; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013198 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013198
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPectinesterase
Genome locationscaffold459:1134798..1135002
RNA-Seq ExpressionMS013198
SyntenyMS013198
Gene Ontology termsGO:0042545 - cell wall modification (biological process)
GO:0045490 - pectin catabolic process (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
GO:0045330 - aspartyl esterase activity (molecular function)
InterPro domainsIPR000070 - Pectinesterase, catalytic
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold
IPR018040 - Pectinesterase, Tyr active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150325.1 probable pectinesterase/pectinesterase inhibitor 44 [Momordica charantia]2.7e-2077.94Show/hide
Query:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRSN
        TVSLDG G+F R++DAIAAAPNF+TSRFYIH+K G Y EHVEVPAQK F+ LIG DASTTI+VDNRSN
Subjt:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRSN

XP_022150332.1 probable pectinesterase/pectinesterase inhibitor 39 [Momordica charantia]9.4e-2177.94Show/hide
Query:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRSN
        TVS DG+G+FVR+SDAIAAAPNF+T+RFYIH+K GIY+EHVEVP QK F+ LIG DASTTI+VDNRSN
Subjt:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRSN

XP_022151324.1 pectinesterase 2-like [Momordica charantia]9.4e-2180.6Show/hide
Query:  VSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRSN
        VSLDGTG+FVR+SDA AAAPNF T+RFYIHIK GIY+EHVEVP QK F+ LIG DASTTI+VDNRSN
Subjt:  VSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRSN

XP_023002625.1 probable pectinesterase/pectinesterase inhibitor 39 [Cucurbita maxima]1.8e-1976.12Show/hide
Query:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRS
        TVSLDGTG+FV+ISDAI AAPNF T+RFYIHIK GIY EH+E+P+QK F+ LIG +ASTTI+VDNRS
Subjt:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRS

XP_038889244.1 probable pectinesterase/pectinesterase inhibitor 39 [Benincasa hispida]1.8e-1975Show/hide
Query:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRSN
        TVSLDGTG+FV+++DAIAAAPNF+T+RFYIH+K GIY+E VEVP+QK F+ LIG DASTTI+V+NRSN
Subjt:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRSN

TrEMBL top hitse value%identityAlignment
A0A6J1D863 Pectinesterase1.3e-2077.94Show/hide
Query:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRSN
        TVSLDG G+F R++DAIAAAPNF+TSRFYIH+K G Y EHVEVPAQK F+ LIG DASTTI+VDNRSN
Subjt:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRSN

A0A6J1DAG5 Pectinesterase4.6e-2177.94Show/hide
Query:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRSN
        TVS DG+G+FVR+SDAIAAAPNF+T+RFYIH+K GIY+EHVEVP QK F+ LIG DASTTI+VDNRSN
Subjt:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRSN

A0A6J1DCN7 Pectinesterase4.6e-2180.6Show/hide
Query:  VSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRSN
        VSLDGTG+FVR+SDA AAAPNF T+RFYIHIK GIY+EHVEVP QK F+ LIG DASTTI+VDNRSN
Subjt:  VSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRSN

A0A6J1GIG0 Pectinesterase1.5e-1977.61Show/hide
Query:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRS
        TVSLDGTG+FV+ISDAI AAPNF T+RFYIHIK GIY EH+EVP QK F+ LIG +ASTTI+VDNRS
Subjt:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRS

A0A6J1KPG6 Pectinesterase8.6e-2076.12Show/hide
Query:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRS
        TVSLDGTG+FV+ISDAI AAPNF T+RFYIHIK GIY EH+E+P+QK F+ LIG +ASTTI+VDNRS
Subjt:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRS

SwissProt top hitse value%identityAlignment
O81415 Probable pectinesterase/pectinesterase inhibitor 397.8e-1046.27Show/hide
Query:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRS
        +V++DGTG+F  I+DA+ AAPN + +RF I+IK G Y E+VE+P +K  ++ IG     T++  NRS
Subjt:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRS

