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MS012979 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012979
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold38:1145311..1145785
RNA-Seq ExpressionMS012979
SyntenyMS012979
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55852.1 hypothetical protein Csa_011630 [Cucumis sativus]2.1e-1952.14Show/hide
Query:  MKQYKISNTFPFNKTGMEQIELPKRELLRTSFAEIPLILVRLNRRSNSRIPLIEEPVEIHKLLKGNKQTPQSPHRCKHQVFS-------PIRKNPTESE-
        MKQYK SNT PFNKTG+EQIELPKR LL+TSFAEIP+IL+     +   IPLIE+ V+     KG+KQ P +P +   Q  +        + KN TESE 
Subjt:  MKQYKISNTFPFNKTGMEQIELPKRELLRTSFAEIPLILVRLNRRSNSRIPLIEEPVEIHKLLKGNKQTPQSPHRCKHQVFS-------PIRKNPTESE-

Query:  -ILSSEEPRRREIRSSKQHHPSGTHPISGKQSRSEKPTGG
         I      RRREIRSSKQHH       S +QSRS KP  G
Subjt:  -ILSSEEPRRREIRSSKQHHPSGTHPISGKQSRSEKPTGG
TrEMBL top hitse value%identityAlignment
A0A0A0L5H0 Uncharacterized protein9.9e-2052.14Show/hide
Query:  MKQYKISNTFPFNKTGMEQIELPKRELLRTSFAEIPLILVRLNRRSNSRIPLIEEPVEIHKLLKGNKQTPQSPHRCKHQVFS-------PIRKNPTESE-
        MKQYK SNT PFNKTG+EQIELPKR LL+TSFAEIP+IL+     +   IPLIE+ V+     KG+KQ P +P +   Q  +        + KN TESE 
Subjt:  MKQYKISNTFPFNKTGMEQIELPKRELLRTSFAEIPLILVRLNRRSNSRIPLIEEPVEIHKLLKGNKQTPQSPHRCKHQVFS-------PIRKNPTESE-

Query:  -ILSSEEPRRREIRSSKQHHPSGTHPISGKQSRSEKPTGG
         I      RRREIRSSKQHH       S +QSRS KP  G
Subjt:  -ILSSEEPRRREIRSSKQHHPSGTHPISGKQSRSEKPTGG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAATACAAAATATCAAACACTTTTCCCTTCAACAAAACCGGGATGGAACAAATCGAACTGCCGAAAAGAGAGCTTCTACGAACTTCGTTCGCTGAAATTCCCCT
TATTCTCGTCCGACTAAATCGCAGGAGCAATAGTAGGATCCCCTTGATCGAAGAGCCCGTCGAGATACACAAATTACTCAAGGGAAATAAACAAACCCCTCAAAGCCCCC
ACCGATGCAAGCACCAAGTCTTCAGCCCGATCAGAAAAAACCCAACAGAGTCAGAAATCTTATCTTCAGAAGAACCGCGACGGCGAGAGATCAGATCCTCAAAGCAGCAC
CACCCATCAGGGACACACCCTATCTCCGGAAAGCAATCAAGATCCGAGAAACCCACTGGCGGGAGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACAATACAAAATATCAAACACTTTTCCCTTCAACAAAACCGGGATGGAACAAATCGAACTGCCGAAAAGAGAGCTTCTACGAACTTCGTTCGCTGAAATTCCCCT
TATTCTCGTCCGACTAAATCGCAGGAGCAATAGTAGGATCCCCTTGATCGAAGAGCCCGTCGAGATACACAAATTACTCAAGGGAAATAAACAAACCCCTCAAAGCCCCC
ACCGATGCAAGCACCAAGTCTTCAGCCCGATCAGAAAAAACCCAACAGAGTCAGAAATCTTATCTTCAGAAGAACCGCGACGGCGAGAGATCAGATCCTCAAAGCAGCAC
CACCCATCAGGGACACACCCTATCTCCGGAAAGCAATCAAGATCCGAGAAACCCACTGGCGGGAGA
Protein sequenceShow/hide protein sequence
MKQYKISNTFPFNKTGMEQIELPKRELLRTSFAEIPLILVRLNRRSNSRIPLIEEPVEIHKLLKGNKQTPQSPHRCKHQVFSPIRKNPTESEILSSEEPRRREIRSSKQH
HPSGTHPISGKQSRSEKPTGGR