; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013094 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013094
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPeptide deformylase
Genome locationscaffold459:143805..145371
RNA-Seq ExpressionMS013094
SyntenyMS013094
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0018206 - peptidyl-methionine modification (biological process)
GO:0031365 - N-terminal protein amino acid modification (biological process)
GO:0043686 - co-translational protein modification (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0042586 - peptide deformylase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR023635 - Peptide deformylase
IPR036821 - Peptide deformylase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044431.1 peptide deformylase 1A [Cucumis melo var. makuwa]2.9e-12986.99Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+ IHRFSFRLFPISLA  C  PS   P F KL HR  SS     IPKF+P  +TYSSSSTSIAKAGWFLGLGEQKKMSLP+IVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEKIQKIIDDMVL MRKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NPKLK KSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        +LDVE+ G DR+GNPIKVDASGWQARILQHECDHLDGTLYVDKM+PRTFRTAENLTLPLAEGCPKLG R
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

XP_004152208.2 peptide deformylase 1A, chloroplastic/mitochondrial [Cucumis sativus]1.7e-12986.99Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+ IHRFSFRLFPISLA  C  PS   P F KL HRP SS     IPKF+P  +TYSSSSTSIAKAGWFLGLGEQKKMSLP+IVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEK+QKIIDDM+L MRKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRR FDLLVI+NPKLK KSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        +LDVEV G DRDGNPIKVDASGWQARILQHECDHLDGTLYVDKM+PRTFRT ENLTLPLAEGCPKLGAR
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

XP_008454248.1 PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A, chloroplastic/mitochondrial [Cucumis melo]2.2e-12986.99Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+ IHRFSFRLFPISLA  C  PS   P F KL HR  SS     IPKF+P  +TYSSSSTSIAKAGWFLGLGEQKKMSLP+IVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEKIQKIIDDMVL MRKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NPKLK KSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        +LDVE+ G DR+GNPIKVDASGWQARILQHECDHLDGTLYVDKM+PRTFRTAENLTLPLAEGCPKLG R
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

XP_022153571.1 peptide deformylase 1A, chloroplastic/mitochondrial [Momordica charantia]2.9e-15399.63Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFR AENLTLPLAEGCPKLGAR
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

XP_038878019.1 peptide deformylase 1A, chloroplastic/mitochondrial [Benincasa hispida]1.4e-12886.25Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+TIHRFSFRLFPISLA  CL PSS TP F    +R  SS     IPKF+P  +TY SSSTSIAKAGWFLGLGE+KKM LPTIVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEKIQKIID+MVLAMRKAPG+GLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NPKLK KSNKTALFFEGC+SVDGFRAVVER
Subjt:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        +L+VEV G DRDG+PIKVDASGWQARILQHECDHLDGTLYVDKM+PRTFRTAENLTLPLAEGCPKLGAR
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

TrEMBL top hitse value%identityAlignment
A0A0A0KWR7 Peptide deformylase8.2e-13086.99Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+ IHRFSFRLFPISLA  C  PS   P F KL HRP SS     IPKF+P  +TYSSSSTSIAKAGWFLGLGEQKKMSLP+IVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEK+QKIIDDM+L MRKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRR FDLLVI+NPKLK KSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        +LDVEV G DRDGNPIKVDASGWQARILQHECDHLDGTLYVDKM+PRTFRT ENLTLPLAEGCPKLGAR
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

A0A1S3BY63 Peptide deformylase1.1e-12986.99Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+ IHRFSFRLFPISLA  C  PS   P F KL HR  SS     IPKF+P  +TYSSSSTSIAKAGWFLGLGEQKKMSLP+IVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEKIQKIIDDMVL MRKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NPKLK KSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        +LDVE+ G DR+GNPIKVDASGWQARILQHECDHLDGTLYVDKM+PRTFRTAENLTLPLAEGCPKLG R
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

A0A5D3E1C7 Peptide deformylase1.4e-12986.99Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+ IHRFSFRLFPISLA  C  PS   P F KL HR  SS     IPKF+P  +TYSSSSTSIAKAGWFLGLGEQKKMSLP+IVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEKIQKIIDDMVL MRKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NPKLK KSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        +LDVE+ G DR+GNPIKVDASGWQARILQHECDHLDGTLYVDKM+PRTFRTAENLTLPLAEGCPKLG R
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

A0A6J1DL13 Peptide deformylase1.4e-15399.63Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFR AENLTLPLAEGCPKLGAR
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

A0A6J1KDU7 Peptide deformylase4.0e-12484.27Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP
        M+T+HRFSFRL P SLA  CL PSSATP+F  L   PTSS +   IPKF+P R++YSSS + IAKAGWFLGLG++ K SLP IV AGDPVLHEPAREVDP
Subjt:  MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER
        KEIGS+KIQKIIDDMV+AMR APGVGLAA QIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NPKLK KSNKTALFFEGCLSVDGFRAVVER
Subjt:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVER

Query:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLG
        HLDVEVVGLDR GN IKVDASGWQARILQHECDHL+GTLYVDKM+PRTFRTAENLTLPLAEGCPKLG
Subjt:  HLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLG

SwissProt top hitse value%identityAlignment
B6RGY0 Peptide deformylase 1A, chloroplastic8.3e-8762.55Show/hide
Query:  LFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGL-------GEQKKMSL-PTIVKAGDPVLHEPAREVDPKE
        L P+S A   L+P++  P       R  S           P  + +SS   S    GW  GL       G    M++ P  VKAGDPVLHEPA++V P +
Subjt:  LFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGL-------GEQKKMSL-PTIVKAGDPVLHEPAREVDPKE

Query:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVERHL
        I SEK+Q +ID MV  MRKAPGVGLAAPQIG+PL+IIVLEDTQEYISYAPK++I+AQDRRPFDLLVI+NPKLK  S +TALFFEGCLSVDG+RA+VERHL
Subjt:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVERHL

Query:  DVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR
        DVEV GLDR+G PIKV+ASGWQARILQHECDHL+GTLYVD M+PRTFR  +NL LPL  GCP +GAR
Subjt:  DVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR

Q7NJV3 Peptide deformylase 15.8e-4047.67Show/hide
Query:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA
        IVK GDPVL   A+ ++  EI SE IQ++I  M   MR+APGVGLAAPQ+G+ ++++V+ED  EYI      E + ++R P    V++NP L  +  ++A
Subjt:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA

Query:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAEN
        +FFEGCLS+ G++ +V R   V V  LD    P+ + A GW ARILQHE DHL+G L VD+M  +TF T EN
Subjt:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAEN

Q825U9 Peptide deformylase 31.5e-3241.4Show/hide
Query:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA
        IV AGDPVL   A   D  ++G   + + ++ + L M  APGVGLAAPQ+G+ LRI V+ED     +  P+E    + R P    V+VNP  +   +  A
Subjt:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA

Query:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGA
         FFEGCLSV G++AVV R   V +  LD  G  +  + +GW ARI+QHE DHLDG LY+D+   R+  + E + L  ++  P+  A
Subjt:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGA

Q9FUZ0 Peptide deformylase 1A, chloroplastic1.3e-9579.07Show/hide
Query:  RQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAP
        ++ YSS++   A+AGWFLGLGE+KK ++P IVKAGDPVLHEP++++  +EIGSE+IQKII++MV  MR APGVGLAAPQIGIPL+IIVLEDT EYISYAP
Subjt:  RQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAP

Query:  KEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTA
        K+E KAQDRRPF LLVI+NPKLK K NKTALFFEGCLSVDGFRAVVERHL+VEV GLDR+G  IKVDASGWQARILQHE DHLDGTLYVDKM PRTFRT 
Subjt:  KEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTA

Query:  ENLTLPLAEGCPKLG
        ENL LPLA GCPKLG
Subjt:  ENLTLPLAEGCPKLG

Q9FV53 Peptide deformylase 1A, chloroplastic/mitochondrial1.8e-9466.18Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLN-------PSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGE-QKKMSLPTIVKAGDPVLH
        M+T+ R S RL P+S A  C +       P S+     KL++ PT                  SSSS+   KAGW LGLGE +KK+ LP IV +GDPVLH
Subjt:  MDTIHRFSFRLFPISLAHCCLN-------PSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGE-QKKMSLPTIVKAGDPVLH

Query:  EPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVD
        E AREVDP EIGSE+IQKIIDDM+  MR APGVGLAAPQIG+PLRIIVLEDT+EYISYAPKEEI AQ+RR FDL+V+VNP LK +SNK ALFFEGCLSVD
Subjt:  EPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVD

Query:  GFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLG
        GFRA VER+L+V V G DR G  I+V+ASGWQARILQHECDHLDG LYVDKM+PRTFRT +NL LPLAEGCPKLG
Subjt:  GFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLG

Arabidopsis top hitse value%identityAlignment
AT1G15390.1 peptide deformylase 1A1.3e-9566.18Show/hide
Query:  MDTIHRFSFRLFPISLAHCCLN-------PSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGE-QKKMSLPTIVKAGDPVLH
        M+T+ R S RL P+S A  C +       P S+     KL++ PT                  SSSS+   KAGW LGLGE +KK+ LP IV +GDPVLH
Subjt:  MDTIHRFSFRLFPISLAHCCLN-------PSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGE-QKKMSLPTIVKAGDPVLH

Query:  EPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVD
        E AREVDP EIGSE+IQKIIDDM+  MR APGVGLAAPQIG+PLRIIVLEDT+EYISYAPKEEI AQ+RR FDL+V+VNP LK +SNK ALFFEGCLSVD
Subjt:  EPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVD

Query:  GFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLG
        GFRA VER+L+V V G DR G  I+V+ASGWQARILQHECDHLDG LYVDKM+PRTFRT +NL LPLAEGCPKLG
Subjt:  GFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLG

AT5G14660.1 peptide deformylase 1B4.0e-2035.8Show/hide
Query:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA
        IV+  DP+L    + +D   I  E ++ ++D M   M K  G+GL+APQ+G+ ++++V     E     P E  +         +V+VNPK+K  S+K  
Subjt:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA

Query:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKM
         F EGCLS  G  A V R   V++   D  G    +  S   ARI QHE DHL+G L+ D+M
Subjt:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKM

AT5G14660.2 peptide deformylase 1B4.0e-2035.8Show/hide
Query:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA
        IV+  DP+L    + +D   I  E ++ ++D M   M K  G+GL+APQ+G+ ++++V     E     P E  +         +V+VNPK+K  S+K  
Subjt:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTA

Query:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKM
         F EGCLS  G  A V R   V++   D  G    +  S   ARI QHE DHL+G L+ D+M
Subjt:  LFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACCATTCACCGATTCTCCTTTCGTCTCTTCCCAATCTCTCTCGCCCATTGCTGTCTCAACCCTTCTTCAGCCACACCCAAATTCCCAAAACTTTTTCACAGACC
CACTTCTTCCTTCGATTTCGACTGCATTCCTAAATTTGTTCCGCCCCGCCAAACCTACAGCTCCTCTTCCACTTCGATTGCCAAAGCCGGTTGGTTTCTCGGCCTCGGAG
AGCAAAAGAAAATGAGCCTACCGACGATTGTGAAGGCCGGAGACCCAGTTCTGCACGAACCTGCCCGGGAAGTTGATCCTAAGGAAATAGGGTCCGAGAAGATCCAGAAG
ATTATCGACGATATGGTTTTGGCCATGAGGAAGGCTCCTGGAGTGGGTCTTGCAGCTCCCCAGATTGGAATTCCGTTAAGGATAATTGTTTTGGAAGACACTCAGGAATA
TATAAGTTATGCTCCTAAGGAGGAGATCAAAGCACAAGATAGGCGCCCTTTTGATCTTCTGGTGATCGTTAATCCAAAGCTAAAATGTAAAAGCAACAAAACTGCTCTGT
TTTTTGAAGGGTGCCTAAGTGTTGATGGATTTAGAGCGGTGGTTGAGCGCCACCTTGATGTTGAGGTAGTCGGTCTCGATCGAGATGGGAATCCTATCAAGGTGGATGCA
TCAGGTTGGCAGGCTCGAATTTTACAGCATGAATGTGATCATTTGGATGGAACTCTTTATGTCGATAAGATGCTACCTCGAACATTCAGAACGGCTGAAAATTTGACCTT
GCCTCTTGCTGAGGGTTGCCCCAAGCTCGGAGCTCGC
mRNA sequenceShow/hide mRNA sequence
ATGGACACCATTCACCGATTCTCCTTTCGTCTCTTCCCAATCTCTCTCGCCCATTGCTGTCTCAACCCTTCTTCAGCCACACCCAAATTCCCAAAACTTTTTCACAGACC
CACTTCTTCCTTCGATTTCGACTGCATTCCTAAATTTGTTCCGCCCCGCCAAACCTACAGCTCCTCTTCCACTTCGATTGCCAAAGCCGGTTGGTTTCTCGGCCTCGGAG
AGCAAAAGAAAATGAGCCTACCGACGATTGTGAAGGCCGGAGACCCAGTTCTGCACGAACCTGCCCGGGAAGTTGATCCTAAGGAAATAGGGTCCGAGAAGATCCAGAAG
ATTATCGACGATATGGTTTTGGCCATGAGGAAGGCTCCTGGAGTGGGTCTTGCAGCTCCCCAGATTGGAATTCCGTTAAGGATAATTGTTTTGGAAGACACTCAGGAATA
TATAAGTTATGCTCCTAAGGAGGAGATCAAAGCACAAGATAGGCGCCCTTTTGATCTTCTGGTGATCGTTAATCCAAAGCTAAAATGTAAAAGCAACAAAACTGCTCTGT
TTTTTGAAGGGTGCCTAAGTGTTGATGGATTTAGAGCGGTGGTTGAGCGCCACCTTGATGTTGAGGTAGTCGGTCTCGATCGAGATGGGAATCCTATCAAGGTGGATGCA
TCAGGTTGGCAGGCTCGAATTTTACAGCATGAATGTGATCATTTGGATGGAACTCTTTATGTCGATAAGATGCTACCTCGAACATTCAGAACGGCTGAAAATTTGACCTT
GCCTCTTGCTGAGGGTTGCCCCAAGCTCGGAGCTCGC
Protein sequenceShow/hide protein sequence
MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTSSFDFDCIPKFVPPRQTYSSSSTSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQK
IIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSNKTALFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDA
SGWQARILQHECDHLDGTLYVDKMLPRTFRTAENLTLPLAEGCPKLGAR