Q42534 Pectinesterase 23.0e-0944.78Show/hide
Query:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS
        TV+ DG+GDF  ++ A+AAAP  +  RF IHIK+G+YRE+VEV  +K  ++ +G     TI+  +R+
Subjt:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS

Q43062 Pectinesterase/pectinesterase inhibitor PPE8B5.0e-0942.42Show/hide
Query:  VSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS
        V+ DGTG+F  ++DA+ AAP+++  R+ I+IK G Y+E+VE+  +K+ +++IG     TI+  NRS
Subjt:  VSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS

Q9LXK7 Probable pectinesterase/pectinesterase inhibitor 325.4e-1143.94Show/hide
Query:  VSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS
        V+ DGTG+F  ISDA+ AAP+++T R+ IH+K G+Y E+VE+  +K+ ++++G     T++  NRS
Subjt:  VSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS

Q9SMY7 Probable pectinesterase/pectinesterase inhibitor 444.6e-1043.28Show/hide
Query:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS
        +V+LDGTG+F +I DAI  AP+++++RF I+IK G+Y E+VE+  +K+ ++++G     T++  NRS
Subjt:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS

Arabidopsis top hitse value%identityAlignment
AT1G53830.1 pectin methylesterase 22.1e-1044.78Show/hide
Query:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS
        TV+ DG+GDF  ++ A+AAAP  +  RF IHIK+G+YRE+VEV  +K  ++ +G     TI+  +R+
Subjt:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS

AT2G26440.1 Plant invertase/pectin methylesterase inhibitor superfamily1.8e-0940.91Show/hide
Query:  VSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS
        V+ DGTG+F  I++AI+ APN +  R  I++K G+Y E++++P  K  ++LIG  +  T +  NRS
Subjt:  VSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS

AT3G43270.1 Plant invertase/pectin methylesterase inhibitor superfamily3.8e-1243.94Show/hide
Query:  VSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS
        V+ DGTG+F  ISDA+ AAP+++T R+ IH+K G+Y E+VE+  +K+ ++++G     T++  NRS
Subjt:  VSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS

AT4G02300.1 Plant invertase/pectin methylesterase inhibitor superfamily5.5e-1146.27Show/hide
Query:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRS
        +V++DGTG+F  I+DA+ AAPN + +RF I+IK G Y E+VE+P +K  ++ IG     T++  NRS
Subjt:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQK-FVLLIGVDASTTIVVDNRS

AT4G33220.1 pectin methylesterase 443.2e-1143.28Show/hide
Query:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS
        +V+LDGTG+F +I DAI  AP+++++RF I+IK G+Y E+VE+  +K+ ++++G     T++  NRS
Subjt:  TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKF-VLLIGVDASTTIVVDNRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACTGTGTCGTTAGATGGTACCGGAGATTTTGTCCGAATTAGCGATGCTATAGCTGCGGCACCCAACTTCAATACGAGTAGATTTTACATTCATATCAAATCTGGGATCTA
CAGAGAACATGTCGAAGTTCCGGCGCAAAAATTTGTATTGTTGATTGGAGTCGATGCTTCTACCACTATTGTTGTCGATAATCGAAGCAAT
mRNA sequenceShow/hide mRNA sequence
ACTGTGTCGTTAGATGGTACCGGAGATTTTGTCCGAATTAGCGATGCTATAGCTGCGGCACCCAACTTCAATACGAGTAGATTTTACATTCATATCAAATCTGGGATCTA
CAGAGAACATGTCGAAGTTCCGGCGCAAAAATTTGTATTGTTGATTGGAGTCGATGCTTCTACCACTATTGTTGTCGATAATCGAAGCAAT
Protein sequenceShow/hide protein sequence
TVSLDGTGDFVRISDAIAAAPNFNTSRFYIHIKSGIYREHVEVPAQKFVLLIGVDASTTIVVDNRSN