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MS013082 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013082
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationscaffold459:79446..79670
RNA-Seq ExpressionMS013082
SyntenyMS013082
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606797.1 EPIDERMAL PATTERNING FACTOR-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2881.33Show/hide
Query:  AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP
        A GG  SL +K VLGSKPP+C+GKCLNCRPC A+LVVPEHRERKGFE  L RREEDDSYYLLHWKC+CGNKLYQP
Subjt:  AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP

XP_022153574.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Momordica charantia]3.6e-3797.33Show/hide
Query:  AAGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP
        AAGGG GSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRRE+DDSYYLLHWKCRCGNKLYQP
Subjt:  AAGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP

XP_022948690.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita moschata]1.4e-2881.33Show/hide
Query:  AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP
        A GG  SL +K VLGSKPP+C+GKCLNCRPC+A+LVVPEHRERKGFE  L RREEDDSYYLLHWKC+CGNKLYQP
Subjt:  AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP

XP_022998271.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita maxima]6.2e-2981.33Show/hide
Query:  AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP
        A GG  SL +K VLGSKPP+C+GKCLNCRPC+A+LVVPEHRERKGFE  L RREEDDSYYLLHWKC+CGNKLYQP
Subjt:  AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP

XP_023525861.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita pepo subsp. pepo]4.7e-2982.67Show/hide
Query:  AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP
        A GG  SL +K VLGSKPP+CIGKCLNCRPC+A+LVVPEHRERKGFE  L RREEDDSYYLLHWKC+CGNKLYQP
Subjt:  AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP

TrEMBL top hitse value%identityAlignment
A0A1S3BZD4 Epidermal patterning factor-like protein2.8e-2782.61Show/hide
Query:  SLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP
        SLQ++TVLGSKPP+C+GKCLNCRPC+A LVVPEH ERK FE  L RREEDDSYYLLHWKC+CGNKLYQP
Subjt:  SLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP

A0A5D3E1Z8 Epidermal patterning factor-like protein2.8e-2782.61Show/hide
Query:  SLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP
        SLQ++TVLGSKPP+C+GKCLNCRPC+A LVVPEH ERK FE  L RREEDDSYYLLHWKC+CGNKLYQP
Subjt:  SLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP

A0A6J1DJG7 Epidermal patterning factor-like protein1.7e-3797.33Show/hide
Query:  AAGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP
        AAGGG GSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRRE+DDSYYLLHWKCRCGNKLYQP
Subjt:  AAGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP

A0A6J1GAL3 Epidermal patterning factor-like protein6.7e-2981.33Show/hide
Query:  AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP
        A GG  SL +K VLGSKPP+C+GKCLNCRPC+A+LVVPEHRERKGFE  L RREEDDSYYLLHWKC+CGNKLYQP
Subjt:  AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP

A0A6J1K9T3 Epidermal patterning factor-like protein3.0e-2981.33Show/hide
Query:  AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP
        A GG  SL +K VLGSKPP+C+GKCLNCRPC+A+LVVPEHRERKGFE  L RREEDDSYYLLHWKC+CGNKLYQP
Subjt:  AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKCRCGNKLYQP

SwissProt top hitse value%identityAlignment
P43212 Polygalacturonase4.9e-0534.38Show/hide
Query:  KTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP
        + +LGS+PP C  KC  C PC A LV+              R     YY   W C    K+Y P
Subjt:  KTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP

Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 84.5e-0634.25Show/hide
Query:  GSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDS--YYLLHWKCRCGNKLYQP
        G     +++V+GS+PP C  KC NC+PC     +P   + +G       ++DDS  YY + W CRC +++++P
Subjt:  GSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDS--YYLLHWKCRCGNKLYQP

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 62.0e-0642.62Show/hide
Query:  LGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP
        LGS PP+C  KC  C PC      P H       P+T       YY   W+C+CGNKLY P
Subjt:  LGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 41.9e-0436.67Show/hide
Query:  GSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP
        GS PP C  KC  C+PC    V  +       E          YY   W+C+CGNKL+ P
Subjt:  GSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 23.8e-0528.89Show/hide
Query:  AGGGSGSLQEKTVLGSKPPQCIG-KCLNCRPCSATLVVPEHRERKGFEPL---------------TRREEDDSYYLLHWKCRCGNKLYQP
        +G     +  + ++GS+PP+C   +C +C  C A + VP + + K   PL               TR ++  +Y  + WKC+CGN +Y P
Subjt:  AGGGSGSLQEKTVLGSKPPQCIG-KCLNCRPCSATLVVPEHRERKGFEPL---------------TRREEDDSYYLLHWKCRCGNKLYQP

Arabidopsis top hitse value%identityAlignment
AT1G80133.1 unknown protein3.2e-0734.25Show/hide
Query:  GSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDS--YYLLHWKCRCGNKLYQP
        G     +++V+GS+PP C  KC NC+PC     +P   + +G       ++DDS  YY + W CRC +++++P
Subjt:  GSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDS--YYLLHWKCRCGNKLYQP

AT2G30370.1 allergen-related1.4e-0742.62Show/hide
Query:  LGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP
        LGS PP+C  KC  C PC      P H       P+T       YY   W+C+CGNKLY P
Subjt:  LGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP

AT2G30370.2 allergen-related1.4e-0742.62Show/hide
Query:  LGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP
        LGS PP+C  KC  C PC      P H       P+T       YY   W+C+CGNKLY P
Subjt:  LGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)1.3e-0536.67Show/hide
Query:  GSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP
        GS PP C  KC  C+PC    V  +       E          YY   W+C+CGNKL+ P
Subjt:  GSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP

AT4G37810.1 unknown protein2.7e-0628.89Show/hide
Query:  AGGGSGSLQEKTVLGSKPPQCIG-KCLNCRPCSATLVVPEHRERKGFEPL---------------TRREEDDSYYLLHWKCRCGNKLYQP
        +G     +  + ++GS+PP+C   +C +C  C A + VP + + K   PL               TR ++  +Y  + WKC+CGN +Y P
Subjt:  AGGGSGSLQEKTVLGSKPPQCIG-KCLNCRPCSATLVVPEHRERKGFEPL---------------TRREEDDSYYLLHWKCRCGNKLYQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGGCGGGCGGTGGCAGCGGGAGCTTGCAGGAGAAGACGGTGCTGGGGTCGAAGCCGCCGCAATGCATCGGGAAGTGCTTGAATTGCCGGCCCTGCTCGGCGACCCTGGT
GGTGCCTGAGCACCGTGAGAGGAAGGGATTCGAACCTCTGACTCGTAGAGAAGAAGATGATAGCTATTATCTTCTGCATTGGAAATGCAGATGTGGGAATAAGCTTTATC
AGCCT
mRNA sequenceShow/hide mRNA sequence
GCGGCGGGCGGTGGCAGCGGGAGCTTGCAGGAGAAGACGGTGCTGGGGTCGAAGCCGCCGCAATGCATCGGGAAGTGCTTGAATTGCCGGCCCTGCTCGGCGACCCTGGT
GGTGCCTGAGCACCGTGAGAGGAAGGGATTCGAACCTCTGACTCGTAGAGAAGAAGATGATAGCTATTATCTTCTGCATTGGAAATGCAGATGTGGGAATAAGCTTTATC
AGCCT
Protein sequenceShow/hide protein sequence
AAGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP