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MS012920 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012920
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionnon-specific lipid transfer protein-like 1
Genome locationscaffold38:459745..460062
RNA-Seq ExpressionMS012920
SyntenyMS012920
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily
IPR043325 - Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577605.1 hypothetical protein SDJN03_25179, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3066.98Show/hide
Query:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD
        MA   +SV   AV ++ VVV A G   AQ PDCA KL  CA FLKS+NPPA+CC+PIKEAVATQL CLCNLYTSPDF  S+GVN++DA+HL+KACGVPVD
Subjt:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD

Query:  INKCKS
        ++KCK+
Subjt:  INKCKS

XP_004147939.1 lipid transfer-like protein VAS [Cucumis sativus]1.9e-3166.04Show/hide
Query:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD
        MAR +ISV  + V ++ +VVA A L A ++PDC  KLT+C  FLKS+NPPA+CCDPIKEAVATQLPCLCNLYT+P  L S GVN+TDAIHL+ ACGVPV+
Subjt:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD

Query:  INKCKS
        ++KCK+
Subjt:  INKCKS

XP_022923450.1 non-specific lipid transfer protein-like 1 [Cucurbita moschata]1.2e-3070.53Show/hide
Query:  AVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKCKS
        +VV + VVV A G   AQ PDCA KL +CA FLKS+NPPA+CC+PIKEAVATQL CLCNLYTSPDF  S+GVN++DA+HL+KACGVPVD++KCK+
Subjt:  AVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKCKS

XP_023552770.1 non-specific lipid transfer protein-like 1 [Cucurbita pepo subsp. pepo]4.9e-3267.92Show/hide
Query:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD
        MA   +SV   AV ++ VVVAA G   AQ PDCA KL  CA FLKS+NPPA+CC+PIKEAVATQL CLCNLYTSPDF  S+GVN++DA+HL+KACGVPVD
Subjt:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD

Query:  INKCKS
        + KCK+
Subjt:  INKCKS

XP_038876834.1 non-specific lipid transfer protein GPI-anchored 8 [Benincasa hispida]6.5e-3267.92Show/hide
Query:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD
        MAR ++SVA  AVV + VV+ A     AQ+PDCA KL  CA FLKS+NPPA+CCDPIKEAVATQL CLCNLY+SPDFL S+GVN++DA+HL+KACGVPV+
Subjt:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD

Query:  INKCKS
        ++KCK+
Subjt:  INKCKS

TrEMBL top hitse value%identityAlignment
A0A0A0L702 AAI domain-containing protein9.1e-3266.04Show/hide
Query:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD
        MAR +ISV  + V ++ +VVA A L A ++PDC  KLT+C  FLKS+NPPA+CCDPIKEAVATQLPCLCNLYT+P  L S GVN+TDAIHL+ ACGVPV+
Subjt:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD

Query:  INKCKS
        ++KCK+
Subjt:  INKCKS

A0A1S3BK67 non-specific lipid-transfer protein 11.2e-2861.32Show/hide
Query:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD
        MA  +ISV  A V ++ + VA   + A  +PDC  KLT C  FLKS+NPPA+CCDPIKEAVATQLPCLCNLY +P  L S GVN++DAIHL+ ACGVPV+
Subjt:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD

Query:  INKCKS
        ++KCK+
Subjt:  INKCKS

A0A5D3D7F6 Non-specific lipid-transfer protein 16.5e-3063.21Show/hide
Query:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD
        MAR +ISV  A V ++ +VVA   + A  +PDC  KLT C  FLKS+NPPA+CCDPIKEAVATQLPCLCNLY +P  L S GVN++DAIHL+ ACGVPV+
Subjt:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD

Query:  INKCKS
        ++KCK+
Subjt:  INKCKS

A0A6J1EBU7 non-specific lipid transfer protein-like 15.9e-3170.53Show/hide
Query:  AVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKCKS
        +VV + VVV A G   AQ PDCA KL +CA FLKS+NPPA+CC+PIKEAVATQL CLCNLYTSPDF  S+GVN++DA+HL+KACGVPVD++KCK+
Subjt:  AVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKCKS

A0A6J1HJR7 non-specific lipid transfer protein-like 15.5e-2965.09Show/hide
Query:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD
        MA   +SV   AV  +AVVV   G   AQ PDCA KL  CA+FLKS+NPPA+CC+PIKEAVATQL CLCNLYTSPDF  S+GVN++DA+HL+KACGV  D
Subjt:  MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVD

Query:  INKCKS
        ++KCK+
Subjt:  INKCKS

SwissProt top hitse value%identityAlignment
B3H587 Non-specific lipid transfer protein GPI-anchored 81.2e-0430.1Show/hide
Query:  RQISVANAAVVIIAVVVAAAGLA-AAQIPDCAEKLTACASFLK-SDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDI
        R + V    V++ +V V A       Q   C  KL  C  ++  S  PP  CC+P+K+     + CLC  +  PD L  L +   +AI +  +CG+  D 
Subjt:  RQISVANAAVVIIAVVVAAAGLA-AAQIPDCAEKLTACASFLK-SDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDI

Query:  NKC
        + C
Subjt:  NKC

Q1G2Y5 Non-specific lipid transfer protein GPI-anchored 215.3e-0534.62Show/hide
Query:  PDCAEKLTACASFLKSDN--PPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKCKS
        P     +T C SFL      P + CC  +K    T + CLC + T+   + S+ +N T AI L +ACG+P    +CK+
Subjt:  PDCAEKLTACASFLKSDN--PPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKCKS

Q1PFD8 Non-specific lipid transfer protein GPI-anchored 91.5e-1040Show/hide
Query:  AVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDN--PPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKC
        AVV++  V A A     Q+  C +KL  C  ++ S N  PP SCC P+KE V    PCLC  + +P+ L +L +   +A+ L KACGV  D++ C
Subjt:  AVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDN--PPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKC

Q6NLF7 Non-specific lipid transfer protein GPI-anchored 73.0e-0836.84Show/hide
Query:  AAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPA-SCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKC
        AA+ ++A+++     A     +C  KL  C + L +   P   CCD IKEAV  +L CLC +YTSP  L    V    A+ LS+ C V  D++ C
Subjt:  AAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPA-SCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKC

Q9LE56 Non-specific lipid transfer protein GPI-anchored 37.2e-1040Show/hide
Query:  AGLAAAQIPDCAEKLTACASFLK-SDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKCKS
        AG  A  +P C +KL  C  +L  +  PPA+CC P+ E VA    CLC ++ + D L SL +   +A+ L KACG   D++ CK+
Subjt:  AGLAAAQIPDCAEKLTACASFLK-SDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKCKS

Arabidopsis top hitse value%identityAlignment
AT1G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.1e-1140Show/hide
Query:  AGLAAAQIPDCAEKLTACASFLK-SDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKCKS
        AG  A  +P C +KL  C  +L  +  PPA+CC P+ E VA    CLC ++ + D L SL +   +A+ L KACG   D++ CK+
Subjt:  AGLAAAQIPDCAEKLTACASFLK-SDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKCKS

AT1G62790.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.2e-0936.84Show/hide
Query:  AAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPA-SCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKC
        AA+ ++A+++     A     +C  KL  C + L +   P   CCD IKEAV  +L CLC +YTSP  L    V    A+ LS+ C V  D++ C
Subjt:  AAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPA-SCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKC

AT1G62790.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.2e-0936.84Show/hide
Query:  AAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPA-SCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKC
        AA+ ++A+++     A     +C  KL  C + L +   P   CCD IKEAV  +L CLC +YTSP  L    V    A+ LS+ C V  D++ C
Subjt:  AAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPA-SCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKC

AT1G73550.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein8.5e-0630.1Show/hide
Query:  RQISVANAAVVIIAVVVAAAGLA-AAQIPDCAEKLTACASFLK-SDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDI
        R + V    V++ +V V A       Q   C  KL  C  ++  S  PP  CC+P+K+     + CLC  +  PD L  L +   +AI +  +CG+  D 
Subjt:  RQISVANAAVVIIAVVVAAAGLA-AAQIPDCAEKLTACASFLK-SDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDI

Query:  NKC
        + C
Subjt:  NKC

AT1G73560.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.0e-1140Show/hide
Query:  AVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDN--PPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKC
        AVV++  V A A     Q+  C +KL  C  ++ S N  PP SCC P+KE V    PCLC  + +P+ L +L +   +A+ L KACGV  D++ C
Subjt:  AVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDN--PPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGCAGGCAGATCTCCGTCGCGAACGCCGCCGTGGTCATCATTGCGGTGGTGGTGGCCGCCGCTGGCTTGGCGGCGGCGCAGATACCGGACTGTGCTGAGAAGTT
GACGGCGTGCGCGTCGTTCTTGAAGTCCGATAACCCGCCGGCGTCGTGCTGCGATCCGATCAAGGAGGCGGTGGCGACGCAGCTCCCGTGCCTCTGCAACCTCTACACCT
CGCCGGATTTCTTGCCATCGCTCGGCGTTAATCTCACCGACGCCATCCATCTCAGTAAAGCCTGCGGCGTCCCCGTCGATATCAATAAGTGCAAAAGT
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGCAGGCAGATCTCCGTCGCGAACGCCGCCGTGGTCATCATTGCGGTGGTGGTGGCCGCCGCTGGCTTGGCGGCGGCGCAGATACCGGACTGTGCTGAGAAGTT
GACGGCGTGCGCGTCGTTCTTGAAGTCCGATAACCCGCCGGCGTCGTGCTGCGATCCGATCAAGGAGGCGGTGGCGACGCAGCTCCCGTGCCTCTGCAACCTCTACACCT
CGCCGGATTTCTTGCCATCGCTCGGCGTTAATCTCACCGACGCCATCCATCTCAGTAAAGCCTGCGGCGTCCCCGTCGATATCAATAAGTGCAAAAGT
Protein sequenceShow/hide protein sequence
MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKCKS