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MS013106 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013106
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncytochrome c oxidase subunit 5b-2, mitochondrial-like
Genome locationscaffold459:226079..227404
RNA-Seq ExpressionMS013106
SyntenyMS013106
Gene Ontology termsGO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process)
GO:0005751 - mitochondrial respiratory chain complex IV (cellular component)
InterPro domainsIPR002124 - Cytochrome c oxidase, subunit Vb


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038130.1 cytochrome c oxidase subunit 5b-2 [Cucumis melo var. makuwa]9.0e-3595.65Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
        EAPAVIKSYYDER+VGCPGGEDEDEHDVVWFRL+KGVPHECPVCSQYFVLEVVGPGGSPDG+GDDDHHH
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH

XP_004151243.1 cytochrome c oxidase subunit 5b-2, mitochondrial [Cucumis sativus]1.2e-3494.2Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
        EAPAVIKSYYDER+VGCPGGEDEDEHDV+WFRL+KGVPHECPVCSQYFVLEVVGPGGSPDG+GDDDHHH
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH

XP_016900404.1 PREDICTED: LOW QUALITY PROTEIN: cytochrome c oxidase subunit 5b-2, mitochondrial [Cucumis melo]9.0e-3595.65Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
        EAPAVIKSYYDER+VGCPGGEDEDEHDVVWFRL+KGVPHECPVCSQYFVLEVVGPGGSPDG+GDDDHHH
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH

XP_022153651.1 cytochrome c oxidase subunit 5b-2, mitochondrial-like [Momordica charantia]4.1e-3598.55Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
        EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGD+DHHH
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH

XP_038896495.1 cytochrome c oxidase subunit 5b-2, mitochondrial-like [Benincasa hispida]1.0e-3394.2Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
        EAPAVIKSYYDER+VGCPGGE EDEHDVVWFRL+KGVPHECPVCSQYFVLEVVGPGGSPDG+GDDDHHH
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH

TrEMBL top hitse value%identityAlignment
A0A0A0LDH6 Uncharacterized protein5.7e-3594.2Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
        EAPAVIKSYYDER+VGCPGGEDEDEHDV+WFRL+KGVPHECPVCSQYFVLEVVGPGGSPDG+GDDDHHH
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH

A0A1S4DWP7 LOW QUALITY PROTEIN: cytochrome c oxidase subunit 5b-2, mitochondrial4.4e-3595.65Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
        EAPAVIKSYYDER+VGCPGGEDEDEHDVVWFRL+KGVPHECPVCSQYFVLEVVGPGGSPDG+GDDDHHH
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH

A0A5A7T437 Cytochrome c oxidase subunit 5b-24.4e-3595.65Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
        EAPAVIKSYYDER+VGCPGGEDEDEHDVVWFRL+KGVPHECPVCSQYFVLEVVGPGGSPDG+GDDDHHH
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH

A0A6J1DL93 cytochrome c oxidase subunit 5b-2, mitochondrial-like2.0e-3598.55Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
        EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGD+DHHH
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH

A0A6J1IV42 cytochrome c oxidase subunit 5b-1, mitochondrial-like1.4e-3394.2Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
        EAPAVIKSYYDER+VGCPGGE EDEHDVVWFRL+K VPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH

SwissProt top hitse value%identityAlignment
Q9LW15 Cytochrome c oxidase subunit 5b-1, mitochondrial2.2e-2876.06Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFG--DDDHHH
        EAPA++KSYYD+R+VGCPGGE EDEHDVVWF L+KG   ECPVC+QYF LEVVGPGG PDG G  DD+HHH
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFG--DDDHHH

Q9SSB8 Cytochrome c oxidase subunit 5b-2, mitochondrial1.5e-2779.1Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDH
        EAPAV+KSYYD R+VGCPGGE EDEHDVVWF L+KG   ECPVC+QYF LEVVGPGG PDG GDD H
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDH

Q9SSS5 Putative cytochrome c oxidase subunit 5b-like9.4e-1962.86Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDD-DHHH
        E+PAV++SY+D+R +GC GGE ED HDVVWF L KG   ECPVCSQYF        G PDG GDD DHHH
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDD-DHHH

Arabidopsis top hitse value%identityAlignment
AT1G52710.1 Rubredoxin-like superfamily protein6.7e-2062.86Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDD-DHHH
        E+PAV++SY+D+R +GC GGE ED HDVVWF L KG   ECPVCSQYF        G PDG GDD DHHH
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDD-DHHH

AT1G80230.1 Rubredoxin-like superfamily protein1.0e-2879.1Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDH
        EAPAV+KSYYD R+VGCPGGE EDEHDVVWF L+KG   ECPVC+QYF LEVVGPGG PDG GDD H
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDH

AT3G15640.1 Rubredoxin-like superfamily protein1.6e-2976.06Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFG--DDDHHH
        EAPA++KSYYD+R+VGCPGGE EDEHDVVWF L+KG   ECPVC+QYF LEVVGPGG PDG G  DD+HHH
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFG--DDDHHH

AT3G15640.2 Rubredoxin-like superfamily protein1.6e-2976.06Show/hide
Query:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFG--DDDHHH
        EAPA++KSYYD+R+VGCPGGE EDEHDVVWF L+KG   ECPVC+QYF LEVVGPGG PDG G  DD+HHH
Subjt:  EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFG--DDDHHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAGCTCCTGCTGTTATTAAGTCATATTATGACGAAAGAGTAGTTGGATGCCCTGGAGGTGAAGACGAGGATGAGCATGATGTTGTTTGGTTCCGGTTGAAGAAAGGCGT
GCCACATGAATGTCCTGTGTGCTCACAATATTTTGTGCTGGAAGTGGTGGGACCTGGAGGATCGCCCGATGGTTTTGGAGACGATGATCATCACCAT
mRNA sequenceShow/hide mRNA sequence
GAAGCTCCTGCTGTTATTAAGTCATATTATGACGAAAGAGTAGTTGGATGCCCTGGAGGTGAAGACGAGGATGAGCATGATGTTGTTTGGTTCCGGTTGAAGAAAGGCGT
GCCACATGAATGTCCTGTGTGCTCACAATATTTTGTGCTGGAAGTGGTGGGACCTGGAGGATCGCCCGATGGTTTTGGAGACGATGATCATCACCAT
Protein sequenceShow/hide protein sequence
EAPAVIKSYYDERVVGCPGGEDEDEHDVVWFRLKKGVPHECPVCSQYFVLEVVGPGGSPDGFGDDDHHH