; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013119 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013119
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein ROOT INITIATION DEFECTIVE 3-like
Genome locationscaffold459:353093..356736
RNA-Seq ExpressionMS013119
SyntenyMS013119
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0030174 - regulation of DNA-dependent DNA replication initiation (biological process)
GO:0005656 - nuclear pre-replicative complex (cellular component)
GO:0097344 - Rix1 complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR019775 - WD40 repeat, conserved site
IPR020472 - G-protein beta WD-40 repeat
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151059.1 protein ROOT INITIATION DEFECTIVE 3-like [Momordica charantia]1.6e-23186.02Show/hide
Query:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS
        MVLVVASSSIDSGIGCWDLHTGAEQLRYKS ASPSHGL+CVGQQFLACSQLRDPAATAGSILYWSWFK                         PQVEVKS
Subjt:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS

Query:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP
        FPAEA+MPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWH HYRAVTC+VFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP
Subjt:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP

Query:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY
        ITD+ VGYGGSN+IIISSSVDRTCKVWSLS GKLLR+IIFPSI+DAIALDPGEHVFYGGGRDGKIYTAALNAKS SSSDYGLHILGSLSNQSKSVTSLAY
Subjt:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY

Query:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSGEFMG-SS
        CASGNLLISGSEDG IKVWDT TNNIIRVLKHSKGPVNNI+IVRQ+++PK  INS+SQGSLRKHRSL+PP LAKFENSKDEDEDTG++IG+SGEFMG SS
Subjt:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSGEFMG-SS

Query:  PLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQTS
        PLTC VMENQIA+LQ+QG AATG+ELER+KRDYG+SMQMLQ WRKMYDNLH+FCVNEL+DG+Q +
Subjt:  PLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQTS

XP_022941447.1 protein ROOT INITIATION DEFECTIVE 3 [Cucurbita moschata]1.7e-22584.12Show/hide
Query:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS
        MVLVVASSS+DSGIGCWDLHTGAEQLRYKS ASP+HGLVCVG++FLACSQLRDPAAT+GS+LYWSWFK                         PQVEVKS
Subjt:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS

Query:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP
        FPAE +M LA+NNEGTYIVGGGFSGDIYLWEVLSGRLL KWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLL VFDDGWQRE+KHLYEHSFTGHNLP
Subjt:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP

Query:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY
        +TD+ +GYGGSNAIIISSSVDRTCKVWSLS GKLLR+IIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKS SSSDYGLHILGSLSNQSKSVTSLAY
Subjt:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY

Query:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG
        C+SGNLLISGSEDG IKVWDT TNNIIRVLKHSKGPVNN+LIVRQQLLP SQ+N TSQGSLRKHRSLLPP+LAKF NSKD+DEDTGVIIG SG   E MG
Subjt:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG

Query:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQT
         SP++ +VM+NQI ELQQQGSAATG+ELERLKRDYGKSMQM Q WRK+YDNLHQ+CVNELLDG+QT
Subjt:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQT

XP_022982251.1 protein ROOT INITIATION DEFECTIVE 3 [Cucurbita maxima]8.6e-22282.83Show/hide
Query:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS
        MVLVVASSS+DSGIGCWDLHTGAEQL YKS ASP+HGLVCVG++FLACSQLRDPAAT+GS+LYWSWFK                         PQVEVKS
Subjt:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS

Query:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP
        FPAE +M LA+NNEGTYIVGGGFSGDIYLWEVLSGRLL KWHAHYRAVTCL FSEDDSLLISGSEDGCVRVWSLL VFDDGWQRE+KHLYEHSFTGHNLP
Subjt:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP

Query:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY
        +TD+ +GYGGSNAIIISSSVDRTCKVWSLS GKLLR+IIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKS SSSDYGLHILGSLSNQSKSVTSLAY
Subjt:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY

Query:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG
        C+SGNLLISGSEDG IKVWDT TNNIIRVLKHSKGPVNN+LIV+ QLLP SQ+N TSQGSLRKHRSLLPP+LAKF NSKD+DEDTGVIIG SG   E MG
Subjt:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG

Query:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQT
         SP++ +VM++QI ELQQQGSAATG+ELERLKR+YGKSMQM Q WRK+YDNLHQ+CVNELLDG+QT
Subjt:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQT

XP_023521513.1 protein ROOT INITIATION DEFECTIVE 3 [Cucurbita pepo subsp. pepo]4.9e-22583.48Show/hide
Query:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS
        MVLVVASSS+DSGIGCWDLHTGAEQLRYKS ASP+HGLVCVG++FLACSQLRDPAAT+GS+LYWSWFK                         PQVEVKS
Subjt:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS

Query:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP
        FPAE +M LA+NNEGTYI+GGGFSGDIYLWEV+SGRLL KWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLL VFDDGWQRE+KHLYEHSFTGHNLP
Subjt:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP

Query:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY
        +TD+ +GYGGSNAII+SSSVDRTCKVWSLS GKLLR+IIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKS SSSDYGLHILGSLSNQSKSVTSLAY
Subjt:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY

Query:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG
        C+SGNLLISGSEDG IKVWDT TNNIIRVLKHSKGPVNN+LIVRQQLLP SQ+N TSQGSLRKHRSLLPP+LAKF NSKD+DEDTGVIIG SG   E MG
Subjt:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG

Query:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQT
         SP++ +VM+NQI ELQQQGSAATG+ELERLKRDYGKSMQM Q WRK+YDNLHQ+CVNELLDG+QT
Subjt:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQT

XP_038898957.1 protein ROOT INITIATION DEFECTIVE 3 [Benincasa hispida]1.8e-21982.26Show/hide
Query:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS
        MVLVVASSSIDSGIGCWDLHTGAEQLRYKS ASP+HGLVCVG++FLACSQLRDPAATAGS+LYWSW K                         PQVEVKS
Subjt:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS

Query:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP
        FPAE +M LA+N+EGTYIVGGG SGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGC+RVW+LLTVFDDGWQREAKHLYEHSFTGHNLP
Subjt:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP

Query:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY
        +TD+ VGYGGSNAIIISSSVDRTCKVWSLS GKLLR+IIFPSIID IALDPGEHVFYGGGRDGKIYTAALNAK  S+ DYGLHILGSLSNQSKSVT+LAY
Subjt:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY

Query:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG
        C+SGNLLISGSEDG I+VWDT TNN+IRV +HSKGPVNNIL+VRQQ+LPKSQ  STSQG LRKHRSLLPP+LAKFENSKDEDEDTGVIIG +G   E MG
Subjt:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG

Query:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQTSN
           L+ +VM+NQI ELQQQGSAA G+ELERLK D GKSMQMLQHWRKMYDNLHQFCVNELLDG+QT N
Subjt:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQTSN

TrEMBL top hitse value%identityAlignment
A0A0A0KZT0 WD_REPEATS_REGION domain-containing protein1.6e-21882.05Show/hide
Query:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS
        MVL+VASSSIDSGIGCWDLHTG+EQLRYKS ASP HGLVCVG++FLACSQLRDPAATAGS+LYWSW K                         PQVEVKS
Subjt:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS

Query:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP
        FPAE +M LA+N+EGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLL+SGSEDGC+RVWSL+TVFDDGWQREAKHLYEHSFTGHNLP
Subjt:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP

Query:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY
        +TD+ VGYGG NAIIISSSVDRTCKVWSLS GKLLR+IIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAK  SSSDYGLHILGS+SNQSKSVTSLAY
Subjt:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY

Query:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG
        C+SGNLLISGSEDG I+VWDT TNN+IRV +HSKGPVNNIL+V+QQ LPKSQ  STSQGSLRKHR LLPP+LAKFENSKDEDE TGVII  SG   E  G
Subjt:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG

Query:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQTSN
         S L+ +VM++QI ELQQQGSAATG+ELERLK DYGKS QMLQHWRKMYDNLHQFCVNELLDGNQT N
Subjt:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQTSN

A0A1S3BU36 protein ROOT INITIATION DEFECTIVE 31.8e-21782.26Show/hide
Query:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS
        MVL+VASSSIDSGIGCWDLHTGAEQLRYKS ASP HGLVCVG++FLACSQLRD AATAGS+LYWSW K                         PQVEVKS
Subjt:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS

Query:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP
        FPAE +M LA+NNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGC+RVWSL+TVFDDGWQREAKHLYEHSFTGHNLP
Subjt:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP

Query:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY
        +TD+ VGYGG NAIIISSSVDRTCKVWSLS GKLLR+IIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAK  SSSDYGLHILGSLSNQSKSVTSLAY
Subjt:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY

Query:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG
        C+SGNLLISG EDG I+VWDT TNN+IRV +HSKGPVNNIL+V+QQ LPKSQ  STSQGSLRKHR +LPP+LAKFENSKDEDE TGVII  SG   E M 
Subjt:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG

Query:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQTSN
         S L+ +VM+NQI ELQQQGSAAT +ELERLK DYGKS QMLQHWRKMYDNLHQFCVNELLDGNQT N
Subjt:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQTSN

A0A6J1DDG0 protein ROOT INITIATION DEFECTIVE 3-like7.6e-23286.02Show/hide
Query:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS
        MVLVVASSSIDSGIGCWDLHTGAEQLRYKS ASPSHGL+CVGQQFLACSQLRDPAATAGSILYWSWFK                         PQVEVKS
Subjt:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS

Query:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP
        FPAEA+MPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWH HYRAVTC+VFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP
Subjt:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP

Query:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY
        ITD+ VGYGGSN+IIISSSVDRTCKVWSLS GKLLR+IIFPSI+DAIALDPGEHVFYGGGRDGKIYTAALNAKS SSSDYGLHILGSLSNQSKSVTSLAY
Subjt:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY

Query:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSGEFMG-SS
        CASGNLLISGSEDG IKVWDT TNNIIRVLKHSKGPVNNI+IVRQ+++PK  INS+SQGSLRKHRSL+PP LAKFENSKDEDEDTG++IG+SGEFMG SS
Subjt:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSGEFMG-SS

Query:  PLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQTS
        PLTC VMENQIA+LQ+QG AATG+ELER+KRDYG+SMQMLQ WRKMYDNLH+FCVNEL+DG+Q +
Subjt:  PLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQTS

A0A6J1FMG7 protein ROOT INITIATION DEFECTIVE 38.1e-22684.12Show/hide
Query:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS
        MVLVVASSS+DSGIGCWDLHTGAEQLRYKS ASP+HGLVCVG++FLACSQLRDPAAT+GS+LYWSWFK                         PQVEVKS
Subjt:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS

Query:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP
        FPAE +M LA+NNEGTYIVGGGFSGDIYLWEVLSGRLL KWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLL VFDDGWQRE+KHLYEHSFTGHNLP
Subjt:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP

Query:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY
        +TD+ +GYGGSNAIIISSSVDRTCKVWSLS GKLLR+IIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKS SSSDYGLHILGSLSNQSKSVTSLAY
Subjt:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY

Query:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG
        C+SGNLLISGSEDG IKVWDT TNNIIRVLKHSKGPVNN+LIVRQQLLP SQ+N TSQGSLRKHRSLLPP+LAKF NSKD+DEDTGVIIG SG   E MG
Subjt:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG

Query:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQT
         SP++ +VM+NQI ELQQQGSAATG+ELERLKRDYGKSMQM Q WRK+YDNLHQ+CVNELLDG+QT
Subjt:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQT

A0A6J1IYT8 protein ROOT INITIATION DEFECTIVE 34.2e-22282.83Show/hide
Query:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS
        MVLVVASSS+DSGIGCWDLHTGAEQL YKS ASP+HGLVCVG++FLACSQLRDPAAT+GS+LYWSWFK                         PQVEVKS
Subjt:  MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS

Query:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP
        FPAE +M LA+NNEGTYIVGGGFSGDIYLWEVLSGRLL KWHAHYRAVTCL FSEDDSLLISGSEDGCVRVWSLL VFDDGWQRE+KHLYEHSFTGHNLP
Subjt:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP

