; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012899 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012899
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionycf49-like protein
Genome locationscaffold38:215437..218455
RNA-Seq ExpressionMS012899
SyntenyMS012899
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019634 - Uncharacterised protein family Ycf49


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596827.1 hypothetical protein SDJN03_10007, partial [Cucurbita argyrosperma subsp. sororia]6.1e-8485.37Show/hide
Query:  MPLTSTLLHSFSNPKCPISSSSSSS---PPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESA---SAAVELQALGASSLQFN
        M LTSTL  SFSNPKCPISSSSSSS   P  + DFAA SQA   IRF RIIGAGL LDSK+MVVL+GTG TLALLGPESA   +AA ELQ+LGASSLQFN
Subjt:  MPLTSTLLHSFSNPKCPISSSSSSS---PPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESA---SAAVELQALGASSLQFN

Query:  EPQNALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQE
        EPQNALSLPTWAIHVSSVVEWITAMALVWQYGEKSG+E+WKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK SQE
Subjt:  EPQNALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQE

Query:  RSRNL
        RS  L
Subjt:  RSRNL

XP_022152779.1 uncharacterized protein LOC111020415 [Momordica charantia]3.8e-10298.48Show/hide
Query:  MPLTSTLLHSFSNPKCPISSSSSSSPPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESASAAVELQALGASSLQFNEPQNAL
        MPLTSTLLHSFSNPKCPISSSSSSSPPRSRDFAAPS+ PPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESASAA ELQALGASSLQFNEPQNAL
Subjt:  MPLTSTLLHSFSNPKCPISSSSSSSPPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESASAAVELQALGASSLQFNEPQNAL

Query:  SLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSQERSRNL
        SLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSQERSRNL
Subjt:  SLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSQERSRNL

XP_022944188.1 uncharacterized protein LOC111448709 [Cucurbita moschata]4.7e-8485.78Show/hide
Query:  MPLTSTLLHSFSNPKCPISSSSSSS--PPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESA---SAAVELQALGASSLQFNE
        M LTSTL  SFSNPKCPISSSSSSS  P  + DFAA SQA   IRF RIIGAGL LDSK+MVVL+GTG TLALLGPESA   +AA ELQ+LGASSLQFNE
Subjt:  MPLTSTLLHSFSNPKCPISSSSSSS--PPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESA---SAAVELQALGASSLQFNE

Query:  PQNALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQER
        PQNALSLPTWAIHVSSVVEWITAMALVWQYGEKSG+E+WKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK SQER
Subjt:  PQNALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQER

Query:  SRNL
        S  L
Subjt:  SRNL

XP_023005556.1 uncharacterized protein LOC111498507 [Cucurbita maxima]4.1e-8889.6Show/hide
Query:  MPLTSTLLHSFSNPKCPISSSSSSSPPRS-RDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPES--ASAAVELQALGASSLQFNEPQ
        M LTSTLLHSFSNPKCPISSSSSSS PRS  DFAA SQA  GIRF RIIGAGL LDSK+MVVL+GTG TLALLGPES  A+AA ELQ+LGASSLQFNEPQ
Subjt:  MPLTSTLLHSFSNPKCPISSSSSSSPPRS-RDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPES--ASAAVELQALGASSLQFNEPQ

Query:  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQERSR
        NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNE+WKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK SQERS 
Subjt:  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQERSR

Query:  NL
         L
Subjt:  NL

XP_023539827.1 uncharacterized protein LOC111800391 [Cucurbita pepo subsp. pepo]5.9e-8788.18Show/hide
Query:  MPLTSTLLHSFSNPKCPISSSSSSSPPRS-RDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESA---SAAVELQALGASSLQFNEP
        M LTSTL HSFSNPKCPISSSSSSS PRS  DFAA SQA  GIRF R IGAGL LDSK+MVVL+GTG TLALLGPESA   +AA ELQ+LGASSLQFNEP
Subjt:  MPLTSTLLHSFSNPKCPISSSSSSSPPRS-RDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESA---SAAVELQALGASSLQFNEP

Query:  QNALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQERS
        QNALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNE+WKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK SQERS
Subjt:  QNALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQERS

Query:  RNL
          L
Subjt:  RNL

TrEMBL top hitse value%identityAlignment
A0A1S3BLS2 ycf49-like protein1.1e-7378.39Show/hide
Query:  MPLTSTLLHSFSNPKCPISSSSSSSPPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESASAAVELQALGASSLQFNEPQNAL
        M LTS LL+SFS PK P+        P S DFA  +Q P G+ FRR I + L   SK+MVVLLGTGFTLALLGPESASAA ELQ    SSL FNEPQNAL
Subjt:  MPLTSTLLHSFSNPKCPISSSSSSSPPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESASAAVELQALGASSLQFNEPQNAL

