CuGenDBv2

Gene ID	MS012943
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
Genome location	scaffold38:762222..762778
RNA-Seq Expression	MS012943
Synteny	MS012943
Gene Ontology terms	GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domains	IPR038863 - Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0041097.1 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 8 [Cucumis melo var. makuwa]

4.4e-48

82.5

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Query:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MA +L+N GS+ILGG+GVV RSIASSLRLRSGMGLPVGKHIVPDKPL  NDELVWDNGT  PEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPF-VSLLNWTYFADL
        KASKIPF  SL+++  F  +
Subjt:  KASKIPF-VSLLNWTYFADL

KAG7028381.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-51

86.55

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Query:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MA RLSN GS++LGG+GVV RSIASSLRLRSGMGLPVGKHIVPDKPL VNDELVWDNGT  PEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPFVSLLNWTYFADL
        KAS+IPFVSLLN T   DL
Subjt:  KASKIPFVSLLNWTYFADL

XP_022154028.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Momordica charantia]

1.8e-54

99.07

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Query:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MA RLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPF
        KASKIPF
Subjt:  KASKIPF

XP_022965223.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita maxima]

8.9e-49

91.59

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Query:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MA RLSN GSRILGG+GVV RSI SSLR RSGMGLPVGKHIVPDKPL VNDELVWDNGT  PEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPF
        KASKIPF
Subjt:  KASKIPF

XP_038903151.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Benincasa hispida]

4.0e-49

92.52

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Query:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MA RLSN  SRILGG+GVV RSIASSLRLRSGMGLPVGKHIVPDKPL VNDELVWDNGT  PEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPF
        KASKIPF
Subjt:  KASKIPF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5J8 Uncharacterized protein

2.1e-48

89.72

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Query:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MA +L+N GS+ILGG+GVV RSIASSLRLRSGMGLPVGKHIVPDKPL  NDELVWDNGT  PEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPF
        KASKIPF
Subjt:  KASKIPF

A0A5D3CJM3 NADH dehydrogenase (Ubiquinone) 1 beta subcomplex subunit 8

2.1e-48

82.5

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Query:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MA +L+N GS+ILGG+GVV RSIASSLRLRSGMGLPVGKHIVPDKPL  NDELVWDNGT  PEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPF-VSLLNWTYFADL
        KASKIPF  SL+++  F  +
Subjt:  KASKIPF-VSLLNWTYFADL

A0A6J1DJ53 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

8.9e-55

99.07

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Query:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MA RLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPF
        KASKIPF
Subjt:  KASKIPF

A0A6J1E6K0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

2.1e-48

90.65

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Query:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MA RLSN GSRILGG+GVV RSI SSLR RSGMGLPVGKHIVP+KPL VNDELVWDNGT  PEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPF
        KASKIPF
Subjt:  KASKIPF

A0A6J1HN93 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

4.3e-49

91.59

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Query:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MA RLSN GSRILGG+GVV RSI SSLR RSGMGLPVGKHIVPDKPL VNDELVWDNGT  PEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
Subjt:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPF
        KASKIPF
Subjt:  KASKIPF

SwissProt top hits

e value

%identity

Alignment

Q9FGK0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

6.2e-45

80.37

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Query:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MA RLS   SRI+GG+GVV RS+ SSLR R+GMGLPVGKHIVPDKPL VNDEL+WDNGT  PEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV ND
Subjt:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPF
        KASK+PF
Subjt:  KASKIPF

Arabidopsis top hits

e value

%identity

Alignment

AT5G47570.1 unknown protein

4.4e-46

80.37

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Query:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND
        MA RLS   SRI+GG+GVV RS+ SSLR R+GMGLPVGKHIVPDKPL VNDEL+WDNGT  PEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV ND
Subjt:  MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWND

Query:  KASKIPF
        KASK+PF
Subjt:  KASKIPF

Sequences

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CDS sequence

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ATGGCAAGGAGACTCAGCAATTTTGGCTCAAGGATCCTCGGCGGCGATGGCGTTGTTACTCGTTCAATCGCTTCATCTCTCCGACTTCGCTCCGGCATGGGCCTCCCCGT
CGGCAAACACATCGTCCCCGATAAACCCCTTCATGTGAACGACGAACTGGTTTGGGACAATGGGACTAATTTGCCCGAGCCCTGTATTGATCGCATTGCGGATACGGTTG
GGAAGTACGAAGCCCTGGCTTGGTTATGTGGGGGCTTGGGATTTTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAAGCCTCTAAGATACCATTTGTAAGTTTA
CTGAACTGGACTTATTTCGCGGATCTCTTGTGCTCCGTTCTC

mRNA sequence

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Protein sequence

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MARRLSNFGSRILGGDGVVTRSIASSLRLRSGMGLPVGKHIVPDKPLHVNDELVWDNGTNLPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFVSL
LNWTYFADLLCSVL

MS012943 (gene) of Bitter gourd (TR) v1 genome