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MS013107 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013107
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncytochrome c oxidase subunit 5b-2, mitochondrial-like
Genome locationscaffold459:229219..229793
RNA-Seq ExpressionMS013107
SyntenyMS013107
Gene Ontology termsGO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process)
GO:0005751 - mitochondrial respiratory chain complex IV (cellular component)
InterPro domainsIPR002124 - Cytochrome c oxidase, subunit Vb
IPR036972 - Cytochrome c oxidase, subunit Vb superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038130.1 cytochrome c oxidase subunit 5b-2 [Cucumis melo var. makuwa]1.6e-2978.95Show/hide
Query:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
        K+LKSLPSSS   S  LG ISQA RL A+SH SPS +  LF RHYASDSAD+GLKKKVEDVMPIATGHEREELEA+LEG+DILDI+HPVGPFGTK
Subjt:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK

XP_004151243.1 cytochrome c oxidase subunit 5b-2, mitochondrial [Cucumis sativus]7.4e-3078.95Show/hide
Query:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
        K+LKSLPSSS   S  LG ISQA RLAA+SH SPS + PLF RHYASDSAD+GLKK VEDVMPIATGHEREELEA+LEG+DILDI+HP+GPFGTK
Subjt:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK

XP_022153651.1 cytochrome c oxidase subunit 5b-2, mitochondrial-like [Momordica charantia]1.7e-42100Show/hide
Query:  KALKSLPSSSPNPSLGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
        KALKSLPSSSPNPSLGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
Subjt:  KALKSLPSSSPNPSLGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK

XP_022949516.1 cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita moschata]5.6e-3081.05Show/hide
Query:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
        KALKSLPSSS + S  LG ISQATRLAASS  S SPS  LF RHYASDSAD+GLKKK EDV+PI TGHEREELEA+LEGRDILDI+HPVGPFGTK
Subjt:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK

XP_023523890.1 cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita pepo subsp. pepo]5.6e-3081.05Show/hide
Query:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
        KALKSLPSSS + S  LG ISQATRLAASS  S SPS  LF RHYASDSAD+GLKKK EDV+PI TGHEREELEA+LEGRDILDI+HPVGPFGTK
Subjt:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK

TrEMBL top hitse value%identityAlignment
A0A0A0LDH6 Uncharacterized protein3.6e-3078.95Show/hide
Query:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
        K+LKSLPSSS   S  LG ISQA RLAA+SH SPS + PLF RHYASDSAD+GLKK VEDVMPIATGHEREELEA+LEG+DILDI+HP+GPFGTK
Subjt:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK

A0A5A7T437 Cytochrome c oxidase subunit 5b-27.9e-3078.95Show/hide
Query:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
        K+LKSLPSSS   S  LG ISQA RL A+SH SPS +  LF RHYASDSAD+GLKKKVEDVMPIATGHEREELEA+LEG+DILDI+HPVGPFGTK
Subjt:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK

A0A6J1DL93 cytochrome c oxidase subunit 5b-2, mitochondrial-like8.2e-43100Show/hide
Query:  KALKSLPSSSPNPSLGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
        KALKSLPSSSPNPSLGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
Subjt:  KALKSLPSSSPNPSLGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK

A0A6J1GC81 cytochrome c oxidase subunit 5b-2, mitochondrial-like2.7e-3081.05Show/hide
Query:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
        KALKSLPSSS + S  LG ISQATRLAASS  S SPS  LF RHYASDSAD+GLKKK EDV+PI TGHEREELEA+LEGRDILDI+HPVGPFGTK
Subjt:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK

A0A6J1KBJ1 cytochrome c oxidase subunit 5b-2, mitochondrial-like5.2e-2980Show/hide
Query:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
        KALKSLPSSS   S  LG ISQATRLAASS  S S S  LF RHYASDSAD+GLKKK EDV+PI TGHEREELEA+LEGRDILDI+HPVGPFGTK
Subjt:  KALKSLPSSSPNPS--LGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK

SwissProt top hitse value%identityAlignment
Q9LW15 Cytochrome c oxidase subunit 5b-1, mitochondrial1.0e-1349.43Show/hide
Query:  SSSPNPSLGRISQATRL-AASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
        ++SP  S+   ++      A++ ++ S S+ +  R ++SDS ++   KKVEDVMPIATGHE+EELEA LEGR + DID P GPFGTK
Subjt:  SSSPNPSLGRISQATRL-AASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK

Q9SSB8 Cytochrome c oxidase subunit 5b-2, mitochondrial5.3e-1547.87Show/hide
Query:  KALKSLPSSSPNPSLGRISQATRLAASSHASPSPS-APLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
        K++ ++ S +       + ++T L+ S+ AS  P+ + +F R   S +AD+ +KK+VEDVMPIATGHE+EEL+A LEGR + DID P GPFGTK
Subjt:  KALKSLPSSSPNPSLGRISQATRLAASSHASPSPS-APLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK

Arabidopsis top hitse value%identityAlignment
AT1G80230.1 Rubredoxin-like superfamily protein3.8e-1647.87Show/hide
Query:  KALKSLPSSSPNPSLGRISQATRLAASSHASPSPS-APLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
        K++ ++ S +       + ++T L+ S+ AS  P+ + +F R   S +AD+ +KK+VEDVMPIATGHE+EEL+A LEGR + DID P GPFGTK
Subjt:  KALKSLPSSSPNPSLGRISQATRLAASSHASPSPS-APLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK

AT3G15640.1 Rubredoxin-like superfamily protein7.1e-1549.43Show/hide
Query:  SSSPNPSLGRISQATRL-AASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
        ++SP  S+   ++      A++ ++ S S+ +  R ++SDS ++   KKVEDVMPIATGHE+EELEA LEGR + DID P GPFGTK
Subjt:  SSSPNPSLGRISQATRL-AASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK

AT3G15640.2 Rubredoxin-like superfamily protein1.8e-1349.43Show/hide
Query:  SSSPNPSLGRISQATRL-AASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK
        ++SP  S+   ++      A++ ++ S S+ +  R ++SDS ++   KKVEDVMPIATGHE+EELEA LEGR + DID P GPFGTK
Subjt:  SSSPNPSLGRISQATRL-AASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGCCCTAAAATCTCTTCCCTCATCATCCCCCAACCCTTCCTTGGGACGCATTTCTCAAGCCACACGACTCGCTGCTTCATCTCACGCTTCTCCTTCCCCTTCTGCTCC
GCTCTTCCATCGCCATTACGCCTCTGATTCTGCTGATTCCGGTCTCAAGAAGAAGGTTGAGGATGTAATGCCAATTGCAACCGGTCACGAGCGCGAAGAGCTTGAAGCCG
CACTTGAGGGAAGAGATATCCTTGATATAGACCATCCCGTTGGTCCTTTTGGAACTAAGGTTAGTGTAATTTGTGGT
mRNA sequenceShow/hide mRNA sequence
AAAGCCCTAAAATCTCTTCCCTCATCATCCCCCAACCCTTCCTTGGGACGCATTTCTCAAGCCACACGACTCGCTGCTTCATCTCACGCTTCTCCTTCCCCTTCTGCTCC
GCTCTTCCATCGCCATTACGCCTCTGATTCTGCTGATTCCGGTCTCAAGAAGAAGGTTGAGGATGTAATGCCAATTGCAACCGGTCACGAGCGCGAAGAGCTTGAAGCCG
CACTTGAGGGAAGAGATATCCTTGATATAGACCATCCCGTTGGTCCTTTTGGAACTAAGGTTAGTGTAATTTGTGGT
Protein sequenceShow/hide protein sequence
KALKSLPSSSPNPSLGRISQATRLAASSHASPSPSAPLFHRHYASDSADSGLKKKVEDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTKVSVICG