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MS012941 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012941
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNuclear pore complex protein
Genome locationscaffold38:723931..724125
RNA-Seq ExpressionMS012941
SyntenyMS012941
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD47822.1 TPA_asm: hypothetical protein HUJ06_017758 [Nelumbo nucifera]1.3e-1174Show/hide
Query:  VHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV
        V +Q AASSSN PP TGQ  FSTGFPNP CTNPP TS HNP+F+A IGHV
Subjt:  VHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV

PON53860.1 hypothetical protein PanWU01x14_200220 [Parasponia andersonii]1.1e-1368.25Show/hide
Query:  INMFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV
        +NM +  SL L  V +QMAASSS+SPP TGQ  FSTG PNPICTNPPSTST +PNF A IG V
Subjt:  INMFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV

PON92991.1 hypothetical protein TorRG33x02_112700 [Trema orientale]1.1e-1368.25Show/hide
Query:  INMFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV
        +NM +  SL L  V +QMAASSS+SPP TGQ  FSTG PNPICTNPPSTST +PNF A IG V
Subjt:  INMFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV

PPD79682.1 hypothetical protein GOBAR_DD23400 [Gossypium barbadense]7.0e-1367.21Show/hide
Query:  MFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV
        M +F SL L  V +Q AASSS+ PP TGQ AFSTG PNPICTNPPSTSTH+P+ +A  GHV
Subjt:  MFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV

PPR99310.1 hypothetical protein GOBAR_AA21353 [Gossypium barbadense]5.4e-1365.08Show/hide
Query:  INMFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV
        + M +F SL L  V +Q AASSS+ PP TGQ AFSTG PNPICTNPPSTSTH+P+ +A  GHV
Subjt:  INMFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV

TrEMBL top hitse value%identityAlignment
A0A2P5BYJ2 Uncharacterized protein5.2e-1468.25Show/hide
Query:  INMFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV
        +NM +  SL L  V +QMAASSS+SPP TGQ  FSTG PNPICTNPPSTST +PNF A IG V
Subjt:  INMFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV

A0A2P5F5B7 Uncharacterized protein5.2e-1468.25Show/hide
Query:  INMFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV
        +NM +  SL L  V +QMAASSS+SPP TGQ  FSTG PNPICTNPPSTST +PNF A IG V
Subjt:  INMFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV

A0A2P5X7L0 Uncharacterized protein2.6e-1365.08Show/hide
Query:  INMFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV
        + M +F SL L  V +Q AASSS+ PP TGQ AFSTG PNPICTNPPSTSTH+P+ +A  GHV
Subjt:  INMFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV

A0A5N5J6X5 Uncharacterized protein2.4e-1162.3Show/hide
Query:  MFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV
        M +  +LIL+VVHKQ AAS+S SP R GQH F+TG P+P CTNPP  ST  P+F+ SIGHV
Subjt:  MFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV

A0A6N2N0E2 Uncharacterized protein5.4e-1160.66Show/hide
Query:  MFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV
        M +  +LIL+VVH+Q AAS+S SP R GQH F+TG P+P CTNPP  ST  P+F+ SIGHV
Subjt:  MFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGGAATAAATATGTTCAAATTCAGCAGCTTAATCCTCAAAGTGGTGCACAAACAAATGGCTGCTTCTAGCTCCAACAGCCCTCCAAGAACTGGGCAACATGCATTTTC
AACTGGATTTCCCAACCCAATATGCACCAATCCTCCAAGCACGTCCACACATAACCCTAATTTCAATGCATCTATAGGGCACGTG
mRNA sequenceShow/hide mRNA sequence
AAAGGAATAAATATGTTCAAATTCAGCAGCTTAATCCTCAAAGTGGTGCACAAACAAATGGCTGCTTCTAGCTCCAACAGCCCTCCAAGAACTGGGCAACATGCATTTTC
AACTGGATTTCCCAACCCAATATGCACCAATCCTCCAAGCACGTCCACACATAACCCTAATTTCAATGCATCTATAGGGCACGTG
Protein sequenceShow/hide protein sequence
KGINMFKFSSLILKVVHKQMAASSSNSPPRTGQHAFSTGFPNPICTNPPSTSTHNPNFNASIGHV