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MS013085 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013085
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold459:92126..92608
RNA-Seq ExpressionMS013085
SyntenyMS013085
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454240.1 PREDICTED: uncharacterized protein LOC103494703 [Cucumis melo]1.1e-3571.32Show/hide
Query:  MSSILSSQGLVIATAMVVSTTALFLAFSKP-----DKIPLPSSKSLRSCFSSGACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRI
        MSSILSSQGLVIATAMVVS+TALFLAFS         I  PS+  L SCFSS   KK+KKKKKVRFAEDVKEP GNGEEYR+EHDEK+ + E   R RRI
Subjt:  MSSILSSQGLVIATAMVVSTTALFLAFSKP-----DKIPLPSSKSLRSCFSSGACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRI

Query:  SCRNQIPPNRVALYNGILKQRSHRMECSF
        SCRN IP NR+ALYNGILK RS R++CSF
Subjt:  SCRNQIPPNRVALYNGILKQRSHRMECSF
XP_022153638.1 uncharacterized protein LOC111021094 [Momordica charantia]3.5e-5394.53Show/hide
Query:  MSSILSSQGLVIATAMVVSTTALFLAFSKPDKIPLPSSKSLRSCFSSG----ACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS
        MSSILSSQGLVIATAMVVSTTALFLAFSKPDKIPLPSSKSLRSCFSS       KKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS
Subjt:  MSSILSSQGLVIATAMVVSTTALFLAFSKPDKIPLPSSKSLRSCFSSG----ACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS

Query:  CRNQIPPNRVALYNGILKQRSHRMECSF
        CRNQIPPNRVALYNGILKQRSHRMECSF
Subjt:  CRNQIPPNRVALYNGILKQRSHRMECSF
XP_022955913.1 uncharacterized protein LOC111457756 [Cucurbita moschata]2.5e-3575Show/hide
Query:  MSSILSSQGLVIATAMVVSTTALFLAFSKPDKI-PLPSSKSLRSCFSS---GACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS
        MSSIL+SQGLVIATAMVVS+TALFLAFSK  KI PLPS   L SCFSS      KKKKKKKKVRFAEDVKEP GNGEEYR+EHDE++AMAE R       
Subjt:  MSSILSSQGLVIATAMVVSTTALFLAFSKPDKI-PLPSSKSLRSCFSS---GACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS

Query:  CRNQIPPNRVALYNGILKQRSHRMECSF
        CRN+IP NRVALYNGILKQRS R +CSF
Subjt:  CRNQIPPNRVALYNGILKQRSHRMECSF
XP_022979503.1 uncharacterized protein LOC111479184 [Cucurbita maxima]5.6e-3574.8Show/hide
Query:  MSSILSSQGLVIATAMVVSTTALFLAFSKPDKI-PLPSSKSLRSCFSSG-ACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS-C
        MSSIL+SQGLVIATAMVVS+TALFLAFSK  KI PLPS   L SCFSS    KKKKKKKKVRFAEDVKEP GNGEEYR+EHDE++ MAE R      S C
Subjt:  MSSILSSQGLVIATAMVVSTTALFLAFSKPDKI-PLPSSKSLRSCFSSG-ACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS-C

Query:  RNQIPPNRVALYNGILKQRSHRMECSF
        RN+IP NRVALYNG+LKQRS R +CSF
Subjt:  RNQIPPNRVALYNGILKQRSHRMECSF
XP_023528178.1 uncharacterized protein LOC111791169 [Cucurbita pepo subsp. pepo]6.0e-3777.34Show/hide
Query:  MSSILSSQGLVIATAMVVSTTALFLAFSKPDKI-PLPSSKSLRSCFSSG-ACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS--
        MSSIL+SQGLVIATAMVVS+TALFLAFS   KI PLPS   L SCFSS    KKKKKKKKVRFAEDVKEP GNGEEYR+EHDE+LAMAE R R R  S  
Subjt:  MSSILSSQGLVIATAMVVSTTALFLAFSKPDKI-PLPSSKSLRSCFSSG-ACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS--

