CuGenDBv2

Gene ID	MS012973
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1
Genome location	scaffold38:1051125..1051537
RNA-Seq Expression	MS012973
Synteny	MS012973
Gene Ontology terms	NA
InterPro domains	IPR043459 - NFD6/NOXY2-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004147213.1 uncharacterized protein LOC101221008 isoform X1 [Cucumis sativus]

6.8e-39

91.09

Show/hide

Query:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG
        MASAC RIASRISQSSFR  VRT S AKS SSPFPLPSKSTAPSVRRFSLARSPSELGCV SLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSPG
Subjt:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG

Query:  L
        L
Subjt:  L

XP_008448835.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis melo]

5.7e-38

90.1

Show/hide

Query:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG
        MASAC RIASRISQSSFR  VRT S AKS SS FPLPSKSTAPSVRRFSLARSPSELGCV SLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSPG
Subjt:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG

Query:  L
        L
Subjt:  L

XP_022154046.1 uncharacterized protein LOC111021400 isoform X1 [Momordica charantia]

3.1e-44

98.02

Show/hide

Query:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG
        MASACHRIASRISQSSFRAAVRTQSP KSPSSPFPLPSKSTAPSVRRFSLARSPSELGCV SLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG
Subjt:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG

Query:  L
        L
Subjt:  L

XP_022154047.1 uncharacterized protein LOC111021400 isoform X2 [Momordica charantia]

7.5e-38

97.8

Show/hide

Query:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACHRIASRISQSSFRAAVRTQSP KSPSSPFPLPSKSTAPSVRRFSLARSPSELGCV SLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQ

XP_038903086.1 protein NONRESPONDING TO OXYLIPINS 2, mitochondrial isoform X1 [Benincasa hispida]

5.7e-38

88.12

Show/hide

Query:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG
        MASAC RIASRISQSSFR  VRT + AKS SSPFPLP+KSTAPSVRRFSLARSPSELGC+ SLLPFHNAVAGARMISCLSTNSRSCRALSQG LCCT PG
Subjt:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG

Query:  L
        L
Subjt:  L

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BKM3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1

2.8e-38

90.1

Show/hide

Query:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG
        MASAC RIASRISQSSFR  VRT S AKS SS FPLPSKSTAPSVRRFSLARSPSELGCV SLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSPG
Subjt:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG

Query:  L
        L
Subjt:  L

A0A6J1DJ71 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3

3.6e-38

94.68

Show/hide

Query:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTL
        MASACHRIASRISQSSFRAAVRTQSP KSPSSPFPLPSKSTAPSVRRFSLARSPSELGCV SLLPFHNAVAGARMISCLSTNSRSCRALSQ  +
Subjt:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTL

A0A6J1DKL6 uncharacterized protein LOC111021400 isoform X2

3.6e-38

97.8

Show/hide

Query:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACHRIASRISQSSFRAAVRTQSP KSPSSPFPLPSKSTAPSVRRFSLARSPSELGCV SLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQ

A0A6J1DMJ3 uncharacterized protein LOC111021400 isoform X1

1.5e-44

98.02

Show/hide

Query:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG
        MASACHRIASRISQSSFRAAVRTQSP KSPSSPFPLPSKSTAPSVRRFSLARSPSELGCV SLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG
Subjt:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG

Query:  L
        L
Subjt:  L

A0A6J1EAY8 uncharacterized protein LOC111430946 isoform X1

3.4e-36

85.15

Show/hide

Query:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG
        MASAC RIASRISQSS R  VRT SP K+ SSPF LP   TAPSVRRFSLAR+PSELGCV SLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSP 
Subjt:  MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPG

Query:  L
        L
Subjt:  L

SwissProt top hits

e value

%identity

Alignment

Q6NNL9 Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial

1.0e-05

41.18

Show/hide

Query:  MASACHRIASRISQSSFRAAVRTQS-PAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSP
        MAS C R  S+ + S+FR+A+   S   KS SS   +P     PS      +R   +LG + SLLP ++AVA AR+ SCL  +S++ R+L+QG LC  +P
Subjt:  MASACHRIASRISQSSFRAAVRTQS-PAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSP

Query:  GL
        G+
Subjt:  GL

Arabidopsis top hits

e value

%identity

Alignment

AT4G17310.1 unknown protein

1.0e-21

58.25

Show/hide

Query:  MASACHRIASRISQSSFRAAVR--TQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTS
        MASAC ++ +R S SS ++ +R  T S + + S+ F LPS+ T    R FS +R PSELGCV SLLP H+ VA AR+ SCLST SRS RALSQGTLCCTS
Subjt:  MASACHRIASRISQSSFRAAVR--TQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTS

Query:  PGL
        P L
Subjt:  PGL

AT5G47455.1 unknown protein

1.2e-17

53.61

Show/hide

Query:  RIASRISQSSFRAAVRT----------QSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        R  SR S SSF++A+R+           SPA + S+ F +PSK  A  + RFS +R PSELGCV SLLP H+ VA AR+ SCLST SRS RAL+QGT
Subjt:  RIASRISQSSFRAAVRT----------QSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

AT5G47455.5 unknown protein

2.3e-16

52.63

Show/hide

Query:  RIASRISQSSFRAAVRT----------QSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        R  SR S SSF++A+R+           SPA + S+ F +PSK  A  + RFS +R PSELGCV SLLP H+ VA AR+ SCLST SRS RAL+Q
Subjt:  RIASRISQSSFRAAVRT----------QSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQ

AT5G47455.6 unknown protein

1.2e-17

53.61

Show/hide

Query:  RIASRISQSSFRAAVRT----------QSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        R  SR S SSF++A+R+           SPA + S+ F +PSK  A  + RFS +R PSELGCV SLLP H+ VA AR+ SCLST SRS RAL+QGT
Subjt:  RIASRISQSSFRAAVRT----------QSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

AT5G47455.7 unknown protein

1.2e-17

53.61

Show/hide

Query:  RIASRISQSSFRAAVRT----------QSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        R  SR S SSF++A+R+           SPA + S+ F +PSK  A  + RFS +R PSELGCV SLLP H+ VA AR+ SCLST SRS RAL+QGT
Subjt:  RIASRISQSSFRAAVRT----------QSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCGCTTGCCACAGAATTGCGAGCAGGATCTCTCAATCCTCCTTCAGAGCAGCCGTCCGTACACAGTCTCCGGCCAAATCTCCATCTTCTCCGTTCCCTCTACC
TTCTAAATCCACTGCACCTTCAGTTCGCCGGTTCTCGCTCGCCAGGTCTCCGTCGGAGCTGGGATGCGTGCATTCTCTATTGCCGTTTCACAACGCGGTTGCTGGAGCGA
GAATGATTTCGTGTCTGAGCACCAATTCGAGGAGTTGCCGTGCGCTTTCTCAGGGTACTCTCTGCTGCACCTCTCCCGGCCTC

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MASACHRIASRISQSSFRAAVRTQSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVHSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPGL

MS012973 (gene) of Bitter gourd (TR) v1 genome