Query:  SLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQERSRNL
        SLPTWAIHVSSVVEWITAMALVWQYGEKSGNE+WKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVA+QA+LTA+GNATMCIAAFRIYK SQERS+NL
Subjt:  SLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQERSRNL

A0A6J1DH09 uncharacterized protein LOC1110204151.8e-10298.48Show/hide
Query:  MPLTSTLLHSFSNPKCPISSSSSSSPPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESASAAVELQALGASSLQFNEPQNAL
        MPLTSTLLHSFSNPKCPISSSSSSSPPRSRDFAAPS+ PPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESASAA ELQALGASSLQFNEPQNAL
Subjt:  MPLTSTLLHSFSNPKCPISSSSSSSPPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESASAAVELQALGASSLQFNEPQNAL

Query:  SLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSQERSRNL
        SLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSQERSRNL
Subjt:  SLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSQERSRNL

A0A6J1E5R7 uncharacterized protein LOC1114310332.1e-7479.9Show/hide
Query:  MPLTSTLLHSFSNPKCPISSSSSSSPPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESASAAVELQALGASSLQFNEPQNAL
        M  +ST LHSFS PKCPISSSSSS  P SR  AA SQ P GIR RR  GAG VLDSKS++VLLGTGFTL+ LGP S SAA E Q    SSL FNEPQNAL
Subjt:  MPLTSTLLHSFSNPKCPISSSSSSSPPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESASAAVELQALGASSLQFNEPQNAL

Query:  SLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQERSRNL
        SLPTWA+HVS VVEWI AMALVWQYGEKSGNE+WKGLSWGMVPLLGGAFCACT HFFYNSESLEVLVALQA+LT +GNATMCIAAFRIYK SQERS+NL
Subjt:  SLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQERSRNL

A0A6J1FXT1 uncharacterized protein LOC1114487092.3e-8485.78Show/hide
Query:  MPLTSTLLHSFSNPKCPISSSSSSS--PPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESA---SAAVELQALGASSLQFNE
        M LTSTL  SFSNPKCPISSSSSSS  P  + DFAA SQA   IRF RIIGAGL LDSK+MVVL+GTG TLALLGPESA   +AA ELQ+LGASSLQFNE
Subjt:  MPLTSTLLHSFSNPKCPISSSSSSS--PPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESA---SAAVELQALGASSLQFNE

Query:  PQNALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQER
        PQNALSLPTWAIHVSSVVEWITAMALVWQYGEKSG+E+WKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK SQER
Subjt:  PQNALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQER

Query:  SRNL
        S  L
Subjt:  SRNL

A0A6J1KVA7 uncharacterized protein LOC1114985072.0e-8889.6Show/hide
Query:  MPLTSTLLHSFSNPKCPISSSSSSSPPRS-RDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPES--ASAAVELQALGASSLQFNEPQ
        M LTSTLLHSFSNPKCPISSSSSSS PRS  DFAA SQA  GIRF RIIGAGL LDSK+MVVL+GTG TLALLGPES  A+AA ELQ+LGASSLQFNEPQ
Subjt:  MPLTSTLLHSFSNPKCPISSSSSSSPPRS-RDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPES--ASAAVELQALGASSLQFNEPQ

Query:  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQERSR
        NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNE+WKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK SQERS 
Subjt:  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK-SQERSR

Query:  NL
         L
Subjt:  NL

SwissProt top hitse value%identityAlignment
P15811 Uncharacterized protein ycf499.7e-0835.79Show/hide
Query:  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSQ
        N LS  TW +H+SSV+EW+  +     Y +   N + K   +        A CACT HFF N      L+ LQ+ LT   N T+  +   IYK Q
Subjt:  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSQ

Q55720 Ycf49-like protein1.4e-2759.14Show/hide
Query:  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK
        NALS+PTW +HVSSV+EWI A+ALV +Y  K+G   W+ L+WGMVP L  A CACTWHFF N+  L+ LV LQA+ T +GN T+C+AA+ IY+
Subjt:  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK

Q9TM18 Uncharacterized protein ycf492.2e-0435.29Show/hide
Query:  ALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPL-----LGGAFCACTWHFFYNSESLEVLVALQAILTAVGN
        +LSLPTW IH+ ++VEW   + L++ +      +  +  ++ ++ L     L G F AC WHFF N+  L  +   QA LTA  N
Subjt:  ALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPL-----LGGAFCACTWHFFYNSESLEVLVALQAILTAVGN

Arabidopsis top hitse value%identityAlignment
AT4G22830.1 unknown protein1.6e-4554.92Show/hide
Query:  MPLTSTLLHSFSNPKCPISSSSSSSPPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALL---GPESASAAVELQALGASSLQFNEPQ
        M + ST    F   K       S S P S   +  +   P IR R      L+ D  ++  L+GT    A     GP++ + A  +      SLQ +EP 
Subjt:  MPLTSTLLHSFSNPKCPISSSSSSSPPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALL---GPESASAAVELQALGASSLQFNEPQ

Query:  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK
        NALSLPTWA+HVSSVVEWITAMALVW+YGE+ G E+WKGLSWGMVPLLGGA CACTWHFFYN ESLEVLVALQA LT  GN T+CIAAFRI K
Subjt:  NALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK

AT4G22830.2 unknown protein2.8e-4764.19Show/hide
Query:  RIIGAGLVLDSKSMVVLLGTGFTLALL---GPESASAAVELQALGASSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMV
        RI    L+ D  ++  L+GT    A     GP++ + A  +      SLQ +EP NALSLPTWA+HVSSVVEWITAMALVW+YGE+ G E+WKGLSWGMV
Subjt:  RIIGAGLVLDSKSMVVLLGTGFTLALL---GPESASAAVELQALGASSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNEAWKGLSWGMV

Query:  PLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK
        PLLGGA CACTWHFFYN ESLEVLVALQA LT  GN T+CIAAFRI K
Subjt:  PLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACTCACTTCCACCTTGTTACATTCATTCTCAAATCCCAAATGTCCAATTTCTTCTTCTTCTTCTTCCTCGCCGCCGAGGTCTAGAGACTTCGCCGCTCCTTCTCA
AGCTCCTCCCGGAATCAGATTCCGGAGAATTATCGGCGCCGGTCTGGTTTTGGACTCGAAATCCATGGTGGTTTTGCTCGGCACGGGCTTCACGCTGGCCCTTCTGGGAC
CTGAATCGGCTTCAGCTGCGGTGGAATTGCAGGCGTTGGGTGCTTCTTCGTTGCAATTTAATGAGCCCCAGAATGCTCTCTCGTTGCCCACCTGGGCCATTCATGTTTCC
AGCGTTGTTGAGTGGATTACAGCAATGGCTTTGGTGTGGCAATATGGAGAGAAATCTGGCAATGAGGCCTGGAAGGGACTTTCCTGGGGCATGGTGCCATTGCTAGGTGG
AGCATTTTGTGCTTGTACATGGCATTTTTTCTACAATTCCGAATCTCTCGAGGTTCTGGTGGCCCTTCAAGCAATACTGACGGCCGTAGGGAATGCCACAATGTGTATTG
CTGCATTTCGCATATACAAATCACAAGAACGTTCAAGGAACTTG
mRNA sequenceShow/hide mRNA sequence
ATGCCACTCACTTCCACCTTGTTACATTCATTCTCAAATCCCAAATGTCCAATTTCTTCTTCTTCTTCTTCCTCGCCGCCGAGGTCTAGAGACTTCGCCGCTCCTTCTCA
AGCTCCTCCCGGAATCAGATTCCGGAGAATTATCGGCGCCGGTCTGGTTTTGGACTCGAAATCCATGGTGGTTTTGCTCGGCACGGGCTTCACGCTGGCCCTTCTGGGAC
CTGAATCGGCTTCAGCTGCGGTGGAATTGCAGGCGTTGGGTGCTTCTTCGTTGCAATTTAATGAGCCCCAGAATGCTCTCTCGTTGCCCACCTGGGCCATTCATGTTTCC
AGCGTTGTTGAGTGGATTACAGCAATGGCTTTGGTGTGGCAATATGGAGAGAAATCTGGCAATGAGGCCTGGAAGGGACTTTCCTGGGGCATGGTGCCATTGCTAGGTGG
AGCATTTTGTGCTTGTACATGGCATTTTTTCTACAATTCCGAATCTCTCGAGGTTCTGGTGGCCCTTCAAGCAATACTGACGGCCGTAGGGAATGCCACAATGTGTATTG
CTGCATTTCGCATATACAAATCACAAGAACGTTCAAGGAACTTG
Protein sequenceShow/hide protein sequence
MPLTSTLLHSFSNPKCPISSSSSSSPPRSRDFAAPSQAPPGIRFRRIIGAGLVLDSKSMVVLLGTGFTLALLGPESASAAVELQALGASSLQFNEPQNALSLPTWAIHVS
SVVEWITAMALVWQYGEKSGNEAWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSQERSRNL