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MS013129 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013129
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDynein light chain
Genome locationscaffold459:413638..414022
RNA-Seq ExpressionMS013129
SyntenyMS013129
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0005085 - guanyl-nucleotide exchange factor activity (molecular function)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581892.1 Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3892.13Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        MLEGKALI DTDMP+KLQIQAMKAASEALDLYDV D KSIAAHIKKKFDDGHG+GWQCVVGSNFGSFFTHS+GTFIYFTLETLNFLIF+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

XP_004252346.1 dynein light chain LC6, flagellar outer arm [Solanum lycopersicum]4.3e-3585.39Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        MLEGKALI+DTDMPVK+QIQAM  AS+ALDLYDVLDCKSIAAHIKK+FD  +G GWQCVVGSNFG FFTH+KGTFIYFTLETLNFLIF+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

XP_012073370.1 dynein light chain 1, cytoplasmic [Jatropha curcas]4.3e-3585.39Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        MLEGKALI+DTDMPVK+QIQAM +AS+ALDLYDVLDCKSIAAHIKK+FD  +G GWQCVVGSNFG FFTH+KGTFIYFTLETLNFLIF+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

XP_022955724.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]2.5e-3892.13Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        MLEGKALI DTDMP+KLQIQAMKAASEALDLYDV D KSIAAHIKKKFDDGHG+GWQCVVGSNFGSFFTHS+GTFIYFTLETLNFLIF+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

XP_023529016.1 dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo]3.2e-3892.13Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        MLEGKALI DTDMP+KLQIQAMKAASEALDLYDV D KSIAAHIKKKFDDGHG+GWQCVVGSNFGSFFTHS+GTFIYFTLETLNFLIF+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

TrEMBL top hitse value%identityAlignment
A0A067KQK9 Dynein light chain2.1e-3585.39Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        MLEGKALI+DTDMPVK+QIQAM +AS+ALDLYDVLDCKSIAAHIKK+FD  +G GWQCVVGSNFG FFTH+KGTFIYFTLETLNFLIF+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

A0A0V0H7P4 Dynein light chain2.1e-3585.39Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        MLEGKALI+DTDMPVK+QIQAM  AS+ALDLYDVLDCKSIAAHIKK+FD  +G GWQCVVGSNFG FFTH+KGTFIYFTLETLNFLIF+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

A0A3Q7J9T8 Dynein light chain2.1e-3585.39Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        MLEGKALI+DTDMPVK+QIQAM  AS+ALDLYDVLDCKSIAAHIKK+FD  +G GWQCVVGSNFG FFTH+KGTFIYFTLETLNFLIF+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

A0A6J1GX40 Dynein light chain1.2e-3892.13Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        MLEGKALI DTDMP+KLQIQAMKAASEALDLYDV D KSIAAHIKKKFDDGHG+GWQCVVGSNFGSFFTHS+GTFIYFTLETLNFLIF+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

A0A6N2AMH1 Dynein light chain2.1e-3585.39Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        MLEGKALI+DTDMPVK+QIQAM  AS+ALDLYDVLDCKSIAAHIKK+FD  +G GWQCVVGSNFG FFTH+KGTFIYFTLETLNFLIF+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

SwissProt top hitse value%identityAlignment
P61273 Dynein light chain 1, cytoplasmic3.7e-1342.7Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK+FD  +   W C+VG NFGS+ TH    FIYF L  +  L+F+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

P61285 Dynein light chain 1, cytoplasmic3.7e-1342.7Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK+FD  +   W C+VG NFGS+ TH    FIYF L  +  L+F+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

P63167 Dynein light chain 1, cytoplasmic3.7e-1342.7Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK+FD  +   W C+VG NFGS+ TH    FIYF L  +  L+F+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

P63168 Dynein light chain 1, cytoplasmic3.7e-1342.7Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK+FD  +   W C+VG NFGS+ TH    FIYF L  +  L+F+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

P63169 Dynein light chain 1, cytoplasmic3.7e-1342.7Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK+FD  +   W C+VG NFGS+ TH    FIYF L  +  L+F+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

Arabidopsis top hitse value%identityAlignment
AT1G52240.1 RHO guanyl-nucleotide exchange factor 111.4e-2071.19Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCV
        MLEGKA+++D+DMPVK+Q+QAM  AS+ALDL+DV DCKSIA HIKK+FD+ +G GWQCV
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCV

AT1G52240.2 RHO guanyl-nucleotide exchange factor 117.1e-3676.4Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        MLEGKA+++D+DMPVK+Q+QAM  AS+ALDL+DV DCKSIA HIKK+FD+ +G GWQCVVGSNFG FFTHSKGTFIYF LETL FLIF+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

AT3G16120.1 Dynein light chain type 1 family protein1.1e-3374.16Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        MLEGKA +++TDMPVK+Q+QAMK AS++LDL+DV D  SIAAHIKK+FD+ +G GWQCVVG+NFG FFTHSKGTFIYF L TLNFLIF+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

AT4G27360.1 Dynein light chain type 1 family protein1.9e-2050.56Show/hide
Query:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR
        MLEGKA++ DTDM   ++  A+  AS+ALD +DV +   IA  IKK+FD  +G GWQC+VG++FGSF TH  G FI+F++ +L  L+F+
Subjt:  MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFR

AT5G20110.1 Dynein light chain type 1 family protein2.8e-1644.71Show/hide
Query:  DMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFRFRLRGAN
        DMP  +Q  A + A   LD  +    K +A ++KK+FD G+G  W C+VGS+FGSF THS G FIYF+++ L  L+F+ ++R A+
Subjt:  DMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFRFRLRGAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGAAGGGAAGGCTTTGATCGATGATACGGACATGCCAGTGAAGCTGCAGATCCAAGCCATGAAAGCTGCTTCTGAAGCTCTGGATCTGTACGATGTCTTGGACTG
TAAATCCATCGCTGCCCACATCAAGAAGAAGTTTGATGATGGGCATGGGGTGGGATGGCAATGTGTGGTGGGTTCAAATTTTGGGAGCTTCTTCACTCATTCTAAAGGAA
CTTTTATCTACTTCACTTTGGAGACTCTCAACTTTCTGATATTCAGATTCAGACTCAGAGGGGCTAAC
mRNA sequenceShow/hide mRNA sequence
ATGCTGGAAGGGAAGGCTTTGATCGATGATACGGACATGCCAGTGAAGCTGCAGATCCAAGCCATGAAAGCTGCTTCTGAAGCTCTGGATCTGTACGATGTCTTGGACTG
TAAATCCATCGCTGCCCACATCAAGAAGAAGTTTGATGATGGGCATGGGGTGGGATGGCAATGTGTGGTGGGTTCAAATTTTGGGAGCTTCTTCACTCATTCTAAAGGAA
CTTTTATCTACTTCACTTTGGAGACTCTCAACTTTCTGATATTCAGATTCAGACTCAGAGGGGCTAAC
Protein sequenceShow/hide protein sequence
MLEGKALIDDTDMPVKLQIQAMKAASEALDLYDVLDCKSIAAHIKKKFDDGHGVGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFRFRLRGAN