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MS012983 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012983
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTranscription factor DREB1
Genome locationscaffold38:1181275..1181550
RNA-Seq ExpressionMS012983
SyntenyMS012983
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0015020 - glucuronosyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACN31061.1 unknown [Zea mays]1.1e-1672.06Show/hide
Query:  LRKAARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTFL
        LR AARPL+  AATSWA AAIS V NVPS +RDF  GS ISDTH PH RIRTPR VGC PSLP   FL
Subjt:  LRKAARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTFL

BAS98207.1 Os06g0553550 [Oryza sativa Japonica Group]2.1e-1568.57Show/hide
Query:  LRKAARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTFLEP
        L  AA PL   AA S A AAISGV NVPSQ+RDF  GSLISDTHFPH RIRTPRYVGCLP  P      P
Subjt:  LRKAARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTFLEP

CAN76868.1 hypothetical protein VITISV_012310 [Vitis vinifera]3.4e-1357.3Show/hide
Query:  LRKAARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTFLEPLMISLLQFLISEEEEEDEE
        LR A  PL+++AATSWA AAISGVE VPS IRDF  GS ISDTH P  RIRTP Y GCL        L  L +    F I +E+ EDEE
Subjt:  LRKAARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTFLEPLMISLLQFLISEEEEEDEE

KAB8086574.1 hypothetical protein EE612_009938, partial [Oryza sativa]1.9e-1670.15Show/hide
Query:  AARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTFLEP
        A  PL   AA SWA AAISGV NVPSQ+RDFF GSLISDTHFPH RIRTPRY GCLP  P      P
Subjt:  AARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTFLEP

XP_024317198.1 uncharacterized protein LOC112271682 [Brachypodium distachyon]1.6e-1571.43Show/hide
Query:  ARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTF
        A PL+  AA SWA AA+S V  VPSQ+RDFF GS ISDTHFPH RIRTPRYVGC PSL  F F
Subjt:  ARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTF

TrEMBL top hitse value%identityAlignment
A0A0E0EGR0 Uncharacterized protein5.0e-1875.38Show/hide
Query:  LRKAARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSF
        LR AARPL+  AATSWA AA+S V NVPSQ+RDFF GS ISDTHFPH RIRTPRY GC PSL  F
Subjt:  LRKAARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSF

A0A0N7KEZ3 Os02g0230875 protein (Fragment)9.4e-1770.15Show/hide
Query:  AARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTFLEP
        A  PL   AA SWA AAISGV NVPSQ+RDFF GSLISDTHFPH RIRTPRY GCLP  P      P
Subjt:  AARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTFLEP

A0A0P0WXR1 Os06g0553550 protein1.0e-1568.57Show/hide
Query:  LRKAARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTFLEP
        L  AA PL   AA S A AAISGV NVPSQ+RDF  GSLISDTHFPH RIRTPRYVGCLP  P      P
Subjt:  LRKAARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTFLEP

A0A7C9CP05 Uncharacterized protein6.7e-1569.12Show/hide
Query:  LRKAARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGC-LPSLPSFTF
        LR A  PL++ AATSWA AAISG   VPS IRDFF GS ISDTHFPH  IRTPRY GC L SL  F F
Subjt:  LRKAARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGC-LPSLPSFTF

C0PA66 Uncharacterized protein5.5e-1772.06Show/hide
Query:  LRKAARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTFL
        LR AARPL+  AATSWA AAIS V NVPS +RDF  GS ISDTH PH RIRTPR VGC PSLP   FL
Subjt:  LRKAARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGAGGAAGGCGGCGCGGCCTTTGATTGTCCGGGCGGCGACGTCGTGGGCTCTGGCCGCCATTTCCGGCGTGGAGAATGTGCCCAGCCAAATCCGCGATTTCTTCTTTGG
TTCTCTGATTTCGGACACCCATTTTCCCCATTGTCGCATTCGGACGCCGCGATATGTGGGATGCTTGCCGTCGCTCCCGAGTTTCACCTTTTTGGAGCCCTTGATGATTT
CTTTGCTGCAATTTTTGATCTCAGAAGAAGAAGAAGAAGATGAAGAAGAAGAAGAT
mRNA sequenceShow/hide mRNA sequence
TTGAGGAAGGCGGCGCGGCCTTTGATTGTCCGGGCGGCGACGTCGTGGGCTCTGGCCGCCATTTCCGGCGTGGAGAATGTGCCCAGCCAAATCCGCGATTTCTTCTTTGG
TTCTCTGATTTCGGACACCCATTTTCCCCATTGTCGCATTCGGACGCCGCGATATGTGGGATGCTTGCCGTCGCTCCCGAGTTTCACCTTTTTGGAGCCCTTGATGATTT
CTTTGCTGCAATTTTTGATCTCAGAAGAAGAAGAAGAAGATGAAGAAGAAGAAGAT
Protein sequenceShow/hide protein sequence
LRKAARPLIVRAATSWALAAISGVENVPSQIRDFFFGSLISDTHFPHCRIRTPRYVGCLPSLPSFTFLEPLMISLLQFLISEEEEEDEEEED