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MS012963 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012963
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin-responsive protein
Genome locationscaffold38:964006..964281
RNA-Seq ExpressionMS012963
SyntenyMS012963
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0050794 - regulation of cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055571.1 auxin-responsive protein IAA33 [Cucumis melo var. makuwa]2.4e-1155.17Show/hide
Query:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
        +ED S V+P V VVLEGRAIC+ +S HKH SY  E   +AL  MFV ++D G E  SGE+RLDL+N+V    V  + ++NDLLLAGD
Subjt:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
XP_008451708.1 PREDICTED: auxin-responsive protein IAA33 [Cucumis melo]2.4e-1155.17Show/hide
Query:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
        +ED S V+P V VVLEGRAIC+ +S HKH SY  E   +AL  MFV ++D G E  SGE+RLDL+N+V    V  + ++NDLLLAGD
Subjt:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
XP_022153356.1 auxin-responsive protein IAA33 [Momordica charantia]9.6e-1661.36Show/hide
Query:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEED-SGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
        +ED S V+P V VVLEGRAIC+ +S HKHASY  E   +AL GMFV E+D  GG+SGSGE+RLDLSN+V    V  + ++NDLLLAGD
Subjt:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEED-SGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
XP_023538318.1 auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo]1.7e-1254.02Show/hide
Query:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
        +ED + V+P V VVLEGRAIC+ +S HKHASY  E   +AL  MFV ++D GG   SGE++LDL+N+V    V  + ++NDLLLAGD
Subjt:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
XP_038890972.1 auxin-responsive protein IAA33 [Benincasa hispida]3.8e-1255.06Show/hide
Query:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESG--SGEQRLDLSNSV---WVLMKTLKNDLLLAGD
        +ED + V+P V VVLEGRAIC+ +S HKHASY  E   +AL  MFV +ED GG  G  SGE++LDL+N+V    V  + ++NDLLLAGD
Subjt:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESG--SGEQRLDLSNSV---WVLMKTLKNDLLLAGD
TrEMBL top hitse value%identityAlignment
A0A1S3BRI6 Auxin-responsive protein1.2e-1155.17Show/hide
Query:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
        +ED S V+P V VVLEGRAIC+ +S HKH SY  E   +AL  MFV ++D G E  SGE+RLDL+N+V    V  + ++NDLLLAGD
Subjt:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
A0A5A7UPU6 Auxin-responsive protein1.2e-1155.17Show/hide
Query:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
        +ED S V+P V VVLEGRAIC+ +S HKH SY  E   +AL  MFV ++D G E  SGE+RLDL+N+V    V  + ++NDLLLAGD
Subjt:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
A0A5D3BTE4 Auxin-responsive protein2.6e-1154.02Show/hide
Query:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
        +ED + V+P V VVLEGRAIC+ +S HKH SY  E   +AL  MFV ++D G E  SGE+RLDL+N+V    V  + ++NDLLLAGD
Subjt:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
A0A6J1DKE3 Auxin-responsive protein4.6e-1661.36Show/hide
Query:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEED-SGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
        +ED S V+P V VVLEGRAIC+ +S HKHASY  E   +AL GMFV E+D  GG+SGSGE+RLDLSN+V    V  + ++NDLLLAGD
Subjt:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEED-SGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
A0A6J1I3D9 Auxin-responsive protein5.9e-1151.09Show/hide
Query:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESG-----SGEQRLDLSNSV---WVLMKTLKNDLLLAGD
        +ED + V+P V VVLEGRAIC+ +S HKHASY  E   +AL  MFV ++D G  SG     SG+++LDL+N+V    V  + ++NDLLLAGD
Subjt:  KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESG-----SGEQRLDLSNSV---WVLMKTLKNDLLLAGD
SwissProt top hitse value%identityAlignment
Q9FKM7 Auxin-responsive protein IAA331.1e-0645.78Show/hide
Query:  SVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
        S VVP V VVLEGR+IC+ +S  KH SY  +    AL  MFV   DS  +       LDLSN++    +  + ++NDLLLAGD
Subjt:  SVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
Arabidopsis top hitse value%identityAlignment
AT5G57420.1 indole-3-acetic acid inducible 337.9e-0845.78Show/hide
Query:  SVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD
        S VVP V VVLEGR+IC+ +S  KH SY  +    AL  MFV   DS  +       LDLSN++    +  + ++NDLLLAGD
Subjt:  SVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSV---WVLMKTLKNDLLLAGD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGAGGATGCATCAGTGGTGGTTCCGCTGGTGATGGTGGTGCTGGAGGGGCGGGCGATCTGCCGCTGGGTCAGCCCCCACAAACATGCAAGCTACGATCGAGAGCCCGG
CAAAGAGGCCCTTGGAGGGATGTTCGTTCAGGAGGAAGACAGCGGCGGAGAGTCCGGCTCCGGCGAGCAGCGTCTTGACCTGTCAAACTCGGTCTGGGTCCTTATGAAGA
CATTGAAAAACGATCTTCTTCTTGCTGGTGACAACCCAAATCAGAAAGAAAAAAAT
mRNA sequenceShow/hide mRNA sequence
AAGGAGGATGCATCAGTGGTGGTTCCGCTGGTGATGGTGGTGCTGGAGGGGCGGGCGATCTGCCGCTGGGTCAGCCCCCACAAACATGCAAGCTACGATCGAGAGCCCGG
CAAAGAGGCCCTTGGAGGGATGTTCGTTCAGGAGGAAGACAGCGGCGGAGAGTCCGGCTCCGGCGAGCAGCGTCTTGACCTGTCAAACTCGGTCTGGGTCCTTATGAAGA
CATTGAAAAACGATCTTCTTCTTGCTGGTGACAACCCAAATCAGAAAGAAAAAAAT
Protein sequenceShow/hide protein sequence
KEDASVVVPLVMVVLEGRAICRWVSPHKHASYDREPGKEALGGMFVQEEDSGGESGSGEQRLDLSNSVWVLMKTLKNDLLLAGDNPNQKEKN