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MS013199 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013199
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPectinesterase
Genome locationscaffold459:1143054..1143191
RNA-Seq ExpressionMS013199
SyntenyMS013199
Gene Ontology termsGO:0006812 - cation transport (biological process)
GO:0042545 - cell wall modification (biological process)
GO:0045490 - pectin catabolic process (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
GO:0045330 - aspartyl esterase activity (molecular function)
InterPro domainsIPR000070 - Pectinesterase, catalytic
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010088218.2 probable pectinesterase 56 [Morus notabilis]8.5e-0552.63Show/hide
Query:  DDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
        DD+V+P+GW EW G ++  L+Y EY+  GLG DTS++V
Subjt:  DDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
XP_022148123.1 probable pectinesterase/pectinesterase inhibitor 39 [Momordica charantia]5.9e-0658.54Show/hide
Query:  WVDDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQVK
        ++DD+VEP GW EW  T + +LFY EYN  G G DTSQ+VK
Subjt:  WVDDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQVK
XP_022150325.1 probable pectinesterase/pectinesterase inhibitor 44 [Momordica charantia]2.9e-0552.5Show/hide
Query:  WVDDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
        ++DDVV+P+GW+EW GT +++LFY EY   G G +TS +V
Subjt:  WVDDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
XP_022150332.1 probable pectinesterase/pectinesterase inhibitor 39 [Momordica charantia]2.2e-0555Show/hide
Query:  WVDDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
        ++D VV+P+GW+EW G  +++LFY EYN  G G DTSQ+V
Subjt:  WVDDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
XP_038889244.1 probable pectinesterase/pectinesterase inhibitor 39 [Benincasa hispida]1.3e-0555Show/hide
Query:  WVDDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
        ++DDVV+P+GW+EW G   ++LFY EYN  G G +TSQ+V
Subjt:  WVDDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
TrEMBL top hitse value%identityAlignment
A0A6J1D381 Pectinesterase2.8e-0658.54Show/hide
Query:  WVDDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQVK
        ++DD+VEP GW EW  T + +LFY EYN  G G DTSQ+VK
Subjt:  WVDDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQVK
A0A6J1D863 Pectinesterase1.4e-0552.5Show/hide
Query:  WVDDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
        ++DDVV+P+GW+EW GT +++LFY EY   G G +TS +V
Subjt:  WVDDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
A0A6J1DAG5 Pectinesterase1.1e-0555Show/hide
Query:  WVDDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
        ++D VV+P+GW+EW G  +++LFY EYN  G G DTSQ+V
Subjt:  WVDDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
W9R0V2 Pectinesterase7.0e-0552.63Show/hide
Query:  DDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
        DD+V+P+GW EW G  +  L+Y EY+  GLG DTS++V
Subjt:  DDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
W9R0V6 Pectinesterase4.1e-0552.63Show/hide
