CuGenDBv2

Gene ID	MS013000
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Phosphatase 2C (PP2C)-like protein
Genome location	scaffold38:1375180..1379093
RNA-Seq Expression	MS013000
Synteny	MS013000
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0016788 - hydrolase activity, acting on ester bonds (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6582163.1 hypothetical protein SDJN03_22165, partial [Cucurbita argyrosperma subsp. sororia]

6.8e-40

76.72

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Query:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE
        L E L+ASFPSHRPS LETGE  D+EHHIV NAFSAGQ ELIALEKALK+ MIPA TARETDFGREVPLFE+E TTVE    +LYSYIFDTDN+ Y+A E
Subjt:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE

Query:  MDRLIPIAIFMVKFDK
         DRL+PIAIF+V FDK
Subjt:  MDRLIPIAIFMVKFDK

KAG7018564.1 hypothetical protein SDJN02_20434, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.8e-40

76.72

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Query:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE
        L E L+ASFPSHRPS LETGE  D+EHHIV NAFSAGQ ELIALEKALK+ MIPA TARETDFGREVPLFE+E TTVE    +LYSYIFDTDN+ Y+A E
Subjt:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE

Query:  MDRLIPIAIFMVKFDK
         DRL+PIAIF+V FDK
Subjt:  MDRLIPIAIFMVKFDK

XP_022137937.1 uncharacterized protein LOC111009230 [Momordica charantia]

2.1e-41

76.72

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Query:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE
        L E L+ASFPSHRPS LETG+L D+EHHIV N FSAGQ ELIALE+ALK+ M+PAGTARETDFGREVPLFE+E T VE     LYSYIFDTDN GYSATE
Subjt:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE

Query:  MDRLIPIAIFMVKFDK
        MDRL+PI+IF+V FDK
Subjt:  MDRLIPIAIFMVKFDK

XP_023527840.1 uncharacterized protein LOC111790941 [Cucurbita pepo subsp. pepo]

6.8e-40

76.72

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Query:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE
        L E L+ASFPSHRPS LETGE  D+EHHIV NAFSAGQ ELIALEKALK+ MIPA TARETDFGREVPLFE+E TTVE    +LYSYIFDTDN+ Y+A E
Subjt:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE

Query:  MDRLIPIAIFMVKFDK
         DRL+PIAIF+V FDK
Subjt:  MDRLIPIAIFMVKFDK

XP_038906478.1 uncharacterized protein LOC120092459 [Benincasa hispida]

2.3e-40

76.72

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Query:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE
        L E L+ASFPSHRPS LETGE  D+EHHIV NAFS GQ ELIALEKALK+TMIPAGTARETDFGREVPLFE+E T VE    +LYSYIFDTDN+ YSA +
Subjt:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE

Query:  MDRLIPIAIFMVKFDK
         DRL+PIAIF+V FDK
Subjt:  MDRLIPIAIFMVKFDK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U1B2 Phosphatase 2C (PP2C)-like protein

2.8e-39

75.86

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Query:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE
        L E L+ASFPSHRPS LETGE  D+EHH+V NAF+ GQ ELIALEKALK+TMIPAGTARETDFGREVPLFE+E TTVE    +LYSYIFD DN+GYSA E
Subjt:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE

Query:  MDRLIPIAIFMVKFDK
         DR++PIAIF+V FDK
Subjt:  MDRLIPIAIFMVKFDK

A0A5D3D194 Phosphatase 2C (PP2C)-like protein

2.8e-39

75.86

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Query:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE
        L E L+ASFPSHRPS LETGE  D+EHH+V NAF+ GQ ELIALEKALK+TMIPAGTARETDFGREVPLFE+E TTVE    +LYSYIFD DN+GYSA E
Subjt:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE

Query:  MDRLIPIAIFMVKFDK
         DR++PIAIF+V FDK
Subjt:  MDRLIPIAIFMVKFDK

A0A6J1C9N7 uncharacterized protein LOC111009230

1.0e-41

76.72

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Query:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE
        L E L+ASFPSHRPS LETG+L D+EHHIV N FSAGQ ELIALE+ALK+ M+PAGTARETDFGREVPLFE+E T VE     LYSYIFDTDN GYSATE
Subjt:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE

Query:  MDRLIPIAIFMVKFDK
        MDRL+PI+IF+V FDK
Subjt:  MDRLIPIAIFMVKFDK

A0A6J1GU08 uncharacterized protein LOC111457479

3.3e-40

76.72

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Query:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE
        L E L+ASFPSHRPS LETGE  D+EHHIV NAFSAGQ ELIALEKALK+ MIPA TARETDFGREVPLFE+E TTVE    +LYSYIFDTDN+ Y+A E
Subjt:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE

Query:  MDRLIPIAIFMVKFDK
         DRL+PIAIF+V FDK
Subjt:  MDRLIPIAIFMVKFDK

A0A6J1IXC5 uncharacterized protein LOC111479343

1.3e-39

75.86

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Query:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE
        L E L+ASFPSHRPS LETGE  D+EHHIV NAFSAGQ ELIALEKALK+ MIP GTARETDFGR VPLFE+E TTVE    +LYSYIFDTDN+ Y+A E
Subjt:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE

Query:  MDRLIPIAIFMVKFDK
         DRL+PIAIF+V FDK
Subjt:  MDRLIPIAIFMVKFDK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G16180.1 unknown protein

6.8e-30

56.9

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Query:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE
        L E L+ASF +HRPS  ETGE  D+EH +V N F +GQ ELIALEKA+K+ M+PAGTA E DFGR +P +++E   VE    +LYSYIFD D    SA  
Subjt:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE

Query:  MDRLIPIAIFMVKFDK
         D+ IP AIF+V FDK
Subjt:  MDRLIPIAIFMVKFDK

AT4G16180.2 unknown protein

6.8e-30

56.9

Show/hide

Query:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE
        L E L+ASF +HRPS  ETGE  D+EH +V N F +GQ ELIALEKA+K+ M+PAGTA E DFGR +P +++E   VE    +LYSYIFD D    SA  
Subjt:  LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVE----ELYSYIFDTDNQGYSATE

Query:  MDRLIPIAIFMVKFDK
         D+ IP AIF+V FDK
Subjt:  MDRLIPIAIFMVKFDK

Sequences

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CDS sequence

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CTATCAGAGTTGCTGAAAGCCAGCTTTCCTTCTCACAGGCCATCCTCCCTTGAGACAGGTGAGCTCAATGACATGGAACATCATATTGTATCCAATGCATTTTCTGCAGG
TCAGGATGAATTGATAGCTCTCGAGAAGGCACTAAAGGATACCATGATTCCTGCTGGAACTGCAAGAGAGACTGATTTTGGCAGGGAGGTACCTTTGTTTGAGTTAGAAG
GAACAACAGTTGAAGAATTATATTCCTATATATTTGACACAGATAATCAGGGGTACTCTGCTACTGAGATGGATAGGCTTATCCCAATTGCCATATTTATGGTCAAATTT
GATAAG

mRNA sequence

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Protein sequence

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LSELLKASFPSHRPSSLETGELNDMEHHIVSNAFSAGQDELIALEKALKDTMIPAGTARETDFGREVPLFELEGTTVEELYSYIFDTDNQGYSATEMDRLIPIAIFMVKF
DK

MS013000 (gene) of Bitter gourd (TR) v1 genome