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MS013049 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013049
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionouter envelope pore protein 16, chloroplastic
Genome locationscaffold997:10040..12179
RNA-Seq ExpressionMS013049
SyntenyMS013049
Gene Ontology termsGO:0003333 - amino acid transmembrane transport (biological process)
GO:0006811 - ion transport (biological process)
GO:0045037 - protein import into chloroplast stroma (biological process)
GO:0009707 - chloroplast outer membrane (cellular component)
GO:0034426 - etioplast membrane (cellular component)
GO:0046930 - pore complex (cellular component)
GO:0015171 - amino acid transmembrane transporter activity (molecular function)
GO:0015288 - porin activity (molecular function)
GO:0042803 - protein homodimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8023298.1 hypothetical protein FH972_009013 [Carpinus fangiana]2.8e-5481.34Show/hide
Query:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA
        PK+DV IDMGNPFLNLTVD F KIG+VAATRA AEDAYH ++KG I        LKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGA+TGA
Subjt:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA

Query:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT
        LVSAAS+NN+DK+ +DAITGGA+ATAAEFLNYLT
Subjt:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT

XP_008457483.1 PREDICTED: outer envelope pore protein 16, chloroplastic [Cucumis melo]1.9e-5584.33Show/hide
Query:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA
        PK+DVVIDMGNPFLNLTVD F KIGSVAATRAAAEDAYHV+RKG I      + LKKMC EGAYWG VAG YVGMEYGVER+RGTRDWKNAMIGGALTGA
Subjt:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA

Query:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT
        LVSAAS+NNRDK+ IDAITGGAVATAAEF+NYLT
Subjt:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT

XP_022158248.1 outer envelope pore protein 16, chloroplastic [Momordica charantia]1.5e-6093.33Show/hide
Query:  MPKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTG
        MPKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKG I        LKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTG
Subjt:  MPKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTG

Query:  ALVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT
        ALVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT
Subjt:  ALVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT

XP_022964801.1 outer envelope pore protein 16, chloroplastic [Cucurbita moschata]8.7e-5685.82Show/hide
Query:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA
        PK+DVVIDMGNPFLNLTVD F KIGSVAATRAAAEDAYHV+RKG I      + LKKMCKEGAYWGTVAGVYVGMEYGVERIRG RDWKNAMIGGALTGA
Subjt:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA

Query:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT
        +VSAAS++NRDKI IDAITGGAVATAAEF+NYLT
Subjt:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT

XP_038893818.1 outer envelope pore protein 16, chloroplastic [Benincasa hispida]2.7e-5787.31Show/hide
Query:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA
        PK+DVVIDMGNPFLNLTVD F KIGSVAATRAAAEDAYHV+RKG I      + LKKMCKEGAYWGTVAGVYVGMEYGVER+RGTRDWKNAMIGGALTGA
Subjt:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA

Query:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT
        LVSAAS+NNRDKI IDAITGGAVATAAEF+NYLT
Subjt:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT

TrEMBL top hitse value%identityAlignment
A0A1S3C572 outer envelope pore protein 16, chloroplastic9.4e-5684.33Show/hide
Query:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA
        PK+DVVIDMGNPFLNLTVD F KIGSVAATRAAAEDAYHV+RKG I      + LKKMC EGAYWG VAG YVGMEYGVER+RGTRDWKNAMIGGALTGA
Subjt:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA

Query:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT
        LVSAAS+NNRDK+ IDAITGGAVATAAEF+NYLT
Subjt:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT

A0A5D3BDN0 Outer envelope pore protein 169.4e-5684.33Show/hide
Query:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA
        PK+DVVIDMGNPFLNLTVD F KIGSVAATRAAAEDAYHV+RKG I      + LKKMC EGAYWG VAG YVGMEYGVER+RGTRDWKNAMIGGALTGA
Subjt:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA

Query:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT
        LVSAAS+NNRDK+ IDAITGGAVATAAEF+NYLT
Subjt:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT

A0A6J1DVJ9 outer envelope pore protein 16, chloroplastic7.4e-6193.33Show/hide
Query:  MPKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTG
        MPKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKG I        LKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTG
Subjt:  MPKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTG

Query:  ALVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT
        ALVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT
Subjt:  ALVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT

A0A6J1HJY9 outer envelope pore protein 16, chloroplastic4.2e-5685.82Show/hide
Query:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA
        PK+DVVIDMGNPFLNLTVD F KIGSVAATRAAAEDAYHV+RKG I      + LKKMCKEGAYWGTVAGVYVGMEYGVERIRG RDWKNAMIGGALTGA
Subjt:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA

Query:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT
        +VSAAS++NRDKI IDAITGGAVATAAEF+NYLT
Subjt:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT

A0A6J1HZI5 outer envelope pore protein 16, chloroplastic4.2e-5685.82Show/hide
Query:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA
        PK+DVVIDMGNPFLNLTVD F KIGSVAATRAAAEDAYHV+RKG I      + LKKMCKEGAYWGTVAGVYVGMEYGVERIRG RDWKNAMIGGALTGA
Subjt:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA

Query:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT
        +VSAAS++NRDKI IDAITGGAVATAAEF+NYLT
Subjt:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT

SwissProt top hitse value%identityAlignment
Q0WMZ5 Outer envelope pore protein 16-2, chloroplastic8.6e-1430.32Show/hide
Query:  VIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGC------IPIPY----------------------SLLKKMCKEGAYWGTVAGVYVGMEYGV
        + D+G+P LN   D+F K   V A +A + +AY  +  G       +  P                       +L+K   KE   WG  AG+Y G+ YG+
Subjt:  VIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGC------IPIPY----------------------SLLKKMCKEGAYWGTVAGVYVGMEYGV

Query:  ERIR-GTRDWKNAMIGGALTGALVSAASS--NNRDKIAIDAITGGAVATAAEFLN
          +R G  DW+N+ + GALTGA ++  +S   + +++   A+TG A++TAA  L+
Subjt:  ERIR-GTRDWKNAMIGGALTGALVSAASS--NNRDKIAIDAITGGAVATAAEFLN

Q41050 Outer envelope pore protein 16, chloroplastic3.4e-5578.36Show/hide
Query:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA
        PKLDVVIDMGNPFLNLTVD F KIG+VAATR+ AED +H++RKG I        LKKMCKEGAYWG +AGVYVGMEYGVERIRGTRDWKNAM GGA+TGA
Subjt:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIP--YSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA

Query:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT
        LVSAAS+N +DKIA+DAITG A+ATAAEF+NYLT
Subjt:  LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT

Q9LZH8 Outer envelope pore protein 16-4, chloroplastic1.5e-0530.61Show/hide
Query:  PFLNLTVDAFFKI---GSVAATRAAAEDAYHVLRKGCIPIPYSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASSN
        P  +LTV++  ++   G +    A   DA  +   G     + + K + + G   G V+GV+     G++R RG  DW NA++GGA+ GA V+ ++ N
Subjt:  PFLNLTVDAFFKI---GSVAATRAAAEDAYHVLRKGCIPIPYSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASSN

Q9ZV24 Outer envelope pore protein 16-1, chloroplastic6.3e-4160.31Show/hide
Query:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCI--PIPYSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA
        PKL V +DMGNPFLNLTVDAF KIG+V  T++ AED Y  + KG +        LKK+CKEG YWG   GVY+G EYG+ERIRG+RDWKNAM+ GA TGA
Subjt:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCI--PIPYSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA

Query:  LVSAASSNNRDKIAIDAITGGAVATAAEFLN
        ++SA     +D I IDAI GGA+ATA++F+N
Subjt:  LVSAASSNNRDKIAIDAITGGAVATAAEFLN

Arabidopsis top hitse value%identityAlignment
AT2G28900.1 outer plastid envelope protein 16-14.5e-4260.31Show/hide
Query:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCI--PIPYSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA
        PKL V +DMGNPFLNLTVDAF KIG+V  T++ AED Y  + KG +        LKK+CKEG YWG   GVY+G EYG+ERIRG+RDWKNAM+ GA TGA
Subjt:  PKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCI--PIPYSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA

Query:  LVSAASSNNRDKIAIDAITGGAVATAAEFLN
        ++SA     +D I IDAI GGA+ATA++F+N
Subjt:  LVSAASSNNRDKIAIDAITGGAVATAAEFLN

AT3G62880.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein1.0e-0630.61Show/hide
Query:  PFLNLTVDAFFKI---GSVAATRAAAEDAYHVLRKGCIPIPYSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASSN
        P  +LTV++  ++   G +    A   DA  +   G     + + K + + G   G V+GV+     G++R RG  DW NA++GGA+ GA V+ ++ N
Subjt:  PFLNLTVDAFFKI---GSVAATRAAAEDAYHVLRKGCIPIPYSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASSN

AT3G62880.2 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein1.0e-0630.61Show/hide
Query:  PFLNLTVDAFFKI---GSVAATRAAAEDAYHVLRKGCIPIPYSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASSN
        P  +LTV++  ++   G +    A   DA  +   G     + + K + + G   G V+GV+     G++R RG  DW NA++GGA+ GA V+ ++ N
Subjt:  PFLNLTVDAFFKI---GSVAATRAAAEDAYHVLRKGCIPIPYSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASSN

AT4G16160.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein6.1e-1530.72Show/hide
Query:  VIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHV--------------------------LRKGCIPIPYSLLKKMCKEGAYWGTVAGVYVGMEYGVER
        + D+G+P LN   D+F K   V A +A + +AY                            LR        +L+K   KE   WG  AG+Y G+ YG+  
Subjt:  VIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHV--------------------------LRKGCIPIPYSLLKKMCKEGAYWGTVAGVYVGMEYGVER

Query:  IR-GTRDWKNAMIGGALTGALVSAASS--NNRDKIAIDAITGGAVATAAEFLN
        +R G  DW+N+ + GALTGA ++  +S   + +++   A+TG A++TAA  L+
Subjt:  IR-GTRDWKNAMIGGALTGALVSAASS--NNRDKIAIDAITGGAVATAAEFLN

AT4G16160.2 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein6.1e-1530.32Show/hide
Query:  VIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGC------IPIPY----------------------SLLKKMCKEGAYWGTVAGVYVGMEYGV
        + D+G+P LN   D+F K   V A +A + +AY  +  G       +  P                       +L+K   KE   WG  AG+Y G+ YG+
Subjt:  VIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGC------IPIPY----------------------SLLKKMCKEGAYWGTVAGVYVGMEYGV

Query:  ERIR-GTRDWKNAMIGGALTGALVSAASS--NNRDKIAIDAITGGAVATAAEFLN
          +R G  DW+N+ + GALTGA ++  +S   + +++   A+TG A++TAA  L+
Subjt:  ERIR-GTRDWKNAMIGGALTGALVSAASS--NNRDKIAIDAITGGAVATAAEFLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGGCAAAAGCAGGGCCGGCGCCATCCTCCACCGATGCCCAAGCTCGACGTCGTCATCGACATGGGCAACCCCTTCCTCAACCTCACCGTCGACGCCTTCTTCAAGATCGG
ATCCGTCGCTGCTACGCGTGCCGCCGCCGAGGATGCCTATCATGTTCTTAGAAAAGGTTGTATCCCTATTCCCTATTCCCTCTTGAAGAAAATGTGTAAAGAAGGTGCAT
ACTGGGGAACCGTAGCTGGAGTTTATGTTGGTATGGAGTATGGGGTAGAAAGGATTCGTGGCACAAGAGATTGGAAAAATGCTATGATTGGAGGTGCTTTGACGGGGGCT
CTGGTATCAGCAGCGAGCAGCAACAACCGAGACAAAATCGCCATCGATGCGATTACAGGAGGGGCTGTTGCAACCGCTGCGGAGTTCCTAAACTATCTTACT
mRNA sequenceShow/hide mRNA sequence
CGGCAAAAGCAGGGCCGGCGCCATCCTCCACCGATGCCCAAGCTCGACGTCGTCATCGACATGGGCAACCCCTTCCTCAACCTCACCGTCGACGCCTTCTTCAAGATCGG
ATCCGTCGCTGCTACGCGTGCCGCCGCCGAGGATGCCTATCATGTTCTTAGAAAAGGTTGTATCCCTATTCCCTATTCCCTCTTGAAGAAAATGTGTAAAGAAGGTGCAT
ACTGGGGAACCGTAGCTGGAGTTTATGTTGGTATGGAGTATGGGGTAGAAAGGATTCGTGGCACAAGAGATTGGAAAAATGCTATGATTGGAGGTGCTTTGACGGGGGCT
CTGGTATCAGCAGCGAGCAGCAACAACCGAGACAAAATCGCCATCGATGCGATTACAGGAGGGGCTGTTGCAACCGCTGCGGAGTTCCTAAACTATCTTACT
Protein sequenceShow/hide protein sequence
RQKQGRRHPPPMPKLDVVIDMGNPFLNLTVDAFFKIGSVAATRAAAEDAYHVLRKGCIPIPYSLLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGALTGA
LVSAASSNNRDKIAIDAITGGAVATAAEFLNYLT