Query:  DDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
        DD+V+P+GW EW G ++  L+Y EY+  GLG DTS++V
Subjt:  DDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQV
SwissProt top hitse value%identityAlignment
Q84R10 Probable pectinesterase/pectinesterase inhibitor 362.6e-0442.5Show/hide
Query:  VDDVVEPRGWMEWSGT-TISMLFYVEYNKMGLGVDTSQQV
        +D++++PRGW EWSG+  +S L+Y E+   G G  T ++V
Subjt:  VDDVVEPRGWMEWSGT-TISMLFYVEYNKMGLGVDTSQQV
Q8RXK7 Probable pectinesterase/pectinesterase inhibitor 413.0e-0548.78Show/hide
Query:  WVDDVVEPRGWMEWSGT-TISMLFYVEYNKMGLGVDTSQQV
        ++D+VVEP GW EW+G   +S L+Y EYN  G G  T+ +V
Subjt:  WVDDVVEPRGWMEWSGT-TISMLFYVEYNKMGLGVDTSQQV
Q94CB1 Probable pectinesterase/pectinesterase inhibitor 255.2e-0540.48Show/hide
Query:  WVDDVVEPRGWMEWSGTT-ISMLFYVEYNKMGLGVDTSQQVK
        ++ D+V+P GW+EW+GT  +  ++Y EY+  G G +T+Q+V+
Subjt:  WVDDVVEPRGWMEWSGTT-ISMLFYVEYNKMGLGVDTSQQVK
Q9FF77 Probable pectinesterase/pectinesterase inhibitor 471.0e-0547.62Show/hide
Query:  WVDDVVEPRGWMEWSGTT-ISMLFYVEYNKMGLGVDTSQQVK
        ++ DVV+P GW+EW+GTT +  + Y EY+  G G DTS++V+
Subjt:  WVDDVVEPRGWMEWSGTT-ISMLFYVEYNKMGLGVDTSQQVK
Q9FJ21 Probable pectinesterase/pectinesterase inhibitor 582.6e-0441.46Show/hide
Query:  VDDVVEPRGWMEWSGT-TISMLFYVEYNKMGLGVDTSQQVK
        +DDV++P GW+ W+G   ++ L+Y EY   G G + +Q+VK
Subjt:  VDDVVEPRGWMEWSGT-TISMLFYVEYNKMGLGVDTSQQVK
Arabidopsis top hitse value%identityAlignment
AT3G10720.1 Plant invertase/pectin methylesterase inhibitor superfamily3.7e-0640.48Show/hide
Query:  WVDDVVEPRGWMEWSGTT-ISMLFYVEYNKMGLGVDTSQQVK
        ++ D+V+P GW+EW+GT  +  ++Y EY+  G G +T+Q+V+
Subjt:  WVDDVVEPRGWMEWSGTT-ISMLFYVEYNKMGLGVDTSQQVK
AT3G10720.2 Plant invertase/pectin methylesterase inhibitor superfamily3.7e-0640.48Show/hide
Query:  WVDDVVEPRGWMEWSGTT-ISMLFYVEYNKMGLGVDTSQQVK
        ++ D+V+P GW+EW+GT  +  ++Y EY+  G G +T+Q+V+
Subjt:  WVDDVVEPRGWMEWSGTT-ISMLFYVEYNKMGLGVDTSQQVK
AT3G60730.1 Plant invertase/pectin methylesterase inhibitor superfamily1.8e-0542.5Show/hide
Query:  VDDVVEPRGWMEWSGT-TISMLFYVEYNKMGLGVDTSQQV
        +D++++PRGW EWSG+  +S L+Y E+   G G  T ++V
Subjt:  VDDVVEPRGWMEWSGT-TISMLFYVEYNKMGLGVDTSQQV
AT4G02330.1 Plant invertase/pectin methylesterase inhibitor superfamily2.2e-0648.78Show/hide
Query:  WVDDVVEPRGWMEWSGT-TISMLFYVEYNKMGLGVDTSQQV
        ++D+VVEP GW EW+G   +S L+Y EYN  G G  T+ +V
Subjt:  WVDDVVEPRGWMEWSGT-TISMLFYVEYNKMGLGVDTSQQV
AT5G04970.1 Plant invertase/pectin methylesterase inhibitor superfamily7.4e-0747.62Show/hide
Query:  WVDDVVEPRGWMEWSGTT-ISMLFYVEYNKMGLGVDTSQQVK
        ++ DVV+P GW+EW+GTT +  + Y EY+  G G DTS++V+
Subjt:  WVDDVVEPRGWMEWSGTT-ISMLFYVEYNKMGLGVDTSQQVK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCTACTTGTTGGGTCGATGATGTAGTTGAACCAAGAGGGTGGATGGAATGGTCAGGGACAACGATAAGCATGCTGTTTTATGTCGAATACAACAAAATGGGTTT
GGGAGTTGACACTTCTCAACAAGTGAAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCTACTTGTTGGGTCGATGATGTAGTTGAACCAAGAGGGTGGATGGAATGGTCAGGGACAACGATAAGCATGCTGTTTTATGTCGAATACAACAAAATGGGTTT
GGGAGTTGACACTTCTCAACAAGTGAAA
Protein sequenceShow/hide protein sequence
MISTCWVDDVVEPRGWMEWSGTTISMLFYVEYNKMGLGVDTSQQVK