; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013159 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013159
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProfilin
Genome locationscaffold459:783514..785028
RNA-Seq ExpressionMS013159
SyntenyMS013159
Gene Ontology termsGO:0042989 - sequestering of actin monomers (biological process)
GO:0005856 - cytoskeleton (cellular component)
GO:0005938 - cell cortex (cellular component)
GO:0003785 - actin monomer binding (molecular function)
InterPro domainsIPR005455 - Profilin
IPR027310 - Profilin conserved site
IPR036140 - Profilin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149180.1 profilin [Cucumis sativus]1.4e-6592.37Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQSYIDDQLMYEVDGQHLKAAAI+GNDG+VWAQS+ FP++KPEE++AIMKDFDEPGSLAPTGLHLGG+KYMVIQGESGAVIRGKKGTSGITVKKTTQA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        LIFGLYDEPMTPGQCN+IVEKLGDYLIDQGL
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

XP_008447563.1 PREDICTED: profilin-like [Cucumis melo]1.1e-6592.37Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQSYIDDQLMYEVDGQHLKAAAI+GNDG+VWAQS+ FP++KPEE++AIMKDFDEPGSLAPTGLHLGG+KYMVIQGESGAVIRGKKGTSGITVKKTTQA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        LIFGLYDEPMTPGQCN+IVEKLGDYLIDQGL
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

XP_022153540.1 profilin-like [Momordica charantia]9.6e-70100Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

XP_022980486.1 profilin-like [Cucurbita maxima]9.3e-6590.84Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQSYIDDQLMYEVDGQHLKAAAIVGNDG+VWAQS++FP++KPEE++AIMKDFDEPG+LAPTGLHL G+KYMVIQGESGAVIRGKKGTSGITVKKT QA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        LIFGLYDEPMTPGQCNMIVEKLGDYLIDQG+
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

XP_038880043.1 profilin-like [Benincasa hispida]1.9e-6592.37Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQSYIDDQLMYEVDGQHLKAAAIVGNDG+VWAQS+ FP++KPEE++AIMKDFDEPGSLAPTGLHLGG+KYMVIQGESGAVIRGKKGTSGITVKKT QA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        LIFGLYDEPMTPGQCNMIVEKLGDYLIDQG+
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

TrEMBL top hitse value%identityAlignment
A0A0A0LBL9 Profilin7.0e-6692.37Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQSYIDDQLMYEVDGQHLKAAAI+GNDG+VWAQS+ FP++KPEE++AIMKDFDEPGSLAPTGLHLGG+KYMVIQGESGAVIRGKKGTSGITVKKTTQA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        LIFGLYDEPMTPGQCN+IVEKLGDYLIDQGL
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

A0A1S3BHQ2 Profilin5.3e-6692.37Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQSYIDDQLMYEVDGQHLKAAAI+GNDG+VWAQS+ FP++KPEE++AIMKDFDEPGSLAPTGLHLGG+KYMVIQGESGAVIRGKKGTSGITVKKTTQA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        LIFGLYDEPMTPGQCN+IVEKLGDYLIDQGL
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

A0A6J1DH42 Profilin4.7e-70100Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

A0A6J1GUQ5 Profilin5.9e-6590.84Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQSYIDDQLMYEVDGQHLKAAAIVGNDG+VWA+S++FP++KPEE++AIMKDFDEPGSLAPTGLHL G+KYMVIQGESGAVIRGKKGTSGITVKKT QA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        LIFGLYDEPMTPGQCNMIVEKLGDYLIDQG+
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

A0A6J1ITQ4 Profilin4.5e-6590.84Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQSYIDDQLMYEVDGQHLKAAAIVGNDG+VWAQS++FP++KPEE++AIMKDFDEPG+LAPTGLHL G+KYMVIQGESGAVIRGKKGTSGITVKKT QA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        LIFGLYDEPMTPGQCNMIVEKLGDYLIDQG+
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

SwissProt top hitse value%identityAlignment
A4GFC2 Profilin-45.5e-6079.39Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQ+Y+DD LM +++GQHL AAA++G+DG+VWAQSA FP+FKPEEV AI+KDFDEPGSLAPTGLHLGG KYMVIQGE GAVIRGKKG  GITVKKT QA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        LIFG+YDEP+TPGQCN+IVE+LGDYL++QGL
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

A4KA41 Profilin-51.9e-6080.15Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQ+Y+D+ LM E+DG HL AAAI+G+DG+VWAQS+ FP+FKPEE+ AI+KDFDEPGSLAPTGLHLGG KYMVIQGESGAVIRGKKG  GITVKKT+QA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        LIFG+YDEP+TPGQCNMIVE+LGDYL+ QGL
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

Q941H7 Profilin1.0e-6182.44Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQ+Y+DD LM E DGQHL AAAI+G+DG+VWAQSA+FP+FKP E+ AIMKDFDEPGSLAPTGLHLGG KYMVIQGE GAVIRGKKG  GITVKKTTQA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        LI G+YDEPMTPGQCNM+VE+LGDYL+DQGL
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

Q9XF38 Profilin1.7e-6180.15Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQ+Y+DD LM ++DG HL AAAI+G+DG+VWAQS+ FPKFKPEE+ AIMKDFDEPGSLAPTGLHLGG KYMVIQGE GAVIRGKKG+ G+TVKKT+QA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        L+FG+Y+EP+TPGQCNMIVE+LGDYLIDQGL
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

Q9XF40 Profilin-11.1e-6079.39Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQ+Y+DD+LM ++DG HL AAAI+G+DG+VWA S+ FPKFKPEE+ AIMKDFDEPGSLAPTGLHLGG KYMVIQGE GAVIRGKKG+ G+TVKKT QA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        L+FG+Y+EP+TPGQCNMIVE+LGDYLIDQGL
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

Arabidopsis top hitse value%identityAlignment
AT2G19760.1 profilin 11.2e-5471.76Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQSY+DD LM +V+G HL AAAI+G DG+VWAQSA FP+ KP+E++ I KDF+EPG LAPTGL LGG KYMVIQGE GAVIRGKKG  G+T+KKT QA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        L+FG YDEPMT GQCN++VE+LGDYLI+  L
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

AT2G19770.1 profilin 52.7e-5470.15Show/hide
Query:  MSWQSYIDDQLMYEV---DGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKT
        MSWQ+Y+D+ LM +V    G HL AAAI+G+DG+VWAQSA+FP+FKP+E+  IMKDFDEPG LAPTG+ L G KYMVIQGE  AVIRGKKG  GIT+KKT
Subjt:  MSWQSYIDDQLMYEV---DGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKT

Query:  TQALIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
         Q+++FGLY+EP+TPGQCNM+VE+LGDYLI+QGL
Subjt:  TQALIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

AT4G29340.1 profilin 41.8e-5370.15Show/hide
Query:  MSWQSYIDDQLMYEV---DGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKT
        MSWQ+Y+D+ LM +V    G HL AAAIVG+DG+VWAQSA+FP+FK +E + IMKDFDEPG LAPTGL + GAKYMVIQGE GAVIRGKKG  GIT+KKT
Subjt:  MSWQSYIDDQLMYEV---DGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKT

Query:  TQALIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
         Q+ +FG+Y+EP+TPGQCNM+VE+LGDYL++QGL
Subjt:  TQALIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

AT4G29350.1 profilin 21.0e-5370.99Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQSY+DD LM EV+G HL  AAI G DG+VWAQS+ FP+ KP E+  I KDF+E G LAPTGL LGG KYMV+QGE+GAVIRGKKG  G+T+KKTTQA
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        L+FG+YDEPMT GQCN++VE+LGDYLI+ GL
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

AT5G56600.1 profilin 35.7e-5269.47Show/hide
Query:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA
        MSWQ+Y+DD LM +V G  L AAAI+G DG+VWAQS +FP+ KPEE+  I  DF  PG+LAPTGL LGG KYMVIQGE  AVIRGKKG  G+T+KKTT A
Subjt:  MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQA

Query:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL
        L+FG+YDEPMTPGQCNM+VE LG+YLI+ GL
Subjt:  LIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGACGGCCAACATCTCAAAGCCGCTGCCATTGTCGGCAACGACGGTACTGTTTGGGCCCAGAGCGC
CGACTTCCCCAAGTTCAAGCCAGAAGAGGTTAATGCCATTATGAAGGATTTTGATGAGCCTGGATCCCTTGCCCCGACTGGGTTACACCTTGGTGGAGCGAAGTACATGG
TTATCCAGGGGGAATCTGGAGCTGTTATTCGTGGAAAGAAGGGCACTTCTGGGATCACTGTAAAGAAAACAACCCAGGCACTCATTTTTGGTTTATATGATGAACCTATG
ACTCCAGGACAATGCAACATGATCGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCCTG
mRNA sequenceShow/hide mRNA sequence
ATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGACGGCCAACATCTCAAAGCCGCTGCCATTGTCGGCAACGACGGTACTGTTTGGGCCCAGAGCGC
CGACTTCCCCAAGTTCAAGCCAGAAGAGGTTAATGCCATTATGAAGGATTTTGATGAGCCTGGATCCCTTGCCCCGACTGGGTTACACCTTGGTGGAGCGAAGTACATGG
TTATCCAGGGGGAATCTGGAGCTGTTATTCGTGGAAAGAAGGGCACTTCTGGGATCACTGTAAAGAAAACAACCCAGGCACTCATTTTTGGTTTATATGATGAACCTATG
ACTCCAGGACAATGCAACATGATCGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCCTG
Protein sequenceShow/hide protein sequence
MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSLAPTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPM
TPGQCNMIVEKLGDYLIDQGL