CuGenDBv2

Gene ID	MS012883
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Genome location	scaffold38:85664..87597
RNA-Seq Expression	MS012883
Synteny	MS012883
Gene Ontology terms	GO:0005634 - nucleus (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6596817.1 hypothetical protein SDJN03_09997, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-85

73.33

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Query:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEV P ISGEDVIEKLKDDGDFD LRLKIIRKLKDNEELR+NI+AIVKQSAALNRAG ENVKPRQLSDAI+DEVGDEIMSKVSDNLWEIIRS DGMKNEI
Subjt:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN
        TETVQS+Y+ LANPK  EDA AST H   V KEA NNG MKASTS  E +E +P+EP G+SFAGNH N EKQHV+E +F +R     D +SR       N
Subjt:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN

Query:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG
        ++ DAD VD  PGF SN  HN+MC D  SDEDPDVPPGFG
Subjt:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG

XP_004147961.1 uncharacterized protein LOC101206797 [Cucumis sativus]

7.3e-100

79.75

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Query:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEV P +SGE VIEKLKDDGDFD LRLKIIRKLKDNEELR+NI+AIVKQSAALNRAGTENVKPRQ+SDAIYDEVG+EIMSKVSDNLWEIIRSADGMKNEI
Subjt:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN
        TETVQSVYNKLANPK  E+A AST H     KE  NNG MKASTS  E SE DPVEPPGFSFAGNH NN +QH+E+ +FP+ HEGRH+ +SRNVEGH+ N
Subjt:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN

Query:  NVCDADVVDLPPGFSSNKDHNRMCKDAGS--DEDPDVPPGFG
        NV DAD VDLPPGF SN+ HN+M KDAGS  DEDPDVPPGFG
Subjt:  NVCDADVVDLPPGFSSNKDHNRMCKDAGS--DEDPDVPPGFG

XP_008448942.1 PREDICTED: uncharacterized protein LOC103490958 [Cucumis melo]

1.4e-95

78.33

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Query:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEV P ISGE VIEKLKDDGDFD LRLKIIRKLKDNEELR+NI+AIVKQSAALNRAGTENVKPRQ+SDAIYDEVG+EIMSKVSDNLWEIIRSADGMKNEI
Subjt:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN
        TETVQSVYNKLANPK  E+A AST H   V KE  NNG MKASTS  E SE DP EPPGFSFAGNH NN KQH+E+ +FP+  EGRH  +SRN+EGH+ N
Subjt:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN

Query:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG
        NV DAD VDLPPGF SN+ HN    D   DEDPDVPPGFG
Subjt:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG

XP_022152780.1 uncharacterized protein LOC111020416 [Momordica charantia]

3.3e-132

100

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Query:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
Subjt:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN
        TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN
Subjt:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN

Query:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG
        NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG
Subjt:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG

XP_038903340.1 uncharacterized protein LOC120089960 [Benincasa hispida]

2.6e-105

84.17

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Query:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        ME+ P ISGEDVIEKLKDDGDFD LRLKIIRKLKDNEELR+NIIAIVKQSAALNRAG ENVKPRQLSDAIYDEVG+EIMSKVSDNLWEIIRSADGMKNEI
Subjt:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN
        TETVQSVYNKLANPK  E+A AST HT  V KE VNNG MKASTS F+ SE DP+EPPGFSFAGNH NN KQHVEE +FP+ HEGRH+ +SRNVEGHH N
Subjt:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN

Query:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG
        NV DAD VDLPPGF SN+ HN+MCKDAGSDEDPDVPPGFG
Subjt:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4H3 Uncharacterized protein

3.6e-100

79.75

Show/hide

Query:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEV P +SGE VIEKLKDDGDFD LRLKIIRKLKDNEELR+NI+AIVKQSAALNRAGTENVKPRQ+SDAIYDEVG+EIMSKVSDNLWEIIRSADGMKNEI
Subjt:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN
        TETVQSVYNKLANPK  E+A AST H     KE  NNG MKASTS  E SE DPVEPPGFSFAGNH NN +QH+E+ +FP+ HEGRH+ +SRNVEGH+ N
Subjt:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN

Query:  NVCDADVVDLPPGFSSNKDHNRMCKDAGS--DEDPDVPPGFG
        NV DAD VDLPPGF SN+ HN+M KDAGS  DEDPDVPPGFG
Subjt:  NVCDADVVDLPPGFSSNKDHNRMCKDAGS--DEDPDVPPGFG

A0A1S3BKW9 uncharacterized protein LOC103490958

6.9e-96

78.33

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Query:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEV P ISGE VIEKLKDDGDFD LRLKIIRKLKDNEELR+NI+AIVKQSAALNRAGTENVKPRQ+SDAIYDEVG+EIMSKVSDNLWEIIRSADGMKNEI
Subjt:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN
        TETVQSVYNKLANPK  E+A AST H   V KE  NNG MKASTS  E SE DP EPPGFSFAGNH NN KQH+E+ +FP+  EGRH  +SRN+EGH+ N
Subjt:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN

Query:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG
        NV DAD VDLPPGF SN+ HN    D   DEDPDVPPGFG
Subjt:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG

A0A6J1DEX6 uncharacterized protein LOC111020416

1.6e-132

100

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Query:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
Subjt:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN
        TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN
Subjt:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN

Query:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG
        NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG
Subjt:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG

A0A6J1FJ59 uncharacterized protein LOC111446176

1.1e-85

73.33

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Query:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEV P ISGEDVIEKLKDDGDFD LRLKIIRKLKDNEELR+NI+AIVKQSAALNRAG ENVKPRQLSDAI+DEVGDEIMSKVSDNLWEIIRS DGMKNEI
Subjt:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN
        TETVQS+Y+ LANPK  EDA AST H   V KEA NNG MKASTS  E +E +P+EP G+SFAGNH N EKQHV+E +F +R     D +SR       N
Subjt:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN

Query:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG
        ++ DAD VD  PGF SN  HN+MC D  SDEDPDVPPGFG
Subjt:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG

A0A6J1KZH9 uncharacterized protein LOC111498492

2.1e-84

71.67

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Query:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        MEV P ISGEDVIEKLKDDGDFD LRLKIIRKLKDNEELR+NI+AIVKQSAALNRAG ENVKPRQLSD I+DEVGDEIMSKVSDNLWEIIRS DGMKNEI
Subjt:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN
        TETVQS+YN LANPK  EDA A+T H   V KEA NNG MKASTS  E +E +P+EP GFSFAGNH N EKQHV+E +F +R                +N
Subjt:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQN

Query:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG
        ++ DAD VD  PGF SN  H++MC D  SDEDPDVPPGFG
Subjt:  NVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G12530.1 unknown protein

1.9e-37

41.32

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Query:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI
        M +   IS E+V+EKLKDDGDFD LRLKIIR+LK+NE+LR+N+I++VK+S +L R G +N+K RQLSDAI++EVG +++S++SD LW IIRS DGMKNEI
Subjt:  MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEI

Query:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSE--PDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHH
         ETVQSVY  L+NP+                         K  TSA E+    P P +     F  + A+ +KQ +                 +     +
Subjt:  TETVQSVYNKLANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSE--PDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHH

Query:  QNNVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG
        +   C  DV D   G + N D          +EDP++PPGFG
Subjt:  QNNVCDADVVDLPPGFSSNKDHNRMCKDAGSDEDPDVPPGFG

AT1G56420.1 unknown protein

1.8e-16

35.1

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Query:  ISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQS
        I  EDV+E L +DG  D LRL+II +LK NEEL+S  I + ++S  LN  G E    R+L DA+  E+   ++ K S ++W++I   DG+  EI ETV+ 
Subjt:  ISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQS

Query:  VYNKLANPKMNEDAGASTDHT-RSVCKEAVNNGFMKASTSAFELSEPDPVE
        V+  L+  +    + ++ + T   + KE       K       LSE +  E
Subjt:  VYNKLANPKMNEDAGASTDHT-RSVCKEAVNNGFMKASTSAFELSEPDPVE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGGTCAGGCCCAATATCAGTGGAGAAGATGTTATCGAAAAGCTCAAGGATGATGGTGACTTCGATAATCTCCGTCTCAAGATCATCCGCAAGCTGAAAGACAATGA
AGAATTGCGCAGTAACATTATTGCTATAGTGAAGCAGTCAGCAGCTCTTAATCGTGCAGGAACTGAAAATGTGAAACCCCGACAGCTTTCTGATGCAATATATGACGAGG
TTGGGGATGAAATAATGAGCAAGGTTTCTGATAACTTATGGGAGATAATCAGATCAGCCGATGGCATGAAAAATGAAATCACAGAAACCGTACAATCCGTCTACAATAAG
TTAGCAAACCCGAAAATGAACGAAGACGCTGGAGCATCCACCGACCACACGAGATCAGTTTGTAAGGAAGCTGTTAACAATGGTTTTATGAAGGCCTCCACCAGTGCATT
TGAACTTTCTGAGCCTGATCCTGTAGAACCTCCAGGTTTCTCCTTTGCTGGTAATCATGCAAACAATGAGAAGCAACATGTAGAGGAGACGCGATTTCCAGAACGTCATG
AAGGAAGGCATGATTATAATAGTCGAAATGTAGAGGGACACCATCAGAATAATGTGTGTGATGCAGATGTTGTTGATCTGCCACCAGGCTTTTCTTCAAACAAGGACCAC
AACCGAATGTGTAAAGATGCTGGTAGTGATGAGGACCCAGATGTGCCCCCTGGTTTTGGC

mRNA sequence

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Protein sequence

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MEVRPNISGEDVIEKLKDDGDFDNLRLKIIRKLKDNEELRSNIIAIVKQSAALNRAGTENVKPRQLSDAIYDEVGDEIMSKVSDNLWEIIRSADGMKNEITETVQSVYNK
LANPKMNEDAGASTDHTRSVCKEAVNNGFMKASTSAFELSEPDPVEPPGFSFAGNHANNEKQHVEETRFPERHEGRHDYNSRNVEGHHQNNVCDADVVDLPPGFSSNKDH
NRMCKDAGSDEDPDVPPGFG

MS012883 (gene) of Bitter gourd (TR) v1 genome