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MS013020 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013020
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTF-B3 domain-containing protein
Genome locationscaffold344:292330..292494
RNA-Seq ExpressionMS013020
SyntenyMS013020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038883715.1 uncharacterized protein LOC120074618 isoform X1 [Benincasa hispida]5.4e-0645.45Show/hide
Query:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ
        +L  HL+RRQC  T+ + + FN EG +  F + EF  I GLNCG+L  +D  K Q
Subjt:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ

XP_038883716.1 uncharacterized protein LOC120074618 isoform X2 [Benincasa hispida]5.4e-0645.45Show/hide
Query:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ
        +L  HL+RRQC  T+ + + FN EG +  F + EF  I GLNCG+L  +D  K Q
Subjt:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ

XP_038883717.1 uncharacterized protein LOC120074618 isoform X3 [Benincasa hispida]5.4e-0645.45Show/hide
Query:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ
        +L  HL+RRQC  T+ + + FN EG +  F + EF  I GLNCG+L  +D  K Q
Subjt:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ

XP_038883718.1 uncharacterized protein LOC120074618 isoform X4 [Benincasa hispida]5.4e-0645.45Show/hide
Query:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ
        +L  HL+RRQC  T+ + + FN EG +  F + EF  I GLNCG+L  +D  K Q
Subjt:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ

XP_038883719.1 uncharacterized protein LOC120074618 isoform X5 [Benincasa hispida]5.4e-0645.45Show/hide
Query:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ
        +L  HL+RRQC  T+ + + FN EG +  F + EF  I GLNCG+L  +D  K Q
Subjt:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ

TrEMBL top hitse value%identityAlignment
A0A0A0KI50 TF-B3 domain-containing protein7.6e-0645.45Show/hide
Query:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ
        +L  HLIRRQC   + + + FN EG +  F + +F  I GLNCG+L A+D  K Q
Subjt:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ

A0A1S3B0L9 uncharacterized protein LOC103484737 isoform X51.3e-0545.45Show/hide
Query:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ
        +L  HLIRRQC   +   + FN EG +  F + +F  I GLNCG+L A+D  K Q
Subjt:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ

A0A1S3B181 uncharacterized protein LOC103484737 isoform X71.3e-0545.45Show/hide
Query:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ
        +L  HLIRRQC   +   + FN EG +  F + +F  I GLNCG+L A+D  K Q
Subjt:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ

A0A5D3CNI7 TF-B3 domain-containing protein1.3e-0545.45Show/hide
Query:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ
        +L  HLIRRQC   +   + FN EG +  F + +F  I GLNCG+L A+D  K Q
Subjt:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ

A0A6J1BX50 uncharacterized protein LOC1110055243.4e-0647.27Show/hide
Query:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ
        +L  HLIRRQCS  + + + FN EG V  F I +F  I G+NCG+L  +D  K Q
Subjt:  ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAATTACTTTGCCATTTGATTAGGAGACAATGTAGTCCGACGTCTGGGGATGGGATTGGTTTTAACTTTGAGGGAGAGGTAGTATACTTTGAAATAGTAGAATTTAAATG
TATTATTGGACTTAATTGTGGCAAACTTTCTGCAGTAGACTTCAAAAAAACTCAA
mRNA sequenceShow/hide mRNA sequence
GAATTACTTTGCCATTTGATTAGGAGACAATGTAGTCCGACGTCTGGGGATGGGATTGGTTTTAACTTTGAGGGAGAGGTAGTATACTTTGAAATAGTAGAATTTAAATG
TATTATTGGACTTAATTGTGGCAAACTTTCTGCAGTAGACTTCAAAAAAACTCAA
Protein sequenceShow/hide protein sequence
ELLCHLIRRQCSPTSGDGIGFNFEGEVVYFEIVEFKCIIGLNCGKLSAVDFKKTQ