Query:  CRNQIPPNRVALYNGILKQRSHRMECSF
        CRN+IP NRVALYNGILKQRS R +CSF
Subjt:  CRNQIPPNRVALYNGILKQRSHRMECSF
TrEMBL top hitse value%identityAlignment
A0A0A0KVF6 Uncharacterized protein1.3e-3468.94Show/hide
Query:  MSSILSSQGLVIATAMVVSTTALFLAFS----KPDKIPLPSSKSLRSCFSSGACK----KKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERR
        MSSILSSQ LV+ATAMVVS+TALFLAFS    K     +P S SL  CFSS   K    KKKKKKKVRFAEDVKEP GNGEEYR+EHDEK+ + E   RR
Subjt:  MSSILSSQGLVIATAMVVSTTALFLAFS----KPDKIPLPSSKSLRSCFSSGACK----KKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERR

Query:  RRISCRNQIPPNRVALYNGILKQRSHRMECSF
        RRISCRN +P NR+ALYNGILK RS R++CSF
Subjt:  RRISCRNQIPPNRVALYNGILKQRSHRMECSF
A0A1S3BY99 uncharacterized protein LOC1034947035.4e-3671.32Show/hide
Query:  MSSILSSQGLVIATAMVVSTTALFLAFSKP-----DKIPLPSSKSLRSCFSSGACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRI
        MSSILSSQGLVIATAMVVS+TALFLAFS         I  PS+  L SCFSS   KK+KKKKKVRFAEDVKEP GNGEEYR+EHDEK+ + E   R RRI
Subjt:  MSSILSSQGLVIATAMVVSTTALFLAFSKP-----DKIPLPSSKSLRSCFSSGACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRI

Query:  SCRNQIPPNRVALYNGILKQRSHRMECSF
        SCRN IP NR+ALYNGILK RS R++CSF
Subjt:  SCRNQIPPNRVALYNGILKQRSHRMECSF
A0A6J1DI03 uncharacterized protein LOC1110210941.7e-5394.53Show/hide
Query:  MSSILSSQGLVIATAMVVSTTALFLAFSKPDKIPLPSSKSLRSCFSSG----ACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS
        MSSILSSQGLVIATAMVVSTTALFLAFSKPDKIPLPSSKSLRSCFSS       KKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS
Subjt:  MSSILSSQGLVIATAMVVSTTALFLAFSKPDKIPLPSSKSLRSCFSSG----ACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS

Query:  CRNQIPPNRVALYNGILKQRSHRMECSF
        CRNQIPPNRVALYNGILKQRSHRMECSF
Subjt:  CRNQIPPNRVALYNGILKQRSHRMECSF
A0A6J1GVB7 uncharacterized protein LOC1114577561.2e-3575Show/hide
Query:  MSSILSSQGLVIATAMVVSTTALFLAFSKPDKI-PLPSSKSLRSCFSS---GACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS
        MSSIL+SQGLVIATAMVVS+TALFLAFSK  KI PLPS   L SCFSS      KKKKKKKKVRFAEDVKEP GNGEEYR+EHDE++AMAE R       
Subjt:  MSSILSSQGLVIATAMVVSTTALFLAFSKPDKI-PLPSSKSLRSCFSS---GACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS

Query:  CRNQIPPNRVALYNGILKQRSHRMECSF
        CRN+IP NRVALYNGILKQRS R +CSF
Subjt:  CRNQIPPNRVALYNGILKQRSHRMECSF
A0A6J1IWF1 uncharacterized protein LOC1114791842.7e-3574.8Show/hide
Query:  MSSILSSQGLVIATAMVVSTTALFLAFSKPDKI-PLPSSKSLRSCFSSG-ACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS-C
        MSSIL+SQGLVIATAMVVS+TALFLAFSK  KI PLPS   L SCFSS    KKKKKKKKVRFAEDVKEP GNGEEYR+EHDE++ MAE R      S C
Subjt:  MSSILSSQGLVIATAMVVSTTALFLAFSKPDKI-PLPSSKSLRSCFSSG-ACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS-C

Query:  RNQIPPNRVALYNGILKQRSHRMECSF
        RN+IP NRVALYNG+LKQRS R +CSF
Subjt:  RNQIPPNRVALYNGILKQRSHRMECSF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52565.1 unknown protein5.8e-2253.49Show/hide
Query:  MSSILS-SQGLVIATAMVVSTTALFLAFSKPDKIPLPSSKS-LRSCFSSGACKK--KKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS
        M+ ILS S G+VIATAMV S+TALFLA S+       S +  LRSC SS   KK  K KKKKV+FAE+VKE  GNGEEYRK+   ++   +  +  +  S
Subjt:  MSSILS-SQGLVIATAMVVSTTALFLAFSKPDKIPLPSSKS-LRSCFSSGACKK--KKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRIS

Query:  -CRNQIPPNRVALYNGILKQRSHRMECSF
         CRN +P NR+ALYNGIL+ R HR++CS+
Subjt:  -CRNQIPPNRVALYNGILKQRSHRMECSF
AT3G15760.1 unknown protein3.1e-1543.51Show/hide
Query:  SSQGLVIATAMVVSTTALFLAFSK--------PDKIPLPSSKSLRSCFSSGACKKKKKK-KKVRFAEDVKEPSGNGEEYRKEHDEKLAMAE--NRERRRR
        S+  +VIATAMV S+TALFLA ++        P  +       LRSC SS   KK+ KK KKVRFA++VK+  GNGEEYR+    + ++ +   +  +  
Subjt:  SSQGLVIATAMVVSTTALFLAFSK--------PDKIPLPSSKSLRSCFSSGACKKKKKK-KKVRFAEDVKEPSGNGEEYRKEHDEKLAMAE--NRERRRR

Query:  ISCR-NQIPPNRVALYNGILKQRSHRMECSF
          CR + +P NR+ALYNGIL+ R HR++ S+
Subjt:  ISCR-NQIPPNRVALYNGILKQRSHRMECSF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCAATTCTGAGCTCCCAAGGTCTGGTAATTGCCACAGCCATGGTCGTCTCCACCACTGCTCTGTTCCTCGCCTTCTCAAAGCCCGACAAGATTCCTCTCCCCTC
CTCAAAATCCCTCCGTTCTTGCTTCTCTTCTGGTGCGTGCAAGAAGAAGAAGAAGAAGAAAAAGGTGAGATTTGCAGAGGACGTGAAGGAGCCGAGTGGGAACGGAGAGG
AGTACAGGAAAGAGCACGACGAGAAGCTGGCGATGGCGGAAAACAGAGAAAGAAGAAGAAGAATAAGCTGTAGAAATCAAATTCCGCCGAATCGAGTTGCTCTCTATAAT
GGAATTCTCAAGCAGCGATCGCACAGGATGGAATGTTCCTTT
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCAATTCTGAGCTCCCAAGGTCTGGTAATTGCCACAGCCATGGTCGTCTCCACCACTGCTCTGTTCCTCGCCTTCTCAAAGCCCGACAAGATTCCTCTCCCCTC
CTCAAAATCCCTCCGTTCTTGCTTCTCTTCTGGTGCGTGCAAGAAGAAGAAGAAGAAGAAAAAGGTGAGATTTGCAGAGGACGTGAAGGAGCCGAGTGGGAACGGAGAGG
AGTACAGGAAAGAGCACGACGAGAAGCTGGCGATGGCGGAAAACAGAGAAAGAAGAAGAAGAATAAGCTGTAGAAATCAAATTCCGCCGAATCGAGTTGCTCTCTATAAT
GGAATTCTCAAGCAGCGATCGCACAGGATGGAATGTTCCTTT
Protein sequenceShow/hide protein sequence
MSSILSSQGLVIATAMVVSTTALFLAFSKPDKIPLPSSKSLRSCFSSGACKKKKKKKKVRFAEDVKEPSGNGEEYRKEHDEKLAMAENRERRRRISCRNQIPPNRVALYN
GILKQRSHRMECSF