; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013192 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013192
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRNase III domain-containing protein
Genome locationscaffold459:1078409..1080400
RNA-Seq ExpressionMS013192
SyntenyMS013192
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR000999 - Ribonuclease III domain
IPR036389 - Ribonuclease III, endonuclease domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581854.1 hypothetical protein SDJN03_21856, partial [Cucurbita argyrosperma subsp. sororia]2.0e-11187.97Show/hide
Query:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK
        MLTLSATSTS+VASWDTQQRL+YNPNAPR P KKP +L++SPTSQ+TGNATL A N+R +QIVSDLLKRRSP   EG    VEP+GLYLG EQWLPNPPK
Subjt:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK

Query:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVG-SSKTRTKKRAGAAVYNRAS
        VQKPRSVFNAASLAY+GDCIYELYARRHFLFP LNIEEYNDRVMAVVRCEAQD+LLQKLLNDNFLTEAERDILRWGKNVG SSKTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVG-SSKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS
        SLETLIGYLYLNNVKRLDEIM+KLGFSTDSSLQLI EESNS
Subjt:  SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS

XP_022148084.1 uncharacterized protein LOC111016851 isoform X1 [Momordica charantia]6.2e-12698.33Show/hide
Query:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK
        MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGN TLAAPNVRPDQIVSDLLKRRSPSPIEGK   VEPEGLYLGCEQWLPNPPK
Subjt:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK

Query:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASS
        VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASS
Subjt:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS
        LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS

XP_022148085.1 uncharacterized protein LOC111016851 isoform X2 [Momordica charantia]1.8e-12598.33Show/hide
Query:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK
        MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGN TLAAPNVRPDQIVSDLLKRRSPSPIEGK   VEPEGLYLGCEQWLPNPPK
Subjt:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK

Query:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASS
        VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASS
Subjt:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN
        LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN

XP_038881983.1 uncharacterized protein LOC120073279 isoform X1 [Benincasa hispida]5.7e-11187.5Show/hide
Query:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK
        M+TLSATSTS+VASWDTQQRLSYNPNAP+ P KKP++L+LSPTSQ TGNATL A N+R +QIVSDLL RR+PS IEG   +VEP+GLYLG +QWLP+PPK
Subjt:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK

Query:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVG-SSKTRTKKRAGAAVYNRAS
        VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPL+IEEYNDRVMAVVRCEAQD+LLQKLL DNFLTE ERDILRWGKNVG SSKTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVG-SSKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN
        SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN
Subjt:  SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN

XP_038882062.1 uncharacterized protein LOC120073279 isoform X2 [Benincasa hispida]4.3e-11187.14Show/hide
Query:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK
        M+TLSATSTS+VASWDTQQRLSYNPNAP+ P KKP++L+LSPTSQ TGNATL A N+R +QIVSDLL RR+PS IEG   +VEP+GLYLG +QWLP+PPK
Subjt:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK

Query:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVG-SSKTRTKKRAGAAVYNRAS
        VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPL+IEEYNDRVMAVVRCEAQD+LLQKLL DNFLTE ERDILRWGKNVG SSKTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVG-SSKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS
        SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN+
Subjt:  SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS

TrEMBL top hitse value%identityAlignment
A0A0A0LDF2 RNase III domain-containing protein8.8e-11087.03Show/hide
Query:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK
        M+TLSATSTS+VASWDTQQRLSYNPNAPR P KKP + + SPTSQATGNA L A N+R +QIVSDLL RR+PS IEG   + EP+GLYLG +QWLP+PPK
Subjt:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK

Query:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVG-SSKTRTKKRAGAAVYNRAS
        VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPL+IEEYNDRVMAVVRCEAQD+LLQKLLNDNFLTEAERDILRWGKNVG SSKTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVG-SSKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEES
        SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQ+ISEES
Subjt:  SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEES

A0A1S3BIG3 uncharacterized protein LOC1034900181.0e-11087.55Show/hide
Query:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK
        M+TLSATSTS+VASWDTQQRLSYNPNAPR P KKP++L+ SPTSQ+TGNATL A N+R DQIVSDLL RR+ S IEG   + EP+GLYLG +QWLP+PPK
Subjt:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK

Query:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVG-SSKTRTKKRAGAAVYNRAS
        VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPL+IEEYNDRVMAVVRCEAQD+LLQKLLNDNFLT AERDILRWGKNVG SSKTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVG-SSKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS
        SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS
Subjt:  SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS

A0A6J1D1Y6 uncharacterized protein LOC111016851 isoform X28.8e-12698.33Show/hide
Query:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK
        MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGN TLAAPNVRPDQIVSDLLKRRSPSPIEGK   VEPEGLYLGCEQWLPNPPK
Subjt:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK

Query:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASS
        VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASS
Subjt:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN
        LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN

A0A6J1D2Y6 uncharacterized protein LOC111016851 isoform X13.0e-12698.33Show/hide
Query:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK
        MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGN TLAAPNVRPDQIVSDLLKRRSPSPIEGK   VEPEGLYLGCEQWLPNPPK
Subjt:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK

Query:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASS
        VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASS
Subjt:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS
        LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS

A0A6J1J002 uncharacterized protein LOC1114799936.1e-11187.19Show/hide
Query:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK
        MLTLSATSTS+VASWDTQQRL+YNPNAPR P KKP +L++SPTSQ+TG ATL A N+R +QIVSDLLKRRSP   EG    VEP+GLYLG EQWLPNPPK
Subjt:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK

Query:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVG-SSKTRTKKRAGAAVYNRAS
        VQKPRSVFNAASLAY+GDCIYELYARRHFLFP LNIEEYNDRVMAVVRCEAQD+LLQKLLNDNFLTEAERDILRWGKNVG SSKTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVG-SSKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSK
        SLETLIGYLYLNNVKRLDEIM+KLGFSTDSSLQLI EESNS+
Subjt:  SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSK

SwissProt top hitse value%identityAlignment
P74327 Mini-ribonuclease 31.5e-1842.74Show/hide
Query:  NPPKVQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYN
        NP      +S+ +  +LAY+GD ++ELY R  +LFPP  I +++ RV+A VR E Q  +L  LL    LT+ E++ +R G+N  +S   T +RA   +Y 
Subjt:  NPPKVQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYN

Query:  RASSLETLIGYLYLNNVKRLDEIM
         AS LETL+GYLYL + +RLDE++
Subjt:  RASSLETLIGYLYLNNVKRLDEIM

Q05370 Mini-ribonuclease 31.7e-1238.94Show/hide
Query:  ASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASSLETLIGYLYL
        ++LAY GD +YEL+ R  FL PP  I  Y+ +V+A VR E+Q   +  L      T AE  I R G+N  +      KR  A +Y +A+  E L+GYLYL
Subjt:  ASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASSLETLIGYLYL

Query:  NNVKRLDEIMQKL
         + +RL +++  L
Subjt:  NNVKRLDEIMQKL

Q5N0K8 Mini-ribonuclease 36.3e-1238.39Show/hide
Query:  SLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASSLETLIGYLYLN
        +LAY+GD +YE + R   L P     + +  V+  VR E Q  LL  LL    LT  E +I+R G+N      R  +R     Y +A+ LETL+GYLYL 
Subjt:  SLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASSLETLIGYLYLN

Query:  NVKRLDEIMQKL
        + +RL  ++Q+L
Subjt:  NVKRLDEIMQKL

Q81J58 Mini-ribonuclease 35.9e-1037.07Show/hide
Query:  NAASLAYIGDCIYELYARRHFLFP-PLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASSLETLIGY
        N+ +LAY+GD +YE Y R H L    +   + +    + V  +AQ  ++  LL   FLTE E  +LR G+N  S      K      Y  +++ E LIGY
Subjt:  NAASLAYIGDCIYELYARRHFLFP-PLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASSLETLIGY

Query:  LY-LNNVKRLDEIMQK
         + LNN +RLDEI+ K
Subjt:  LY-LNNVKRLDEIMQK

Q8DLQ0 Mini-ribonuclease 38.5e-1742.06Show/hide
Query:  PPKVQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNR
        PP +  P      A+LAY GD +YEL+ R  FL PP  I  Y+ +V+A VR E+Q   +  L    + TE ER I R G+N  +      KR  A +Y +
Subjt:  PPKVQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNR

Query:  ASSLETLIGYLYLNNVKRLDEIMQKL
        A+  E L+GYLYL N +RL EI Q L
Subjt:  ASSLETLIGYLYLNNVKRLDEIMQKL

Arabidopsis top hitse value%identityAlignment
AT1G55140.1 Ribonuclease III family protein1.5e-7260.16Show/hide
Query:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK
        M  LSA+ST V A+ DTQ +L YNPNAPR   K  +  +  P S  +     ++P       VSDLLKR +   I   F     +   +G E+W P+PPK
Subjt:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK

Query:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASS
        V+KPRSVFNAASLAYIGD IYE+YARRHFLFPPL+IEEYNDRV AVVRCEAQ  LLQKL++D+FLT+ ERDILRWGKNVGS KTR+ +RAG AVYN+ASS
Subjt:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQ-LISEESNSKYNYK
        LETLIGYLYL+N KRL+E+MQKLGFS+ SS + ++ E  ++K ++K
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQ-LISEESNSKYNYK

AT1G55140.2 Ribonuclease III family protein2.2e-4455.93Show/hide
Query:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK
        M  LSA+ST V A+ DTQ +L YNPNAPR   K  +  +  P S  +     ++P       VSDLLKR +   I   F     +   +G E+W P+PPK
Subjt:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPK

Query:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGK
        V+KPRSVFNAASLAYIGD IYE+YARRHFLFPPL+IEEYNDRV AVVRCEAQ  LLQKL++D+FLT+ ER I   G+
Subjt:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGK

AT3G13740.1 Ribonuclease III family protein1.0e-7360.82Show/hide
Query:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQ----IVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLP
        M+ LSA+ST V A+ DTQ RL YNPNAPR+  K P+           GN+ L  P+  P       V+DLLKR S      K + V+ +  Y+G E W P
Subjt:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQ----IVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLP

Query:  NPPKVQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYN
        +PPK++KPRSVFN ASLA+IGD IYELYARRHFLFPPL+IE+YNDRV AVVRCEAQ  LL KL++D+FLT+ ERDILRWGKN+GS++TRT++RAG AVYN
Subjt:  NPPKVQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYN

Query:  RASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSK
        +ASSLETLIGYLYL N KRL++IM+KLGFS+DSS +++ EE+N K
Subjt:  RASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSK

AT3G13740.2 Ribonuclease III family protein2.8e-6858.37Show/hide
Query:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQ----IVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLP
        M+ LSA+ST V A+ DTQ RL YNPNAPR+  K P+           GN+ L  P+  P       V+DLLKR S      K + V+ +  Y+G E W P
Subjt:  MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQ----IVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLP

Query:  NPPKVQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYN
        +PPK++KPRSVFN ASLA+IGD IYELYARRHFLFPPL+IE+YNDRV AV        LL KL++D+FLT+ ERDILRWGKN+GS++TRT++RAG AVYN
Subjt:  NPPKVQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYN

Query:  RASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSK
        +ASSLETLIGYLYL N KRL++IM+KLGFS+DSS +++ EE+N K
Subjt:  RASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAACTTTATCGGCGACTTCGACGAGCGTGGTGGCTTCGTGGGATACTCAGCAGAGGCTTTCGTATAATCCCAATGCCCCGAGAAGGCCCGGCAAGAAACCCAGTAC
TCTCGCTCTCTCGCCGACCTCCCAAGCCACCGGAAACGCTACCTTAGCTGCCCCAAATGTCCGGCCGGACCAAATTGTCTCCGACCTCCTCAAGCGTCGCAGTCCCAGCC
CAATTGAAGGTAAATTCATGGTGGTGGAGCCGGAGGGTCTCTATTTGGGATGTGAGCAGTGGTTGCCAAATCCACCTAAGGTTCAGAAACCTCGATCCGTGTTCAATGCA
GCATCATTAGCATATATTGGTGATTGCATCTACGAGCTATATGCTCGCAGGCACTTTCTGTTTCCTCCATTGAATATTGAAGAATACAATGACCGTGTGATGGCTGTCGT
TCGTTGTGAAGCACAGGATATTCTACTCCAGAAACTTCTTAATGATAATTTCTTAACAGAGGCAGAGAGGGACATCCTTCGCTGGGGAAAAAACGTTGGTTCCTCCAAAA
CACGTACAAAGAAGCGTGCTGGTGCAGCAGTTTATAATAGGGCGTCTTCTCTAGAAACTTTAATTGGTTACCTTTACCTGAACAATGTTAAACGGTTGGACGAAATCATG
CAAAAGCTCGGCTTCTCAACGGATTCATCCTTGCAATTGATTTCAGAGGAATCAAATAGTAAGTATAATTATAAGAAATACAACCCCCTTCCA
mRNA sequenceShow/hide mRNA sequence
ATGCTAACTTTATCGGCGACTTCGACGAGCGTGGTGGCTTCGTGGGATACTCAGCAGAGGCTTTCGTATAATCCCAATGCCCCGAGAAGGCCCGGCAAGAAACCCAGTAC
TCTCGCTCTCTCGCCGACCTCCCAAGCCACCGGAAACGCTACCTTAGCTGCCCCAAATGTCCGGCCGGACCAAATTGTCTCCGACCTCCTCAAGCGTCGCAGTCCCAGCC
CAATTGAAGGTAAATTCATGGTGGTGGAGCCGGAGGGTCTCTATTTGGGATGTGAGCAGTGGTTGCCAAATCCACCTAAGGTTCAGAAACCTCGATCCGTGTTCAATGCA
GCATCATTAGCATATATTGGTGATTGCATCTACGAGCTATATGCTCGCAGGCACTTTCTGTTTCCTCCATTGAATATTGAAGAATACAATGACCGTGTGATGGCTGTCGT
TCGTTGTGAAGCACAGGATATTCTACTCCAGAAACTTCTTAATGATAATTTCTTAACAGAGGCAGAGAGGGACATCCTTCGCTGGGGAAAAAACGTTGGTTCCTCCAAAA
CACGTACAAAGAAGCGTGCTGGTGCAGCAGTTTATAATAGGGCGTCTTCTCTAGAAACTTTAATTGGTTACCTTTACCTGAACAATGTTAAACGGTTGGACGAAATCATG
CAAAAGCTCGGCTTCTCAACGGATTCATCCTTGCAATTGATTTCAGAGGAATCAAATAGTAAGTATAATTATAAGAAATACAACCCCCTTCCA
Protein sequenceShow/hide protein sequence
MLTLSATSTSVVASWDTQQRLSYNPNAPRRPGKKPSTLALSPTSQATGNATLAAPNVRPDQIVSDLLKRRSPSPIEGKFMVVEPEGLYLGCEQWLPNPPKVQKPRSVFNA
ASLAYIGDCIYELYARRHFLFPPLNIEEYNDRVMAVVRCEAQDILLQKLLNDNFLTEAERDILRWGKNVGSSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIM
QKLGFSTDSSLQLISEESNSKYNYKKYNPLP