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MS013102 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013102
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCRC domain-containing protein TSO1-like
Genome locationscaffold459:197844..198014
RNA-Seq ExpressionMS013102
SyntenyMS013102
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR005172 - CRC domain
IPR044522 - CRC domain-containing protein TSO1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5206309.1 tesmin/TSO1-like CXC [Thalictrum thalictroides]2.6e-1154.39Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP
        YCECF+AG+YC   C C++C NK +YEDKV    +QI+S+N  AFAPK+ R+  D P
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP

PIA42518.1 hypothetical protein AQUCO_02000165v1 [Aquilegia coerulea]2.6e-1154.39Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP
        YCECF+AG+YC   C C++C NK +YEDKV    +QI+S+N  AFAPK+ R+  D P
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP

PIA42519.1 hypothetical protein AQUCO_02000165v1 [Aquilegia coerulea]2.6e-1154.39Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP
        YCECF+AG+YC   C C++C NK +YEDKV    +QI+S+N  AFAPK+ R+  D P
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP

PIA42522.1 hypothetical protein AQUCO_02000165v1 [Aquilegia coerulea]2.6e-1154.39Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP
        YCECF+AG+YC   C C++C NK +YEDKV    +QI+S+N  AFAPK+ R+  D P
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP

XP_022153578.1 CRC domain-containing protein TSO1-like [Momordica charantia]5.4e-25100Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP
        YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP

TrEMBL top hitse value%identityAlignment
A0A2G5DG64 CRC domain-containing protein1.3e-1154.39Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP
        YCECF+AG+YC   C C++C NK +YEDKV    +QI+S+N  AFAPK+ R+  D P
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP

A0A2G5DG74 CRC domain-containing protein1.3e-1154.39Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP
        YCECF+AG+YC   C C++C NK +YEDKV    +QI+S+N  AFAPK+ R+  D P
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP

A0A2G5DG99 CRC domain-containing protein1.3e-1154.39Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP
        YCECF+AG+YC   C C++C NK +YEDKV    +QI+S+N  AFAPK+ R+  D P
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP

A0A2G5DGB6 CRC domain-containing protein1.3e-1154.39Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP
        YCECF+AG+YC   C C++C NK +YEDKV    +QI+S+N  AFAPK+ R+  D P
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP

A0A6J1DHU8 CRC domain-containing protein TSO1-like2.6e-25100Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP
        YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP

SwissProt top hitse value%identityAlignment
F4JIF5 Protein tesmin/TSO1-like CXC 22.7e-1158.49Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS
        YCECF+AGVYC   C C DC NK  +ED V +  +QI+S+N  AFAPKV R S
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS

Q84JZ8 Protein tesmin/TSO1-like CXC 41.9e-0950.94Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS
        YCECFSAG++CG  C C++C NK  +ED V      I+++N  AFAPKV   S
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS

Q8L548 Protein tesmin/TSO1-like CXC 31.1e-0952.83Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS
        YCECF+AG YC   C C +C NK  ++D V +  +QI+S+N  AFAPKV R S
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS

Q9LUI3 CRC domain-containing protein TSO11.3e-1054.72Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS
        YCECF+AGVYC   C C DC NK  +E+ V +  +QI+S+N  AFAPKV R +
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS

Arabidopsis top hitse value%identityAlignment
AT3G04850.1 Tesmin/TSO1-like CXC domain-containing protein1.4e-1050.94Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS
        YCECFSAG++CG  C C++C NK  +ED V      I+++N  AFAPKV   S
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS

AT3G22760.1 Tesmin/TSO1-like CXC domain-containing protein8.0e-1152.83Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS
        YCECF+AG YC   C C +C NK  ++D V +  +QI+S+N  AFAPKV R S
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS

AT3G22780.1 Tesmin/TSO1-like CXC domain-containing protein9.5e-1254.72Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS
        YCECF+AGVYC   C C DC NK  +E+ V +  +QI+S+N  AFAPKV R +
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS

AT4G14770.1 TESMIN/TSO1-like CXC 21.9e-1258.49Show/hide
Query:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS
        YCECF+AGVYC   C C DC NK  +ED V +  +QI+S+N  AFAPKV R S
Subjt:  YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATTGTGAGTGCTTTTCAGCTGGTGTTTATTGTGGAAATTCTTGTGGCTGTAAAGATTGCATCAACAAAATTGAATATGAGGATAAAGTTAAGTCTGTAAGTCGCCAAAT
TCAATCAAAAAATGCCTTTGCTTTTGCACCAAAGGTCACGAGGCAATCACTTGATTTTCCA
mRNA sequenceShow/hide mRNA sequence
TATTGTGAGTGCTTTTCAGCTGGTGTTTATTGTGGAAATTCTTGTGGCTGTAAAGATTGCATCAACAAAATTGAATATGAGGATAAAGTTAAGTCTGTAAGTCGCCAAAT
TCAATCAAAAAATGCCTTTGCTTTTGCACCAAAGGTCACGAGGCAATCACTTGATTTTCCA
Protein sequenceShow/hide protein sequence
YCECFSAGVYCGNSCGCKDCINKIEYEDKVKSVSRQIQSKNAFAFAPKVTRQSLDFP