Query:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY
        +TD+ +GYGGSNAIIISSSVDRTCKVWSLS GKLLR+IIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKS SSSDYGLHILGSLSNQSKSVTSLAY
Subjt:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAY

Query:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG
        C+SGNLLISGSEDG IKVWDT TNNIIRVLKHSKGPVNN+LIV+ QLLP SQ+N TSQGSLRKHRSLLPP+LAKF NSKD+DEDTGVIIG SG   E MG
Subjt:  CASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSG---EFMG

Query:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQT
         SP++ +VM++QI ELQQQGSAATG+ELERLKR+YGKSMQM Q WRK+YDNLHQ+CVNELLDG+QT
Subjt:  SSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNELLDGNQT

SwissProt top hitse value%identityAlignment
A0A1L8HX76 WD repeat-containing protein 181.0e-3928.88Show/hide
Query:  LVVASSSIDSGIGC--WDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS
        LV+++ +      C  W+  TG+  L Y+   +   GL  +G Q+L   QL       G      W                          + Q++ K 
Subjt:  LVVASSSIDSGIGC--WDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKS

Query:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP
             +  L+A+  G Y+V  G +  IYLWEV +G LL   ++HY+ VTCL F++D S +ISG++D  V VW L +V      R  +  Y   ++ H+LP
Subjt:  FPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLP

Query:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSL--SNQSKSVTSL
        ITDV  G GG  A + +SS+D+T K+W + +G LL  ++F   I ++A DP E+  + GG DG IY   L   +    +   H    +        VT L
Subjt:  ITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSL--SNQSKSVTSL

Query:  AYCASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKD-EDEDTGVIIGLSGEFMG
        +    G++LISGS D T+ VWD  +   +R + H +GPV N+ I+     P + + + S+ S       LP      + ++  E  ++G +I   G+  G
Subjt:  AYCASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKD-EDEDTGVIIGLSGEFMG

Query:  SSPLTCYVMENQIAEL--QQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQF
        S   T     +Q+  L  + +G   +G+ +E+L+    +  + L   RK+  +L  F
Subjt:  SSPLTCYVMENQIAEL--QQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQF

Q3SZD4 WD repeat-containing protein 183.6e-3731.7Show/hide
Query:  WDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQ--PQVEVKSFPAEAMMPLAANNE
        W+LH+GA  L Y+   +   GL  +  ++L  +QL                         K+ IC        + LQ   Q++ K      +  L  +  
Subjt:  WDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQ--PQVEVKSFPAEAMMPLAANNE

Query:  GTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDVAVGYGGSNAI
        G Y++  G S +IYLWEV +G LL     HY+ V+CL F+ D S  ISG +D  V  WSL +V      R       H ++ H LPITD+  G+GG  A 
Subjt:  GTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDVAVGYGGSNAI

Query:  IISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAAL------NAKSSSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLI
        + ++S+D+T K+W +S+G+LL  ++F   I A+ +D  EH  + GG DG I+   L        KS         +     NQ   VT L+    G++L+
Subjt:  IISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAAL------NAKSSSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLI

Query:  SGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINS
        SGS D T+++WD  +   +R +   KGPV N  I+   L P S ++S
Subjt:  SGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINS

Q499N3 WD repeat-containing protein 187.5e-3528.96Show/hide
Query:  MVLVVASSSIDSGIGC--WDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEV
        M +VV + S      C  W+LH+GA  L Y+   +   GL  +  ++L        AA  G     +W                          + Q++ 
Subjt:  MVLVVASSSIDSGIGC--WDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEV

Query:  KSFPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHN
        K      +  L     G Y++  G +  IYLWEV +G LL     HY+ V+CL F+ D S  +S  +D  V  WSL +V      R       H ++ H 
Subjt:  KSFPAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHN

Query:  LPITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAK---SSSSSDYGLHILGSLSNQSKSV
        LPITD+  G+GG  A + ++S+D+T K+W++S+G LL  ++F   I ++ +D  EH  + GG DG I+   L ++      S     +           V
Subjt:  LPITDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAK---SSSSSDYGLHILGSLSNQSKSV

Query:  TSLAYCASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSL
        T L+    G++L+SGS D ++++WD  +   +R +   KGPV N  I    L P S +N   + SL
Subjt:  TSLAYCASGNLLISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSL

Q9BV38 WD repeat-containing protein 182.7e-3731.07Show/hide
Query:  WDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKSFPAEAMMPLAANNEGT
        W+LH+GA  L Y+   +   GL  +  ++L  +QL       G     +W                          + Q++ K      +  L A+  G 
Subjt:  WDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKSFPAEAMMPLAANNEGT

Query:  YIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQR--EAKHLYEHSFTGHNLPITDVAVGYGGSNAI
        Y++  G +  I+LWEV +G LL     HY+ V+CL F+ D S  ISG +D  V VWSL +V      R    +H++ H    H LPITD+  G+GG  A 
Subjt:  YIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQR--EAKHLYEHSFTGHNLPITDVAVGYGGSNAI

Query:  IISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAAL-------NAKSSSSSDYGLHILGSLSNQSKSVTSLAYCASGNLL
        + +SS+D+T K+W +S+G+LL  ++F   I A+ +D  EH  + GG +G I+   L               D G    G        VT L+    G++L
Subjt:  IISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAAL-------NAKSSSSSDYGLHILGSLSNQSKSVTSLAYCASGNLL

Query:  ISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSL
        +SGS D T+++WD  +   IR +   KGPV N  I+   L P S ++S  + SL
Subjt:  ISGSEDGTIKVWDTSTNNIIRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSL

Q9M3B4 Protein ROOT INITIATION DEFECTIVE 33.0e-13253.25Show/hide
Query:  VLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKSF
        + V+ASSSID GIG WDL TG EQL++K  ASP+HGL  VG++FLA SQL     T+GSI YWSW K                         PQ EVKS+
Subjt:  VLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKSF

Query:  PAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPI
        P E +  LAANNEGTY+VGGG SGDIYLWEV +G+LLKKWH HYR+VTCLVFS DDSLL+SGS+DG +RVWSL+ +FDD  +++   LYEH+F  H + +
Subjt:  PAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPI

Query:  TDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAYC
        TD+ + YGG NA+IISSS DRTCKVWSLS GKLL++IIFPS+I+A+ALDPG  VFY G RD KIY  A+NA    +S+YG  +LGS+S + K++T LAYC
Subjt:  TDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAYC

Query:  ASGNLLISGSEDGTIKVWDTSTNNIIRVLKHS----KGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIG---LSGE
        A GNLLISGSEDG + VWD  +   +R L H+    KGPVNNI IVR+ ++  S   + +Q S +   +L+PP L K+E   ++  D  V +     S  
Subjt:  ASGNLLISGSEDGTIKVWDTSTNNIIRVLKHS----KGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIG---LSGE

Query:  FMGSSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNE
         + SS L+  +++ Q+ ELQQQGSAAT +E+ERLK +Y +S+QM + W+K Y+NL Q  + E
Subjt:  FMGSSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNE

Arabidopsis top hitse value%identityAlignment
AT1G18080.1 Transducin/WD40 repeat-like superfamily protein1.8e-1524.43Show/hide
Query:  NNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDVAVGYGGS
        +++G + + G + G++ LW++ +G   +++  H + V  + FS D+  ++S S D  +++W+ L         E K+       GH   ++ V       
Subjt:  NNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDVAVGYGGS

Query:  NAIIISSSVDRTCKVWSLSNGKLLRDII-FPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISG
           I+S+S D+T KVW+LSN KL   +      +  +A+ P   +   GG+DG +    L   +     Y L         +  + +L +  +   L + 
Subjt:  NAIIISSSVDRTCKVWSLSNGKLLRDII-FPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISG

Query:  SEDGTIKVWDTSTNNIIRVLK
        +E G IK+WD  + +I+  LK
Subjt:  SEDGTIKVWDTSTNNIIRVLK

AT2G47410.1 WD40/YVTN repeat-like-containing domain;Bromodomain7.5e-1429.81Show/hide
Query:  LKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDVAVGYGGSNAIIISSSVDRTCKVWSLSNG---KL
        +KK   H  AV C +F      +I+GS+D  V++WS+ T            L   S  GH   ITD+AV    +NA++ S+S D   +VW L +G    +
Subjt:  LKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDVAVGYGGSNAIIISSSVDRTCKVWSLSNG---KL

Query:  LRDIIFPSIIDAIALDPGEHVFY---GGGRDG--KIYTAALN-----AKSSSSSDYGLHILGSLSN--QSKSVTSLAYCASGNLLISGSEDGTIKVWDTS
        LR       + AIA  P +   Y       DG  +I+ A  +         S SD      GS SN  QS  +   AY A+G + ++GS D   +VW  S
Subjt:  LRDIIFPSIIDAIALDPGEHVFY---GGGRDG--KIYTAALN-----AKSSSSSDYGLHILGSLSN--QSKSVTSLAYCASGNLLISGSEDGTIKVWDTS

Query:  TNNI---------IRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENS
          N+         + VL+  +  VN +      + PKS   ST+        +L   S  KF+NS
Subjt:  TNNI---------IRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENS

AT2G47410.2 WD40/YVTN repeat-like-containing domain;Bromodomain7.5e-1429.81Show/hide
Query:  LKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDVAVGYGGSNAIIISSSVDRTCKVWSLSNG---KL
        +KK   H  AV C +F      +I+GS+D  V++WS+ T            L   S  GH   ITD+AV    +NA++ S+S D   +VW L +G    +
Subjt:  LKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDVAVGYGGSNAIIISSSVDRTCKVWSLSNG---KL

Query:  LRDIIFPSIIDAIALDPGEHVFY---GGGRDG--KIYTAALN-----AKSSSSSDYGLHILGSLSN--QSKSVTSLAYCASGNLLISGSEDGTIKVWDTS
        LR       + AIA  P +   Y       DG  +I+ A  +         S SD      GS SN  QS  +   AY A+G + ++GS D   +VW  S
Subjt:  LRDIIFPSIIDAIALDPGEHVFY---GGGRDG--KIYTAALN-----AKSSSSSDYGLHILGSLSN--QSKSVTSLAYCASGNLLISGSEDGTIKVWDTS

Query:  TNNI---------IRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENS
          N+         + VL+  +  VN +      + PKS   ST+        +L   S  KF+NS
Subjt:  TNNI---------IRVLKHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENS

AT3G49180.1 Transducin/WD40 repeat-like superfamily protein2.1e-13353.25Show/hide
Query:  VLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKSF
        + V+ASSSID GIG WDL TG EQL++K  ASP+HGL  VG++FLA SQL     T+GSI YWSW K                         PQ EVKS+
Subjt:  VLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKSF

Query:  PAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPI
        P E +  LAANNEGTY+VGGG SGDIYLWEV +G+LLKKWH HYR+VTCLVFS DDSLL+SGS+DG +RVWSL+ +FDD  +++   LYEH+F  H + +
Subjt:  PAEAMMPLAANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPI

Query:  TDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAYC
        TD+ + YGG NA+IISSS DRTCKVWSLS GKLL++IIFPS+I+A+ALDPG  VFY G RD KIY  A+NA    +S+YG  +LGS+S + K++T LAYC
Subjt:  TDVAVGYGGSNAIIISSSVDRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAYC

Query:  ASGNLLISGSEDGTIKVWDTSTNNIIRVLKHS----KGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIG---LSGE
        A GNLLISGSEDG + VWD  +   +R L H+    KGPVNNI IVR+ ++  S   + +Q S +   +L+PP L K+E   ++  D  V +     S  
Subjt:  ASGNLLISGSEDGTIKVWDTSTNNIIRVLKHS----KGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIG---LSGE

Query:  FMGSSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNE
         + SS L+  +++ Q+ ELQQQGSAAT +E+ERLK +Y +S+QM + W+K Y+NL Q  + E
Subjt:  FMGSSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQHWRKMYDNLHQFCVNE

AT3G49660.1 Transducin/WD40 repeat-like superfamily protein1.6e-1627.23Show/hide
Query:  NNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDVAVGYGGS
        N +   IV G F   + +W+V +G+ LK   AH   VT + F+ D SL++S S DG  R+W      D G      H  +      N P++ V     G 
Subjt:  NNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDVAVGYGGS

Query:  NAIIISSSVDRTCKVWSLSNGKLLRDIIFP-----SIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAYCASGNL
           I+  ++D T ++W++S+ K L+           I  A ++  G+ +   G  D  ++   LN+K          +L  L   +++V ++A   + NL
Subjt:  NAIIISSSVDRTCKVWSLSNGKLLRDIIFP-----SIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAYCASGNL

Query:  LISGSEDGTIKVW
        + SGS D T+++W
Subjt:  LISGSEDGTIKVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCTAGTGGTCGCTTCGTCCTCCATTGATTCTGGAATTGGTTGCTGGGACCTCCACACGGGTGCGGAACAACTACGTTACAAGTCTTCTGCTTCTCCTTCACATGG
TCTTGTGTGTGTTGGCCAACAGTTTCTCGCATGCTCTCAGCTCCGTGATCCCGCTGCCACTGCAGGCTCCATTCTCTACTGGTCTTGGTTTAAGGTACTTGTTATTGCAA
GTGTAATGAAATCAATCATCTGTTTGCCAATAGCGCGCTTGATTAATTATTCTCTGCAGCCTCAAGTAGAAGTTAAGAGCTTTCCGGCTGAAGCAATGATGCCCTTGGCT
GCCAACAATGAAGGTACCTATATAGTTGGTGGTGGTTTCTCTGGAGATATTTACTTGTGGGAGGTTTTGAGCGGTCGATTGCTTAAGAAATGGCATGCTCATTATAGGGC
AGTTACTTGCCTTGTATTCTCTGAAGACGACTCCCTGTTAATTTCCGGTTCTGAAGATGGCTGTGTTAGAGTTTGGTCCCTTCTAACGGTATTTGATGATGGGTGGCAAA
GGGAAGCAAAACATTTATATGAACATAGTTTCACTGGGCACAATCTACCTATTACTGATGTTGCTGTAGGTTATGGGGGATCCAATGCTATTATAATCTCTTCCTCCGTG
GATCGGACTTGTAAGGTGTGGAGCTTATCTAACGGGAAATTGTTAAGAGATATCATATTTCCTTCAATCATTGATGCAATTGCTCTGGATCCTGGTGAACATGTATTCTA
TGGTGGTGGTAGGGATGGAAAGATATACACTGCTGCACTCAATGCTAAAAGCTCATCTAGTAGTGATTATGGATTGCACATTCTCGGTTCATTATCAAATCAGAGCAAAT
CTGTTACTTCTTTGGCTTACTGCGCAAGTGGAAATTTGTTGATATCTGGATCTGAGGACGGAACAATCAAAGTTTGGGATACCAGTACGAATAATATTATTCGTGTTCTT
AAACATTCAAAAGGTCCCGTAAATAATATACTTATCGTTAGACAACAGCTCCTCCCTAAATCGCAGATAAATTCTACTTCCCAAGGTTCCTTGAGAAAGCATCGTTCGCT
ATTACCTCCCTCCCTTGCAAAATTTGAAAATTCGAAGGACGAGGATGAAGACACTGGTGTTATCATTGGTCTATCAGGAGAATTTATGGGTTCTTCCCCCCTTACTTGTT
ATGTGATGGAGAACCAAATCGCAGAACTTCAGCAACAGGGTTCTGCTGCCACGGGAATAGAGTTGGAAAGACTAAAGCGCGATTATGGAAAATCCATGCAAATGCTACAG
CACTGGAGAAAAATGTACGACAATTTACATCAATTTTGTGTAAATGAGCTTCTGGATGGCAATCAAACGTCAAAT
mRNA sequenceShow/hide mRNA sequence
ATGGTGCTAGTGGTCGCTTCGTCCTCCATTGATTCTGGAATTGGTTGCTGGGACCTCCACACGGGTGCGGAACAACTACGTTACAAGTCTTCTGCTTCTCCTTCACATGG
TCTTGTGTGTGTTGGCCAACAGTTTCTCGCATGCTCTCAGCTCCGTGATCCCGCTGCCACTGCAGGCTCCATTCTCTACTGGTCTTGGTTTAAGGTACTTGTTATTGCAA
GTGTAATGAAATCAATCATCTGTTTGCCAATAGCGCGCTTGATTAATTATTCTCTGCAGCCTCAAGTAGAAGTTAAGAGCTTTCCGGCTGAAGCAATGATGCCCTTGGCT
GCCAACAATGAAGGTACCTATATAGTTGGTGGTGGTTTCTCTGGAGATATTTACTTGTGGGAGGTTTTGAGCGGTCGATTGCTTAAGAAATGGCATGCTCATTATAGGGC
AGTTACTTGCCTTGTATTCTCTGAAGACGACTCCCTGTTAATTTCCGGTTCTGAAGATGGCTGTGTTAGAGTTTGGTCCCTTCTAACGGTATTTGATGATGGGTGGCAAA
GGGAAGCAAAACATTTATATGAACATAGTTTCACTGGGCACAATCTACCTATTACTGATGTTGCTGTAGGTTATGGGGGATCCAATGCTATTATAATCTCTTCCTCCGTG
GATCGGACTTGTAAGGTGTGGAGCTTATCTAACGGGAAATTGTTAAGAGATATCATATTTCCTTCAATCATTGATGCAATTGCTCTGGATCCTGGTGAACATGTATTCTA
TGGTGGTGGTAGGGATGGAAAGATATACACTGCTGCACTCAATGCTAAAAGCTCATCTAGTAGTGATTATGGATTGCACATTCTCGGTTCATTATCAAATCAGAGCAAAT
CTGTTACTTCTTTGGCTTACTGCGCAAGTGGAAATTTGTTGATATCTGGATCTGAGGACGGAACAATCAAAGTTTGGGATACCAGTACGAATAATATTATTCGTGTTCTT
AAACATTCAAAAGGTCCCGTAAATAATATACTTATCGTTAGACAACAGCTCCTCCCTAAATCGCAGATAAATTCTACTTCCCAAGGTTCCTTGAGAAAGCATCGTTCGCT
ATTACCTCCCTCCCTTGCAAAATTTGAAAATTCGAAGGACGAGGATGAAGACACTGGTGTTATCATTGGTCTATCAGGAGAATTTATGGGTTCTTCCCCCCTTACTTGTT
ATGTGATGGAGAACCAAATCGCAGAACTTCAGCAACAGGGTTCTGCTGCCACGGGAATAGAGTTGGAAAGACTAAAGCGCGATTATGGAAAATCCATGCAAATGCTACAG
CACTGGAGAAAAATGTACGACAATTTACATCAATTTTGTGTAAATGAGCTTCTGGATGGCAATCAAACGTCAAAT
Protein sequenceShow/hide protein sequence
MVLVVASSSIDSGIGCWDLHTGAEQLRYKSSASPSHGLVCVGQQFLACSQLRDPAATAGSILYWSWFKVLVIASVMKSIICLPIARLINYSLQPQVEVKSFPAEAMMPLA
ANNEGTYIVGGGFSGDIYLWEVLSGRLLKKWHAHYRAVTCLVFSEDDSLLISGSEDGCVRVWSLLTVFDDGWQREAKHLYEHSFTGHNLPITDVAVGYGGSNAIIISSSV
DRTCKVWSLSNGKLLRDIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKSSSSSDYGLHILGSLSNQSKSVTSLAYCASGNLLISGSEDGTIKVWDTSTNNIIRVL
KHSKGPVNNILIVRQQLLPKSQINSTSQGSLRKHRSLLPPSLAKFENSKDEDEDTGVIIGLSGEFMGSSPLTCYVMENQIAELQQQGSAATGIELERLKRDYGKSMQMLQ
HWRKMYDNLHQFCVNELLDGNQTSN