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MS012904 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012904
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein cornichon homolog 4-like
Genome locationscaffold38:277449..278656
RNA-Seq ExpressionMS012904
SyntenyMS012904
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003377 - Cornichon


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152805.1 protein cornichon homolog 4-like [Momordica charantia]1.5e-4998.04Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        LMCLADLEFDYINPYDSASRINQVIMPEF AVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQR FKLVYLVFLLFLSI
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

XP_022923576.1 protein cornichon homolog 4-like [Cucurbita moschata]2.6e-4687.25Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        LMCLADLEFDYINPYDSASRIN+V+MPEF+A+G+LCLFYLLTGHW MS+ CGPYIYYNVRLYLRRQ+L+DVTEIFNMLNWEKK+R+FKL YLVFLLFLSI
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

XP_022965215.1 protein cornichon homolog 4-like [Cucurbita maxima]2.0e-4688.24Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        LMCLADLEFDYINPYDSASRIN+V+MPEFIA+G+LCLFYLLTGHW MS+ CGPYIYYNVRLYLRRQ+L+DVTEIFNMLNWEKK+R+FKL YLVFLLFLSI
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

XP_023005595.1 protein cornichon homolog 4-like [Cucurbita maxima]2.6e-4688.24Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        LMCLADLEFDYINPYDSASRIN+VI PEFI++G+LCLFYLLTGHW MS+ CGPYIYYNVR+YLRRQHLIDVTEIFNMLNWEKKQR+FKL YLVFLLFLS+
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

XP_038876883.1 protein cornichon homolog 4-like [Benincasa hispida]4.0e-4790.2Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        LMCLADLEFDYINPYDSASRIN+VI+PEF++VG+LCLFYLLTGHW MS+ CGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQR+FKL YLVFLLFLSI
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

TrEMBL top hitse value%identityAlignment
A0A1S3BLR3 protein cornichon homolog 4 isoform X13.7e-4688.24Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        LMCLADLEFDYINPYDSASRIN+VIMPEF+A+G+LCLFYLLTGHW MS+ CGPYIYYNVRLYLRRQ+L+DVTEIFNMLNWEKKQR+FKL YLV LLFLSI
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

A0A6J1DIV4 protein cornichon homolog 4-like7.1e-5098.04Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        LMCLADLEFDYINPYDSASRINQVIMPEF AVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQR FKLVYLVFLLFLSI
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

A0A6J1E6H8 protein cornichon homolog 4-like1.3e-4687.25Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        LMCLADLEFDYINPYDSASRIN+V+MPEF+A+G+LCLFYLLTGHW MS+ CGPYIYYNVRLYLRRQ+L+DVTEIFNMLNWEKK+R+FKL YLVFLLFLSI
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

A0A6J1HL36 protein cornichon homolog 4-like9.6e-4788.24Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        LMCLADLEFDYINPYDSASRIN+V+MPEFIA+G+LCLFYLLTGHW MS+ CGPYIYYNVRLYLRRQ+L+DVTEIFNMLNWEKK+R+FKL YLVFLLFLSI
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

A0A6J1KXU1 protein cornichon homolog 4-like1.3e-4688.24Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        LMCLADLEFDYINPYDSASRIN+VI PEFI++G+LCLFYLLTGHW MS+ CGPYIYYNVR+YLRRQHLIDVTEIFNMLNWEKKQR+FKL YLVFLLFLS+
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

SwissProt top hitse value%identityAlignment
Q3EDD7 Probable protein cornichon homolog 22.6e-4174.51Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        L+CLADLEFDYINPYDSASRIN V++PEFI  G+LC+FYLLTGHW M+L C PY+YYN  LY +RQHL+DVTEIFN+LNWEKK+R+FKL Y+V  LFL+I
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

Q84W04 Protein cornichon homolog 42.6e-4174.51Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        L+CLADLEFDYINPYDSASRIN V++PEFI  G+LC+FYLLTGHW M+L C PY+YYN  LY +RQHL+DVTEIFN+LNWEKK+R+FKL Y+V  LFL+I
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

Q8GWT5 Protein cornichon homolog 37.9e-3870.59Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        L+ LADLEFDYINPYDSASRIN V++PE I  G LC+FYL+TGHW M+L C PY+YYN  LY R+QHLIDVTEIFN+L+WEKK+R+FKL Y++  LFL+I
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

Q9C7D7 Protein cornichon homolog 15.1e-2147.52Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        ++CL DLE DY+NP+++++RIN++++PEFI  G LCL +LLT HW   L   P   Y+  LY  R++LIDVTE+F  +++EKK R  KL + VFL  + +
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  F
        F
Subjt:  F

Q9SZ74 Protein cornichon homolog 51.8e-2951.96Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        L CLADLEFD INPYD +SRIN++++PEF   G+LCL+Y+LTGHW M++   P+++YN+RLY++R+HL DVTE++N   WE+K+R++K+ ++   +F++ 
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        +W
Subjt:  FW

Arabidopsis top hitse value%identityAlignment
AT1G12340.1 Cornichon family protein1.9e-4274.51Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        L+CLADLEFDYINPYDSASRIN V++PEFI  G+LC+FYLLTGHW M+L C PY+YYN  LY +RQHL+DVTEIFN+LNWEKK+R+FKL Y+V  LFL+I
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

AT1G12390.1 Cornichon family protein1.9e-4274.51Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        L+CLADLEFDYINPYDSASRIN V++PEFI  G+LC+FYLLTGHW M+L C PY+YYN  LY +RQHL+DVTEIFN+LNWEKK+R+FKL Y+V  LFL+I
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

AT1G62880.1 Cornichon family protein5.6e-3970.59Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        L+ LADLEFDYINPYDSASRIN V++PE I  G LC+FYL+TGHW M+L C PY+YYN  LY R+QHLIDVTEIFN+L+WEKK+R+FKL Y++  LFL+I
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        FW
Subjt:  FW

AT3G12180.1 Cornichon family protein3.6e-2247.52Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        ++CL DLE DY+NP+++++RIN++++PEFI  G LCL +LLT HW   L   P   Y+  LY  R++LIDVTE+F  +++EKK R  KL + VFL  + +
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  F
        F
Subjt:  F

AT4G12090.1 Cornichon family protein1.2e-3051.96Show/hide
Query:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI
        L CLADLEFD INPYD +SRIN++++PEF   G+LCL+Y+LTGHW M++   P+++YN+RLY++R+HL DVTE++N   WE+K+R++K+ ++   +F++ 
Subjt:  LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSI

Query:  FW
        +W
Subjt:  FW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGATGTGCTTGGCGGATCTTGAGTTTGATTATATCAACCCTTATGACTCTGCTTCTCGAATAAACCAAGTGATTATGCCGGAGTTCATTGCTGTAGGAATTTTGTGCCT
CTTCTATCTTTTAACAGGGCATTGGGCTATGTCACTGTTTTGTGGGCCCTACATATATTATAATGTGAGATTGTACCTACGAAGACAGCATCTGATAGATGTTACAGAGA
TATTCAATATGCTAAATTGGGAAAAGAAACAACGGATTTTCAAACTAGTCTATCTAGTTTTCCTCCTCTTCCTCTCTATATTTTGG
mRNA sequenceShow/hide mRNA sequence
CTGATGTGCTTGGCGGATCTTGAGTTTGATTATATCAACCCTTATGACTCTGCTTCTCGAATAAACCAAGTGATTATGCCGGAGTTCATTGCTGTAGGAATTTTGTGCCT
CTTCTATCTTTTAACAGGGCATTGGGCTATGTCACTGTTTTGTGGGCCCTACATATATTATAATGTGAGATTGTACCTACGAAGACAGCATCTGATAGATGTTACAGAGA
TATTCAATATGCTAAATTGGGAAAAGAAACAACGGATTTTCAAACTAGTCTATCTAGTTTTCCTCCTCTTCCTCTCTATATTTTGG
Protein sequenceShow/hide protein sequence
LMCLADLEFDYINPYDSASRINQVIMPEFIAVGILCLFYLLTGHWAMSLFCGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRIFKLVYLVFLLFLSIFW