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MS012955 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012955
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHMA domain-containing protein
Genome locationscaffold38:895312..895473
RNA-Seq ExpressionMS012955
SyntenyMS012955
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55871.1 hypothetical protein Csa_010412 [Cucumis sativus]2.0e-0557.41Show/hide
Query:  AELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQVNGGSLKSISLKLSNHCF
        +EL E+TIDVTK QV+VKGN+K QSK +E  +H    N  SLKS S   SN CF
Subjt:  AELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQVNGGSLKSISLKLSNHCF

XP_022154033.1 uncharacterized protein LOC111021388 isoform X1 [Momordica charantia]3.5e-1894.44Show/hide
Query:  AELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQVNGGSLKSISLKLSNHCF
        +ELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQV GGSLKSISL+LSNHCF
Subjt:  AELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQVNGGSLKSISLKLSNHCF

XP_022154034.1 uncharacterized protein LOC111021388 isoform X2 [Momordica charantia]3.5e-1894.44Show/hide
Query:  AELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQVNGGSLKSISLKLSNHCF
        +ELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQV GGSLKSISL+LSNHCF
Subjt:  AELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQVNGGSLKSISLKLSNHCF

XP_022965235.1 uncharacterized protein LOC111465148 isoform X2 [Cucurbita maxima]3.4e-0559.65Show/hide
Query:  AELIEVTIDVTKNQVVVKGNIKFQSK-KEEINVHYSQVNGGSLKSISL--KLSNHCF
        +EL+E TIDVTK QVVVKGN+KFQ K  EE ++H    N  SLKS SL  + SN CF
Subjt:  AELIEVTIDVTKNQVVVKGNIKFQSK-KEEINVHYSQVNGGSLKSISL--KLSNHCF

XP_023553457.1 uncharacterized protein LOC111810871 [Cucurbita pepo subsp. pepo]2.6e-0561.4Show/hide
Query:  AELIEVTIDVTKNQVVVKGNIKFQSK-KEEINVHYSQVNGGSLKSISL--KLSNHCF
        +EL+E TIDVTK QVVVKGN+KFQ K  EE  VH    N  SLKS SL  + SN+CF
Subjt:  AELIEVTIDVTKNQVVVKGNIKFQSK-KEEINVHYSQVNGGSLKSISL--KLSNHCF

TrEMBL top hitse value%identityAlignment
A0A0A0L6W5 HMA domain-containing protein9.7e-0657.41Show/hide
Query:  AELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQVNGGSLKSISLKLSNHCF
        +EL E+TIDVTK QV+VKGN+K QSK +E  +H    N  SLKS S   SN CF
Subjt:  AELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQVNGGSLKSISLKLSNHCF

A0A6J1DJ58 uncharacterized protein LOC111021388 isoform X11.7e-1894.44Show/hide
Query:  AELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQVNGGSLKSISLKLSNHCF
        +ELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQV GGSLKSISL+LSNHCF
Subjt:  AELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQVNGGSLKSISLKLSNHCF

A0A6J1DKV3 uncharacterized protein LOC111021388 isoform X21.7e-1894.44Show/hide
Query:  AELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQVNGGSLKSISLKLSNHCF
        +ELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQV GGSLKSISL+LSNHCF
Subjt:  AELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQVNGGSLKSISLKLSNHCF

A0A6J1HN60 uncharacterized protein LOC111465148 isoform X21.7e-0559.65Show/hide
Query:  AELIEVTIDVTKNQVVVKGNIKFQSK-KEEINVHYSQVNGGSLKSISL--KLSNHCF
        +EL+E TIDVTK QVVVKGN+KFQ K  EE ++H    N  SLKS SL  + SN CF
Subjt:  AELIEVTIDVTKNQVVVKGNIKFQSK-KEEINVHYSQVNGGSLKSISL--KLSNHCF

A0A6J1HQF9 uncharacterized protein LOC111465148 isoform X11.7e-0559.65Show/hide
Query:  AELIEVTIDVTKNQVVVKGNIKFQSK-KEEINVHYSQVNGGSLKSISL--KLSNHCF
        +EL+E TIDVTK QVVVKGN+KFQ K  EE ++H    N  SLKS SL  + SN CF
Subjt:  AELIEVTIDVTKNQVVVKGNIKFQSK-KEEINVHYSQVNGGSLKSISL--KLSNHCF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAGAATTAATTGAGGTTACCATAGATGTGACAAAAAACCAAGTGGTTGTCAAAGGGAATATCAAGTTTCAAAGCAAGAAAGAAGAAATTAATGTTCATTATTCCCAAGT
GAATGGTGGTTCTCTAAAATCCATCTCTCTCAAACTTTCAAACCATTGCTTT
mRNA sequenceShow/hide mRNA sequence
GCAGAATTAATTGAGGTTACCATAGATGTGACAAAAAACCAAGTGGTTGTCAAAGGGAATATCAAGTTTCAAAGCAAGAAAGAAGAAATTAATGTTCATTATTCCCAAGT
GAATGGTGGTTCTCTAAAATCCATCTCTCTCAAACTTTCAAACCATTGCTTT
Protein sequenceShow/hide protein sequence
AELIEVTIDVTKNQVVVKGNIKFQSKKEEINVHYSQVNGGSLKSISLKLSNHCF