; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013207 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013207
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold459:1199924..1201075
RNA-Seq ExpressionMS013207
SyntenyMS013207
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063383.1 uncharacterized protein E6C27_scaffold508G00110 [Cucumis melo var. makuwa]9.0e-8588.95Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP
        MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNH+KQPLRWHQTEVCDSKAGADLLDIILKK             GSEQSS HVASSPP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP

Query:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        F+SGSPPSRASNPLIQDARFGDEKLS MPAL PAYSPSGLSSPS  S+SSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

XP_008461589.1 PREDICTED: uncharacterized protein LOC103500158 [Cucumis melo]2.6e-8488.42Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP
        MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNH+KQPLRWHQTEVCDSKAGADLLDIILKK             GSEQSS HVASSPP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP

Query:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        F+SGSPPSRASNPLIQDARFGDEKLS MP L PAYSPSGLSSPS  S+SSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

XP_011651371.1 uncharacterized protein LOC101218020 [Cucumis sativus]1.5e-8488.42Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP
        MNHFIVQQNTF+SCEETRGFASISDLKDPVVCPKPRRLAILANNH+KQPLRWHQTEVCDSKAGADLLDIILKK             GSEQSS HVASSPP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP

Query:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        F+SGSPPSRASNPLIQDARFGDEKLS MPAL PAYSPSGLSSPS  S+SSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

XP_022148186.1 uncharacterized protein LOC111016920 [Momordica charantia]1.3e-9193.16Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP
        MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKK             GSEQSSGHVASSPP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP

Query:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

XP_038897455.1 uncharacterized protein LOC120085511 [Benincasa hispida]6.5e-8387.37Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP
        MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNH+KQPLRW Q EVCDSKAGADLLDIILKK             GSEQ SGHVASSPP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP

Query:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        F+SGSPPSRASNPLIQDARFGDEKLS MPAL PAYSPSGLSSPS  S+SS HKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

TrEMBL top hitse value%identityAlignment
A0A0A0L9U7 Uncharacterized protein7.4e-8588.42Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP
        MNHFIVQQNTF+SCEETRGFASISDLKDPVVCPKPRRLAILANNH+KQPLRWHQTEVCDSKAGADLLDIILKK             GSEQSS HVASSPP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP

Query:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        F+SGSPPSRASNPLIQDARFGDEKLS MPAL PAYSPSGLSSPS  S+SSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

A0A1S3CF27 uncharacterized protein LOC1035001581.3e-8488.42Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP
        MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNH+KQPLRWHQTEVCDSKAGADLLDIILKK             GSEQSS HVASSPP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP

Query:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        F+SGSPPSRASNPLIQDARFGDEKLS MP L PAYSPSGLSSPS  S+SSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

A0A5A7V5L2 Uncharacterized protein4.4e-8588.95Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP
        MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNH+KQPLRWHQTEVCDSKAGADLLDIILKK             GSEQSS HVASSPP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP

Query:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        F+SGSPPSRASNPLIQDARFGDEKLS MPAL PAYSPSGLSSPS  S+SSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

A0A6J1D4M2 uncharacterized protein LOC1110169206.3e-9293.16Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP
        MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKK             GSEQSSGHVASSPP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP

Query:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

A0A6J1F3X6 uncharacterized protein LOC1114421608.8e-7882.11Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP
        MNH+IV+QNTFIS EET+GFASISDLKDP+VCPKPRRLAILANNH+KQPLRWHQTE CDSKAGADLLDIILKK             GSEQSS HVASSPP
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP

Query:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        ++SGSPPSRASNPLIQD RFGDE++S M AL PAYSPSGLSSPSS SS    KGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
Subjt:  FYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein5.9e-2641.97Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRW---HQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVAS
        MN   +QQN F   EE R  A++SD +D V+CPKPRR+  L N+H  + LRW   HQ E+C+S +G+++LD IL K             G EQ       
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRW---HQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVAS

Query:  SPP-FYSGSPPSRASNPLIQDARFGDEKL---STMPALPPAYSPSGLSSPSSTSSSSAHKGGGC--ARMKFGLKPAAVRVEGFDCLSRDRQNS
        +PP F++GSPPSR SNPL +D+ F +E L   S  P+ P A  P   SSP         + G C  A   FG  P  VRV GFDC   DR++S
Subjt:  SPP-FYSGSPPSRASNPLIQDARFGDEKL---STMPALPPAYSPSGLSSPSSTSSSSAHKGGGC--ARMKFGLKPAAVRVEGFDCLSRDRQNS

AT1G13390.2 unknown protein5.9e-2641.97Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRW---HQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVAS
        MN   +QQN F   EE R  A++SD +D V+CPKPRR+  L N+H  + LRW   HQ E+C+S +G+++LD IL K             G EQ       
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRW---HQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVAS

Query:  SPP-FYSGSPPSRASNPLIQDARFGDEKL---STMPALPPAYSPSGLSSPSSTSSSSAHKGGGC--ARMKFGLKPAAVRVEGFDCLSRDRQNS
        +PP F++GSPPSR SNPL +D+ F +E L   S  P+ P A  P   SSP         + G C  A   FG  P  VRV GFDC   DR++S
Subjt:  SPP-FYSGSPPSRASNPLIQDARFGDEKL---STMPALPPAYSPSGLSSPSSTSSSSAHKGGGC--ARMKFGLKPAAVRVEGFDCLSRDRQNS

AT1G68490.1 unknown protein1.7e-3347.98Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDL---KDPVVCPKPRRLAILAN-NHVKQPLRW---HQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSG
        MNHF VQ N F +  + R  +S+S +   +  VVCPKPRR+ +  N +H  + LR    HQ E+C+SKA  D+LDIIL K             G+EQ + 
Subjt:  MNHFIVQQNTFISCEETRGFASISDL---KDPVVCPKPRRLAILAN-NHVKQPLRW---HQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSG

Query:  HVASSP-PFYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
         V  SP PF  GSPPSR +NPL QDARF DE +S    +PP     GL   SS SSSS  KGG   R  FG  P  VRVEGFDCL RD +N  IPA+A
Subjt:  HVASSP-PFYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

AT3G02555.1 unknown protein3.2e-4052.28Show/hide
Query:  MNHFIVQQNTFISCEETRGFASI-SDLKDPVVCPKPRRLAILANNHVKQPLRWH-----QTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGH
        MNH  +QQN F+S EE+RGF  I S   D VVCPKPRR      N+V +P R H       +VCDSKAG DLLDI  +K S  S                
Subjt:  MNHFIVQQNTFISCEETRGFASI-SDLKDPVVCPKPRRLAILANNHVKQPLRWH-----QTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGH

Query:  VASSPPFYSGSPPSRASNPLIQDARFGDEKLSTM-PALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
           SPPF+ GSPPSRA+NPL QDARFGDEKL+T+ P+L P         PS++   S     GC RMKFG+KPA VRVEGFDCL+RDR NS IPA+A
Subjt:  VASSPPFYSGSPPSRASNPLIQDARFGDEKLSTM-PALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

AT5G16110.1 unknown protein2.0e-4555.56Show/hide
Query:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQT----EVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVA
        MNH  +QQN F+S EE  GF    D KD VVCPKPRR+ +LANN V +PLR H +    ++CDSKAGA+LL+II +K  + +   L            ++
Subjt:  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQT----EVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVA

Query:  SSPPFYSGSPPSRASNPLIQDARFGDEKLSTM----PALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA
        SSPP++ GSPPSRA+NPL QDARF DEKL+ +    P L P YS +G  SPSS+SSSS+ +  GC RMKFGL   AVRVEGFDCL+RDRQNS IPA+A
Subjt:  SSPPFYSGSPPSRASNPLIQDARFGDEKLSTM----PALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCATTTTATTGTTCAGCAGAACACCTTTATCTCATGTGAAGAGACAAGGGGCTTTGCCTCGATCTCTGATCTGAAGGACCCAGTTGTCTGTCCAAAGCCCAGGCG
ACTCGCGATTCTTGCCAACAATCATGTTAAGCAGCCCTTAAGATGGCACCAAACTGAGGTTTGTGATTCAAAAGCTGGGGCAGATCTCCTTGACATCATTTTAAAGAAGG
CAAGTTCTTTCTCATTCCTCATATTGTTTTGGCCATTAGGGTCGGAACAATCTAGCGGCCATGTAGCTTCGTCACCCCCATTTTATAGTGGGTCTCCGCCGAGCCGAGCT
TCAAACCCATTAATCCAGGATGCCCGGTTCGGGGATGAGAAACTGAGTACTATGCCAGCATTGCCCCCGGCATATTCCCCGTCAGGTCTCTCATCCCCATCCTCGACATC
ATCATCATCAGCCCACAAGGGAGGAGGGTGTGCGAGGATGAAGTTCGGCCTAAAACCGGCTGCAGTTAGAGTAGAAGGATTCGATTGTCTTAGTAGGGACCGCCAGAATT
CTAGGATCCCTGCAGTTGCT
mRNA sequenceShow/hide mRNA sequence
ATGAATCATTTTATTGTTCAGCAGAACACCTTTATCTCATGTGAAGAGACAAGGGGCTTTGCCTCGATCTCTGATCTGAAGGACCCAGTTGTCTGTCCAAAGCCCAGGCG
ACTCGCGATTCTTGCCAACAATCATGTTAAGCAGCCCTTAAGATGGCACCAAACTGAGGTTTGTGATTCAAAAGCTGGGGCAGATCTCCTTGACATCATTTTAAAGAAGG
CAAGTTCTTTCTCATTCCTCATATTGTTTTGGCCATTAGGGTCGGAACAATCTAGCGGCCATGTAGCTTCGTCACCCCCATTTTATAGTGGGTCTCCGCCGAGCCGAGCT
TCAAACCCATTAATCCAGGATGCCCGGTTCGGGGATGAGAAACTGAGTACTATGCCAGCATTGCCCCCGGCATATTCCCCGTCAGGTCTCTCATCCCCATCCTCGACATC
ATCATCATCAGCCCACAAGGGAGGAGGGTGTGCGAGGATGAAGTTCGGCCTAAAACCGGCTGCAGTTAGAGTAGAAGGATTCGATTGTCTTAGTAGGGACCGCCAGAATT
CTAGGATCCCTGCAGTTGCT
Protein sequenceShow/hide protein sequence
MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPPFYSGSPPSRA
SNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA