; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013090 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013090
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDCC family protein At1g52590, chloroplastic
Genome locationscaffold459:124942..126587
RNA-Seq ExpressionMS013090
SyntenyMS013090
Gene Ontology termsGO:0015035 - protein disulfide oxidoreductase activity (molecular function)
InterPro domainsIPR007263 - DCC1-like thiol-disulfide oxidoreductase family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581957.1 DCC family protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.7e-7784Show/hide
Query:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
        MA+P+ GR+PARF+ P  A  RPR  +AF SLS AT   TIDW+EATSDFFEKD+RPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
Subjt:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR

Query:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
        SGRAPDDISSVVLVEKDRSYIKSEAV+RIMEHLELPFPQLA FL+FVPLFVRN  Y+N+ADNRY LFGRSESCEI
Subjt:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
XP_022153577.1 DCC family protein At1g52590, chloroplastic [Momordica charantia]4.1e-92100Show/hide
Query:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
        MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
Subjt:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR

Query:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
        SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
Subjt:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
XP_022955810.1 DCC family protein At1g52590, chloroplastic [Cucurbita moschata]3.7e-7784Show/hide
Query:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
        MA+P+ GR+PARF+ P  A  RPR  +AF SLS AT   TIDW+EATSDFFEKD+RPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
Subjt:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR

Query:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
        SGRAPDDISSVVLVEKDRSYIKSEAV+RIMEHLELPFPQLA FL+FVPLFVRN  Y+N+ADNRY LFGRSESCEI
Subjt:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
XP_023527546.1 DCC family protein At1g52590, chloroplastic, partial [Cucurbita pepo subsp. pepo]4.9e-7784Show/hide
Query:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
        MA+P+ GR+PARF+ P  A  RPR  +AF SLS AT   TIDW+EATSDFFEKD+RPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
Subjt:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR

Query:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
        SGRAPDDISSVVLVEKDRSYIKSEAV+RIMEHLELPFPQLA FL+FVPLFVRN  Y+N+ADNRY LFGRSESCEI
Subjt:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
XP_038900615.1 DCC family protein At1g52590, chloroplastic [Benincasa hispida]1.4e-7986.86Show/hide
Query:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
        MA+P+ G IPARF+PP  A+ARP H+I+ ASLSP TK ETIDW+EATSDFFEKD+RPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
Subjt:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR

Query:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
        SGRAPDDISSVVLVEKDRSYIKSEAV+RIME+LELPFPQLA FLQFVPLFVRN VY+N+ADNRY LFGRSESCEI
Subjt:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
TrEMBL top hitse value%identityAlignment
A0A1S3BZD9 DCC family protein At1g52590, chloroplastic1.5e-7685.23Show/hide
Query:  MAIPVPGRIPARFLPPPQAQA-RPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLR
        MA+P+ GR PA FLPP   +A    H IA ASLSP TK ETIDW+EATSDFFEKD+RPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQS+AGKKLLR
Subjt:  MAIPVPGRIPARFLPPPQAQA-RPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLR

Query:  RSGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
        RSGRAPDDISSVVLVEKDRSYIKSEAV+RIME+LELPFPQLAFFLQFVPLFVRN VY+N+ADNRY LFGRSESCEI
Subjt:  RSGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
A0A5D3E0H0 DCC family protein1.5e-7685.23Show/hide
Query:  MAIPVPGRIPARFLPPPQAQA-RPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLR
        MA+P+ GR PA FLPP   +A    H IA ASLSP TK ETIDW+EATSDFFEKD+RPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQS+AGKKLLR
Subjt:  MAIPVPGRIPARFLPPPQAQA-RPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLR

Query:  RSGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
        RSGRAPDDISSVVLVEKDRSYIKSEAV+RIME+LELPFPQLAFFLQFVPLFVRN VY+N+ADNRY LFGRSESCEI
Subjt:  RSGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
A0A6J1DJB0 DCC family protein At1g52590, chloroplastic2.0e-92100Show/hide
Query:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
        MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
Subjt:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR

Query:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
        SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
Subjt:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
A0A6J1GW36 DCC family protein At1g52590, chloroplastic1.8e-7784Show/hide
Query:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
        MA+P+ GR+PARF+ P  A  RPR  +AF SLS AT   TIDW+EATSDFFEKD+RPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
Subjt:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR

Query:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
        SGRAPDDISSVVLVEKDRSYIKSEAV+RIMEHLELPFPQLA FL+FVPLFVRN  Y+N+ADNRY LFGRSESCEI
Subjt:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
A0A6J1IYJ5 DCC family protein At1g52590, chloroplastic3.1e-7784Show/hide
Query:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
        MA+P+ GR+PARF+ P  A  RPR  +AF SLS AT   TIDW+EATSDFFEKD+RPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR
Subjt:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRR

Query:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
        SGRAPDDISSVVLVEKDRSYIKSEAV+RIMEHLELPFPQLA FL+FVPLFVRN  Y+N+ADNRY LFGRSESCEI
Subjt:  SGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
SwissProt top hitse value%identityAlignment
P40761 Uncharacterized protein YuxK7.4e-2043.1Show/hide
Query:  IMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYE
        ++LFDGVCNLCNG V+F+   D +  I   +LQSE G+ LL++SG   D   S V +E  + Y KS A I++  HL  P+     F   VP  VR+ VY 
Subjt:  IMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYE

Query:  NVADNRYRLFGRSESC
         +A NRY+ FG+   C
Subjt:  NVADNRYRLFGRSESC
Q9SSR1 DCC family protein At1g52590, chloroplastic9.6e-6068.18Show/hide
Query:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPAT-KGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLR
        MAI +P     R     +AQ R R S   AS +  T + +++DW++ TS FFE+D RPIMLFDGVCNLCNGGV+FVR +DRNR IR EALQSEAGKKLL 
Subjt:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPAT-KGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLR

Query:  RSGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
        RSGRAPDDISSVVLVE DRSYIKSEAV++IM++++LPFPQLAFFLQF PLFVR+F+YENVA+NRY +FGRS+SCE+
Subjt:  RSGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
Arabidopsis top hitse value%identityAlignment
AT1G24095.1 Putative thiol-disulphide oxidoreductase DCC4.3e-1536.44Show/hide
Query:  IMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSYI--KSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFV
        ++++DGVC+LC+GGV+++   D+ R+I+   LQS+A +  L  SG   +D+    L  +   +    S A +R++ +L LP+  L  F   VP  +R+ V
Subjt:  IMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSYI--KSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFV

Query:  YENVADNRYRLFGRSESC
        Y+ VA NRY  FG++E C
Subjt:  YENVADNRYRLFGRSESC
AT1G52590.1 Putative thiol-disulphide oxidoreductase DCC6.8e-6168.18Show/hide
Query:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPAT-KGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLR
        MAI +P     R     +AQ R R S   AS +  T + +++DW++ TS FFE+D RPIMLFDGVCNLCNGGV+FVR +DRNR IR EALQSEAGKKLL 
Subjt:  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPAT-KGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLR

Query:  RSGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
        RSGRAPDDISSVVLVE DRSYIKSEAV++IM++++LPFPQLAFFLQF PLFVR+F+YENVA+NRY +FGRS+SCE+
Subjt:  RSGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATTCCGGTTCCCGGGAGAATTCCGGCACGATTTCTCCCGCCGCCTCAAGCGCAAGCTAGACCGCGGCATTCAATAGCTTTCGCCTCTTTATCTCCGGCGACCAA
AGGCGAAACGATAGACTGGATCGAAGCAACTTCTGACTTCTTCGAGAAAGATTCGAGACCGATAATGCTATTTGACGGTGTGTGCAATTTATGCAACGGAGGTGTAAGAT
TTGTTCGTGCTAATGACCGAAACAGAAGAATACGATTAGAGGCTCTACAAAGTGAAGCTGGCAAGAAGCTGCTTAGAAGGTCGGGAAGAGCACCGGATGATATTTCGAGT
GTTGTACTAGTTGAAAAGGATAGATCTTATATCAAATCTGAAGCTGTTATAAGAATAATGGAACACTTAGAGTTACCCTTTCCCCAGCTTGCCTTTTTCCTCCAGTTTGT
GCCACTGTTTGTTCGAAATTTTGTGTATGAAAACGTTGCAGATAACCGCTATAGGCTATTTGGACGCTCGGAGTCATGTGAAATA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATTCCGGTTCCCGGGAGAATTCCGGCACGATTTCTCCCGCCGCCTCAAGCGCAAGCTAGACCGCGGCATTCAATAGCTTTCGCCTCTTTATCTCCGGCGACCAA
AGGCGAAACGATAGACTGGATCGAAGCAACTTCTGACTTCTTCGAGAAAGATTCGAGACCGATAATGCTATTTGACGGTGTGTGCAATTTATGCAACGGAGGTGTAAGAT
TTGTTCGTGCTAATGACCGAAACAGAAGAATACGATTAGAGGCTCTACAAAGTGAAGCTGGCAAGAAGCTGCTTAGAAGGTCGGGAAGAGCACCGGATGATATTTCGAGT
GTTGTACTAGTTGAAAAGGATAGATCTTATATCAAATCTGAAGCTGTTATAAGAATAATGGAACACTTAGAGTTACCCTTTCCCCAGCTTGCCTTTTTCCTCCAGTTTGT
GCCACTGTTTGTTCGAAATTTTGTGTATGAAAACGTTGCAGATAACCGCTATAGGCTATTTGGACGCTCGGAGTCATGTGAAATA
Protein sequenceShow/hide protein sequence
MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISS
VVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI