGGMKGGSKVV+EPHRHEGIFIAKGKEDALVT NMV+GESVYN
Subjt:  IRAGRG-GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYN

Query:  EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDAR
        EKRISVQNEDGTK+EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGPTGIVYAVEF HRSGRDLVNMAKKRTNVIPIIEDAR
Subjt:  EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDAR

Query:  HPAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
        HPAKYRMLVG+VDV+FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Subjt:  HPAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK

Query:  QKPAA
        QK AA
Subjt:  QKPAA

A0A6J1CHH3 mediator of RNA polymerase II transcription subunit 36a-like4.9e-14491.8Show/hide
Query:  IRAGRG-GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYN
        +R  RG GGGGGFR RGDGGRG R            GRGM SRGGGRGGGRGR GGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVT NMVSGESVYN
Subjt:  IRAGRG-GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYN

Query:  EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDAR
        EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGPTGIVYAVEF HRSGRDLVNMAKKRTNVIPIIEDAR
Subjt:  EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDAR

Query:  HPAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
        HPAKYRMLVG+VDV+FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Subjt:  HPAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK

Query:  QKPAA
        QKPAA
Subjt:  QKPAA

A0A6J1G280 probable mediator of RNA polymerase II transcription subunit 36b2.4e-14390.82Show/hide
Query:  IRAGRG-GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYN
        +R  RG GGGGGFR RGDGGRG R            GRGM SRGGGRGGGRGR GGRGGGMKGGSKVV+EPHRHEGIFIAKGKEDALVT NMVSGESVYN
Subjt:  IRAGRG-GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYN

Query:  EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDAR
        EKRISVQNEDGTK+EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGP+GIVYAVEF HRSGRDLVNMAKKRTNVIPIIEDAR
Subjt:  EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDAR

Query:  HPAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
        HPAKYRMLVG+VDV+FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Subjt:  HPAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK

Query:  QKPAA
        QKPAA
Subjt:  QKPAA

A0A6J1HX74 probable mediator of RNA polymerase II transcription subunit 36b2.4e-14390.82Show/hide
Query:  IRAGRG-GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYN
        +R  RG GGGGGFR RGDGGRG R            GRGM SRGGGRGGGRGR GGRGGGMKGGSKVV+EPHRHEGIFIAKGKEDALVT NMVSGESVYN
Subjt:  IRAGRG-GGGGGFRSRGDGGRGAR------------GRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYN

Query:  EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDAR
        EKRISVQNEDGTK+EYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGP+GIVYAVEF HRSGRDLVNMAKKRTNVIPIIEDAR
Subjt:  EKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDAR

Query:  HPAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
        HPAKYRMLVG+VDV+FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Subjt:  HPAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK

Query:  QKPAA
        QKPAA
Subjt:  QKPAA

A0A6J1JA27 probable mediator of RNA polymerase II transcription subunit 36b2.7e-14291.12Show/hide
Query:  IRAGRG-GGGGGFRSRGDGGRGARGRG-----------MQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNE
        +R  RG GGGGGFR RGDGGRG RGRG             SRGGGRGGGRGR GGRGGGMKGGSKVV+EPHRHEGIFIAKGKEDALVT NMVSGESVYNE
Subjt:  IRAGRG-GGGGGFRSRGDGGRGARGRG-----------MQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNE

Query:  KRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARH
        KRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSD+VGPTGIVYAVEF HRSGRDLVNMAKKRTNVIPIIEDARH
Subjt:  KRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARH

Query:  PAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQ
        PAKYRMLVG+VDV+FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQ
Subjt:  PAKYRMLVGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQ

Query:  KPAA
        K AA
Subjt:  KPAA

SwissProt top hitse value%identityAlignment
P22509 rRNA 2'-O-methyltransferase fibrillarin1.2e-10772.51Show/hide
Query:  GRGGGGGGFRSRGDGGRGARGR-GMQSRGGG--RGGGRGRRGGRGG--GMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDG
        GRGG GGG R RG GG G RGR G   RGGG   GGGRGR GGRGG  G + G  V++EPHRHEG+FI +GKEDALVT N+V GESVY EKR+S+ +E  
Subjt:  GRGGGGGGFRSRGDGGRGARGR-GMQSRGGG--RGGGRGRRGGRGG--GMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDG

Query:  TKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGV
         K+EYR WNPFRSKLAAA+LGGVD I IKPGA+VLYLGAASGTTVSHVSD+VGP G+VYAVEF HRSGRDL+N+AKKRTN+IP+IEDARHP KYRML+ +
Subjt:  TKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGV

Query:  VDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQK
        VDV+F+DVAQPDQ RI+ALNA  FL+ GGHFVISIKANCIDST  AEAVFASEV K++ +  KP EQ+TLEP+ERDHA VVG+YR P K K
Subjt:  VDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQK

P35550 rRNA 2'-O-methyltransferase fibrillarin4.6e-10771.77Show/hide
Query:  GRGGGGGGFRSRGDGGRGARGRGMQSRGGGRGGG------RGRRGGRGG--GMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQN
        GRGG GGG R RG GG G RGRG    GGGRGGG      RGR GGRGG  G + G  V++EPHRHEG+FI +GKEDALVT N+V GESVY EKR+S+ +
Subjt:  GRGGGGGGFRSRGDGGRGARGRGMQSRGGGRGGG------RGRRGGRGG--GMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQN

Query:  EDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRML
        E   K+EYR WNPFRSKLAAA+LGGVD I IKPGA+VLYLGAASGTTVSHVSD+VGP G+VYAVEF HRSGRDL+N+AKKRTN+IP+IEDARHP KYRML
Subjt:  EDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRML

Query:  VGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQK
        + +VDV+F+DVAQPDQ RI+ALNA  FL+ GGHFVISIKANCIDST  AEAVFASEV K++ +  KP EQ+TLEP+ERDHA VVG+YR P K K
Subjt:  VGVVDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQK

Q8I1F4 rRNA 2'-O-methyltransferase fibrillarin1.2e-10773.61Show/hide
Query:  GRGGGGGGFRSRGDGGRGARGRGMQSRGGGRGG---GRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDGTK
        GRGGGGGG    G GG G RG G    GGGRGG   G G RGG  GG KGG  V IEPHRHEG+FIA+GKEDALVT N V G  VY EKRISV+N +G K
Subjt:  GRGGGGGGFRSRGDGGRGARGRGMQSRGGGRGG---GRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDGTK

Query:  VEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGVVD
        +EYRVWNPFRSKLAAAVLGGV+ I + PG++VLYLGAASGTTVSHVSD+VGP G+VYAVEF HRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVG+VD
Subjt:  VEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGVVD

Query:  VVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQ
         +F+DVAQPDQ RI+ALNA +FLK GGHFVISIKA+CIDST   EAVFASEV K++AD+ KP EQ+TLEP+ERDHA VVG+YR P KQ
Subjt:  VVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQ

Q94AH9 rRNA 2'-O-methyltransferase fibrillarin 21.6e-12383.74Show/hide
Query:  GRGGGGGGFRSRGDGGRGARGRGMQSRGGGRGGGRGRRGGRG-GGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDGTKVE
        GRGGGG G   RG   RG RGRG   RG  RGG RG RG  G GGMKGGSKV++EPHRH G+FIAKGKEDALVT N+V GE+VYNEKRISVQNEDGTK E
Subjt:  GRGGGGGGFRSRGDGGRGARGRGMQSRGGGRGGGRGRRGGRG-GGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDGTKVE

Query:  YRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGVVDVV
        YRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSDLVGP G VYAVEF HRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVG+VDV+
Subjt:  YRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGVVDVV

Query:  FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPA
        FSDVAQPDQARILALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEPFERDHACVVG YR PKK K A
Subjt:  FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPA

Q9FEF8 rRNA 2'-O-methyltransferase fibrillarin 11.6e-12382.65Show/hide
Query:  RAGRGGGGGGF---RSRGDGGRGARGRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDG
        R GR GGG GF   RS G G  G RGR    RG GRG  RGR G   GGMKGGSKV++EPHRH G+FIAKGKEDALVT N+V GE+VYNEKRISVQNEDG
Subjt:  RAGRGGGGGGF---RSRGDGGRGARGRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDG

Query:  TKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGV
        TKVEYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSDLVGP G VYAVEF HRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVG+
Subjt:  TKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGV

Query:  VDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        VDV+FSDVAQPDQARILALNAS+FLK GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEPFERDHACVVG YR PKKQK  A
Subjt:  VDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

Arabidopsis top hitse value%identityAlignment
AT4G25630.1 fibrillarin 21.1e-12483.74Show/hide
Query:  GRGGGGGGFRSRGDGGRGARGRGMQSRGGGRGGGRGRRGGRG-GGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDGTKVE
        GRGGGG G   RG   RG RGRG   RG  RGG RG RG  G GGMKGGSKV++EPHRH G+FIAKGKEDALVT N+V GE+VYNEKRISVQNEDGTK E
Subjt:  GRGGGGGGFRSRGDGGRGARGRGMQSRGGGRGGGRGRRGGRG-GGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDGTKVE

Query:  YRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGVVDVV
        YRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSDLVGP G VYAVEF HRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVG+VDV+
Subjt:  YRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGVVDVV

Query:  FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPA
        FSDVAQPDQARILALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEPFERDHACVVG YR PKK K A
Subjt:  FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPA

AT5G52470.1 fibrillarin 11.1e-12482.65Show/hide
Query:  RAGRGGGGGGF---RSRGDGGRGARGRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDG
        R GR GGG GF   RS G G  G RGR    RG GRG  RGR G   GGMKGGSKV++EPHRH G+FIAKGKEDALVT N+V GE+VYNEKRISVQNEDG
Subjt:  RAGRGGGGGGF---RSRGDGGRGARGRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDG

Query:  TKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGV
        TKVEYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSDLVGP G VYAVEF HRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVG+
Subjt:  TKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGV

Query:  VDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        VDV+FSDVAQPDQARILALNAS+FLK GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEPFERDHACVVG YR PKKQK  A
Subjt:  VDVVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

AT5G52470.2 fibrillarin 13.9e-8582.16Show/hide
Query:  RAGRGGGGGGF---RSRGDGGRGARGRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDG
        R GR GGG GF   RS G G  G RGR    RG GRG  RGR G   GGMKGGSKV++EPHRH G+FIAKGKEDALVT N+V GE+VYNEKRISVQNEDG
Subjt:  RAGRGGGGGGF---RSRGDGGRGARGRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDG

Query:  TKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGV
        TKVEYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSDLVGP G VYAVEF HRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVG+
Subjt:  TKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGV

Query:  VDVVFSDVAQPDQ
        VDV+FSDVAQPDQ
Subjt:  VDVVFSDVAQPDQ

AT5G52490.1 Fibrillarin family protein1.6e-9165.16Show/hide
Query:  GRGGGGGGFRSRGDGGRGARGRGMQSRGG--GRGGGRGR-RGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDGTK
        GRGGG  G R    GG G+  RG   RGG  GRG G GR +    GG+KGGSKV++ PHRH G+F+AK K DALVT N+V GE +YNEKRI VQNED + 
Subjt:  GRGGGGGGFRSRGDGGRGARGRGMQSRGG--GRGGGRGR-RGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDGTK

Query:  VEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGVVD
        VEYRVWNP RSKLA A+  GVD+IWIKPG +VLYLGA+SG TVSHVSD+VGP G VYAVE     G+ L+NMA+KRTNVIPIIEDARHPAKYRMLVG+VD
Subjt:  VEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGVVD

Query:  VVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
        ++FSDV  P+QA IL+LNASYFLK+GGHF+ISIKAN IDST+ AE V+  EV KL+ ++ +PTE + L+  E  HACV G YR P+K
Subjt:  VVFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATACGTGCAGGGCGCGGTGGTGGTGGTGGTGGATTTAGGAGCAGGGGTGATGGAGGAAGGGGCGCTAGAGGCAGAGGTATGCAAAGCCGTGGTGGTGGTCGAGGAGGTGG
AAGAGGTCGCCGTGGAGGAAGAGGCGGTGGTATGAAAGGTGGAAGCAAAGTCGTGATTGAACCCCACAGACATGAAGGTATTTTCATAGCCAAGGGCAAAGAAGACGCTC
TTGTCACTAATAATATGGTCTCTGGTGAATCTGTCTACAACGAGAAGAGGATATCCGTACAGAATGAAGATGGAACTAAAGTTGAATACAGAGTTTGGAACCCATTCAGG
TCAAAGTTGGCAGCTGCAGTTCTTGGTGGTGTTGATGACATATGGATTAAACCTGGTGCTCGAGTGTTGTATCTTGGCGCTGCTTCAGGAACAACAGTATCTCATGTATC
AGATCTTGTGGGGCCTACTGGTATAGTGTATGCCGTGGAATTCTATCATAGAAGTGGCAGAGATTTGGTGAACATGGCAAAGAAGCGCACAAATGTTATACCCATCATTG
AAGATGCTAGACACCCTGCCAAGTACCGAATGTTAGTTGGCGTGGTGGATGTGGTTTTTTCAGATGTTGCTCAGCCAGATCAGGCTAGAATTTTGGCACTTAATGCATCA
TATTTTCTCAAGGCGGGTGGCCATTTTGTTATATCAATCAAAGCCAACTGCATCGACTCGACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGCTAAAGGC
AGATCAATTCAAACCCACTGAGCAAGTAACTCTTGAACCATTTGAGCGAGATCATGCTTGTGTTGTTGGTATCTATCGGGCGCCGAAGAAACAGAAGCCCGCTGCA
mRNA sequenceShow/hide mRNA sequence
ATACGTGCAGGGCGCGGTGGTGGTGGTGGTGGATTTAGGAGCAGGGGTGATGGAGGAAGGGGCGCTAGAGGCAGAGGTATGCAAAGCCGTGGTGGTGGTCGAGGAGGTGG
AAGAGGTCGCCGTGGAGGAAGAGGCGGTGGTATGAAAGGTGGAAGCAAAGTCGTGATTGAACCCCACAGACATGAAGGTATTTTCATAGCCAAGGGCAAAGAAGACGCTC
TTGTCACTAATAATATGGTCTCTGGTGAATCTGTCTACAACGAGAAGAGGATATCCGTACAGAATGAAGATGGAACTAAAGTTGAATACAGAGTTTGGAACCCATTCAGG
TCAAAGTTGGCAGCTGCAGTTCTTGGTGGTGTTGATGACATATGGATTAAACCTGGTGCTCGAGTGTTGTATCTTGGCGCTGCTTCAGGAACAACAGTATCTCATGTATC
AGATCTTGTGGGGCCTACTGGTATAGTGTATGCCGTGGAATTCTATCATAGAAGTGGCAGAGATTTGGTGAACATGGCAAAGAAGCGCACAAATGTTATACCCATCATTG
AAGATGCTAGACACCCTGCCAAGTACCGAATGTTAGTTGGCGTGGTGGATGTGGTTTTTTCAGATGTTGCTCAGCCAGATCAGGCTAGAATTTTGGCACTTAATGCATCA
TATTTTCTCAAGGCGGGTGGCCATTTTGTTATATCAATCAAAGCCAACTGCATCGACTCGACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGCTAAAGGC
AGATCAATTCAAACCCACTGAGCAAGTAACTCTTGAACCATTTGAGCGAGATCATGCTTGTGTTGTTGGTATCTATCGGGCGCCGAAGAAACAGAAGCCCGCTGCA
Protein sequenceShow/hide protein sequence
IRAGRGGGGGGFRSRGDGGRGARGRGMQSRGGGRGGGRGRRGGRGGGMKGGSKVVIEPHRHEGIFIAKGKEDALVTNNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFR
SKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDLVGPTGIVYAVEFYHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGVVDVVFSDVAQPDQARILALNAS
YFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA