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MS013013 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013013
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description4-coumarate--CoA ligase
Genome locationscaffold344:160581..160694
RNA-Seq ExpressionMS013013
SyntenyMS013013
Gene Ontology termsGO:0009698 - phenylpropanoid metabolic process (biological process)
GO:0008922 - long-chain fatty acid [acyl-carrier-protein] ligase activity (molecular function)
GO:0016207 - 4-coumarate-CoA ligase activity (molecular function)
InterPro domainsIPR000873 - AMP-dependent synthetase/ligase
IPR042099 - ANL, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013777.1 putative acyl-activating enzyme 16, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.6e-0986.84Show/hide
Query:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        Y YEAISLDDIATL+YTS T GNPKGVMLTHRNLLHQ+
Subjt:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV

XP_022958898.1 probable acyl-activating enzyme 16, chloroplastic isoform X1 [Cucurbita moschata]1.6e-0986.84Show/hide
Query:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        Y YEAISLDDIATL+YTS T GNPKGVMLTHRNLLHQ+
Subjt:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV

XP_023006517.1 probable acyl-activating enzyme 16, chloroplastic isoform X1 [Cucurbita maxima]1.6e-0986.84Show/hide
Query:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        Y YEAISLDDIATL+YTS T GNPKGVMLTHRNLLHQ+
Subjt:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV

XP_023548745.1 probable acyl-activating enzyme 16, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]1.6e-0986.84Show/hide
Query:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        Y YEAISLDDIATL+YTS T GNPKGVMLTHRNLLHQ+
Subjt:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV

XP_038874366.1 probable acyl-activating enzyme 16, chloroplastic [Benincasa hispida]1.6e-0986.84Show/hide
Query:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        Y YEAISLDDIATL+YTS T GNPKGVMLTHRNLLHQ+
Subjt:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV

TrEMBL top hitse value%identityAlignment
A0A6J1D1M2 probable acyl-activating enzyme 16, chloroplastic1.3e-0984.21Show/hide
Query:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        YIYEAIS DD+ATL+YTS T GNPKGVMLTHRNLLHQ+
Subjt:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV

A0A6J1H4D5 probable acyl-activating enzyme 16, chloroplastic isoform X17.8e-1086.84Show/hide
Query:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        Y YEAISLDDIATL+YTS T GNPKGVMLTHRNLLHQ+
Subjt:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV

A0A6J1H6F8 probable acyl-activating enzyme 16, chloroplastic isoform X27.8e-1086.84Show/hide
Query:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        Y YEAISLDDIATL+YTS T GNPKGVMLTHRNLLHQ+
Subjt:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV

A0A6J1KW26 probable acyl-activating enzyme 16, chloroplastic isoform X17.8e-1086.84Show/hide
Query:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        Y YEAISLDDIATL+YTS T GNPKGVMLTHRNLLHQ+
Subjt:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV

A0A6J1L552 probable acyl-activating enzyme 16, chloroplastic isoform X27.8e-1086.84Show/hide
Query:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        Y YEAISLDDIATL+YTS T GNPKGVMLTHRNLLHQ+
Subjt:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV

SwissProt top hitse value%identityAlignment
P9WQ52 Putative fatty-acid--CoA ligase fadD117.3e-0557.14Show/hide
Query:  YEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQ
        + A+  +DI TL+YTS T GNPKGV +TH NLL +
Subjt:  YEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQ

P9WQ53 Putative fatty-acid--CoA ligase fadD117.3e-0557.14Show/hide
Query:  YEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQ
        + A+  +DI TL+YTS T GNPKGV +TH NLL +
Subjt:  YEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQ

Q55DR6 Fatty acyl-CoA synthetase A2.5e-0558.33Show/hide
Query:  YEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        +E  S +D+ TLLYTS + GNPKGVMLTH N++ +V
Subjt:  YEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV

Q8W471 Long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic1.2e-0765.79Show/hide
Query:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        Y  + I  DD A ++YTS T GNPKGVMLTHRNLLHQ+
Subjt:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV

Q9LK39 Probable acyl-activating enzyme 16, chloroplastic1.3e-0973.68Show/hide
Query:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        Y YE I  DDIAT++YTS T GNPKGVMLTH+NLLHQ+
Subjt:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV

Arabidopsis top hitse value%identityAlignment
AT1G20480.1 AMP-dependent synthetase and ligase family protein1.3e-0452.94Show/hide
Query:  IYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLL
        + + ++ DD A LLY+S T G  KGVML+HRNL+
Subjt:  IYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLL

AT3G05970.1 long-chain acyl-CoA synthetase 62.6e-0563.33Show/hide
Query:  DDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        DD+AT+ YTS T G PKGV+LTH NL+  V
Subjt:  DDIATLLYTSRTNGNPKGVMLTHRNLLHQV

AT3G23790.1 AMP-dependent synthetase and ligase family protein9.1e-1173.68Show/hide
Query:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        Y YE I  DDIAT++YTS T GNPKGVMLTH+NLLHQ+
Subjt:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV

AT4G14070.1 acyl-activating enzyme 158.5e-0965.79Show/hide
Query:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        Y  + I  DD A ++YTS T GNPKGVMLTHRNLLHQ+
Subjt:  YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV

AT5G27600.1 long-chain acyl-CoA synthetase 77.5e-0563.33Show/hide
Query:  DDIATLLYTSRTNGNPKGVMLTHRNLLHQV
        +DIAT+ YTS T G PKGV+LTH NL+  V
Subjt:  DDIATLLYTSRTNGNPKGVMLTHRNLLHQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATATATATGAAGCTATAAGCTTGGATGATATTGCCACACTTTTGTATACAAGCAGGACAAATGGAAACCCTAAAGGTGTCATGCTTACTCATCGGAATTTATTGCACCA
GGTT
mRNA sequenceShow/hide mRNA sequence
TATATATATGAAGCTATAAGCTTGGATGATATTGCCACACTTTTGTATACAAGCAGGACAAATGGAAACCCTAAAGGTGTCATGCTTACTCATCGGAATTTATTGCACCA
GGTT
Protein sequenceShow/hide protein sequence
YIYEAISLDDIATLLYTSRTNGNPKGVMLTHRNLLHQV