CuGenDBv2

Gene ID	MS013208
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein ABA DEFICIENT 4, chloroplastic
Genome location	scaffold459:1208140..1210114
RNA-Seq Expression	MS013208
Synteny	MS013208
Gene Ontology terms	GO:0009688 - abscisic acid biosynthetic process (biological process) GO:0016122 - xanthophyll metabolic process (biological process) GO:0032928 - regulation of superoxide anion generation (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR025461 - ABA DEFICIENT 4-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6581180.1 Protein ABA DEFICIENT 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-104

87.72

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Query:  QITKPCCDVRIGQRSSISTRSHKPN---LSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMV
        +ITKPCCDVR+GQRSSISTRS++P+   LSV+ LTADV SR WSFITGSRI +KPKLA VDLSKK   GVHASWLANAQ+ASNAFTLGT+AVLPFYGLMV
Subjt:  QITKPCCDVRIGQRSSISTRSHKPN---LSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMV

Query:  LAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLC
        LAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPEL G+ KMFSSEMTLASAWIHLLVVDLFAARQVFHDG+ENQIETRHSVS+C
Subjt:  LAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLC

Query:  LFFCPIGVLIHVITKALTTRAGPAKHGT
        LFFCPIGVLIHVITKALT R GPAK GT
Subjt:  LFFCPIGVLIHVITKALTTRAGPAKHGT

XP_008461596.1 PREDICTED: protein ABA DEFICIENT 4, chloroplastic isoform X2 [Cucumis melo]

1.6e-104

86.34

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Query:  QITKPCCDVRIGQRSSISTRSHKPNL---SVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVL
        +ITKPCCDVR+GQRSSI TRSHK NL    V+GLTAD +SR WSFITGSRI +KPKL+ VD SK   GV ASWLANAQ+ASNAFTLGT+AVLPFYGLMVL
Subjt:  QITKPCCDVRIGQRSSISTRSHKPNL---SVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVL

Query:  APKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCL
        APKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPET+QLIFASKYWLPELPG+ KMFSSEMTLASAWIHLLVVDLFAARQVFHDG+EN+IETRHSVSLCL
Subjt:  APKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCL

Query:  FFCPIGVLIHVITKALTTRAGPAKHGT
        FFCPIGVLIHVITKALT R GPAKHG+
Subjt:  FFCPIGVLIHVITKALTTRAGPAKHGT

XP_022148183.1 protein ABA DEFICIENT 4, chloroplastic [Momordica charantia]

2.4e-121

99.11

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Query:  QITKPCCDVRIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPK
        +ITKPCCDVRIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPK
Subjt:  QITKPCCDVRIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPK

Query:  SELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFC
        SELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFC
Subjt:  SELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFC

Query:  PIGVLIHVITKALTTRAGPAKHGT
        PIGVLIHVITKALTTR+GPAKHGT
Subjt:  PIGVLIHVITKALTTRAGPAKHGT

XP_022935036.1 protein ABA DEFICIENT 4, chloroplastic [Cucurbita moschata]

4.2e-105

88.16

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Query:  QITKPCCDVRIGQRSSISTRSHKPN---LSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMV
        +ITKPCCDVR+GQRSSISTRS++P+   LSV+ LTADVS   WSFITGSRI +KPKLA VDLSKK   GVHASWLANAQ+ASNAFTLGT+AVLPFYGLMV
Subjt:  QITKPCCDVRIGQRSSISTRSHKPN---LSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMV

Query:  LAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLC
        LAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPEL G+ KMFSSEMTLASAWIHLLVVDLFAARQVFHDG+ENQIETRHSVSLC
Subjt:  LAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLC

Query:  LFFCPIGVLIHVITKALTTRAGPAKHGT
        LFFCPIGVLIHVITKALT R GPAKHGT
Subjt:  LFFCPIGVLIHVITKALTTRAGPAKHGT

XP_022983661.1 protein ABA DEFICIENT 4, chloroplastic [Cucurbita maxima]

2.9e-106

88.6

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Query:  QITKPCCDVRIGQRSSISTRSHKPN---LSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMV
        +ITKPCCDVR+GQRSSISTRS++P+   LSV+ LTADV SR WSFITGSRI +KPKLA VDLSKK H GVHASWLANAQ+ASNAFTLGT+AVLPFYGLMV
Subjt:  QITKPCCDVRIGQRSSISTRSHKPN---LSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMV

Query:  LAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLC
        LAPKSELT+RSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPEL G+ KMFSSEMTLASAWIHLLVVDLFAARQVFHDG+ENQIETRHSVSLC
Subjt:  LAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLC

Query:  LFFCPIGVLIHVITKALTTRAGPAKHGT
        LFFCPIGVLIHVITKALT R GPAKHGT
Subjt:  LFFCPIGVLIHVITKALTTRAGPAKHGT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCH1 FHA domain-containing protein

7.9e-102

84.44

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Query:  QITKPCCDVRIGQRSSISTRSHKPNL---SVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVL
        +I+KPCCDVR+G RSS+ TRSHK NL    V+G TAD +SR WSFITGSRI +KPKL+ V+ SK   GV ASWLANAQ+ASNAFTLGT+AVLPFYGLMVL
Subjt:  QITKPCCDVRIGQRSSISTRSHKPNL---SVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVL

Query:  APKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCL
        APKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPET+QLIFASKYWLPELPG+ KMFSSEMTLASAWIHLLVVDLFAARQVFHDG+EN+IETRHSVSLCL
Subjt:  APKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCL

Query:  FFCPIGVLIHVITKALTTRAGPAKH
        FFCPIGVLIHVITKALT R GPAKH
Subjt:  FFCPIGVLIHVITKALTTRAGPAKH

A0A1S3CFJ8 protein ABA DEFICIENT 4, chloroplastic isoform X2

7.6e-105

86.34

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Query:  QITKPCCDVRIGQRSSISTRSHKPNL---SVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVL
        +ITKPCCDVR+GQRSSI TRSHK NL    V+GLTAD +SR WSFITGSRI +KPKL+ VD SK   GV ASWLANAQ+ASNAFTLGT+AVLPFYGLMVL
Subjt:  QITKPCCDVRIGQRSSISTRSHKPNL---SVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVL

Query:  APKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCL
        APKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPET+QLIFASKYWLPELPG+ KMFSSEMTLASAWIHLLVVDLFAARQVFHDG+EN+IETRHSVSLCL
Subjt:  APKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCL

Query:  FFCPIGVLIHVITKALTTRAGPAKHGT
        FFCPIGVLIHVITKALT R GPAKHG+
Subjt:  FFCPIGVLIHVITKALTTRAGPAKHGT

A0A6J1D387 protein ABA DEFICIENT 4, chloroplastic

1.2e-121

99.11

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Query:  QITKPCCDVRIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPK
        +ITKPCCDVRIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPK
Subjt:  QITKPCCDVRIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPK

Query:  SELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFC
        SELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFC
Subjt:  SELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFC

Query:  PIGVLIHVITKALTTRAGPAKHGT
        PIGVLIHVITKALTTR+GPAKHGT
Subjt:  PIGVLIHVITKALTTRAGPAKHGT

A0A6J1F3F1 protein ABA DEFICIENT 4, chloroplastic

2.0e-105

88.16

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Query:  QITKPCCDVRIGQRSSISTRSHKPN---LSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMV
        +ITKPCCDVR+GQRSSISTRS++P+   LSV+ LTADVS   WSFITGSRI +KPKLA VDLSKK   GVHASWLANAQ+ASNAFTLGT+AVLPFYGLMV
Subjt:  QITKPCCDVRIGQRSSISTRSHKPN---LSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMV

Query:  LAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLC
        LAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPEL G+ KMFSSEMTLASAWIHLLVVDLFAARQVFHDG+ENQIETRHSVSLC
Subjt:  LAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLC

Query:  LFFCPIGVLIHVITKALTTRAGPAKHGT
        LFFCPIGVLIHVITKALT R GPAKHGT
Subjt:  LFFCPIGVLIHVITKALTTRAGPAKHGT

A0A6J1IZZ7 protein ABA DEFICIENT 4, chloroplastic

1.4e-106

88.6

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Query:  QITKPCCDVRIGQRSSISTRSHKPN---LSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMV
        +ITKPCCDVR+GQRSSISTRS++P+   LSV+ LTADV SR WSFITGSRI +KPKLA VDLSKK H GVHASWLANAQ+ASNAFTLGT+AVLPFYGLMV
Subjt:  QITKPCCDVRIGQRSSISTRSHKPN---LSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMV

Query:  LAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLC
        LAPKSELT+RSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPEL G+ KMFSSEMTLASAWIHLLVVDLFAARQVFHDG+ENQIETRHSVSLC
Subjt:  LAPKSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLC

Query:  LFFCPIGVLIHVITKALTTRAGPAKHGT
        LFFCPIGVLIHVITKALT R GPAKHGT
Subjt:  LFFCPIGVLIHVITKALTTRAGPAKHGT

SwissProt top hits

e value

%identity

Alignment

Q5ZEG0 Protein MAO HUZI 4, chloroplastic

6.1e-59

54.42

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Query:  RIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHA------SWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSEL
        R+G  + ++ R  +P +   G     S    +    +R  L+P+LA V          A      +W+A++QIAS+AFT GT+AVLPFY LMV+AP +++
Subjt:  RIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHA------SWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSEL

Query:  TKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIG
        TKR++ S+ PYV LG+LYAYLLYLSWTP+T++ +FASKYWLPEL G+ +MF+SEMT+ASAWIHLL VDLFAARQV+HDG++N IETRHSVSLCL FCPIG
Subjt:  TKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIG

Query:  VLIHVITKALTTRAG
        +  HV+TK L    G
Subjt:  VLIHVITKALTTRAG

Q8LFP9 Protein ABA DEFICIENT 4, chloroplastic

9.7e-65

61.08

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Query:  SSISTRSHKPNLSVNGLTADVS----SRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQS
        SS+S      +   + L  D S      +WSFI GSRI ++     V + KK  GV ASWL   QIAS+ F +GT AVLPFY LMV+APK+E+TK+ M+S
Subjt:  SSISTRSHKPNLSVNGLTADVS----SRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQS

Query:  NIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVIT
        ++PY++LG+LY YLLY+SWTPET++ +F+SKY LPEL G++KMFSSEMTLASAWIHLLVVDLFAARQV++DGLENQIETRHSVSLCL FCP+G++ H +T
Subjt:  NIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVIT

Query:  KAL
        KA+
Subjt:  KAL

Arabidopsis top hits

e value

%identity

Alignment

AT1G67080.1 abscisic acid (aba)-deficient 4

6.9e-66

61.08

Show/hide

Query:  SSISTRSHKPNLSVNGLTADVS----SRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQS
        SS+S      +   + L  D S      +WSFI GSRI ++     V + KK  GV ASWL   QIAS+ F +GT AVLPFY LMV+APK+E+TK+ M+S
Subjt:  SSISTRSHKPNLSVNGLTADVS----SRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQS

Query:  NIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVIT
        ++PY++LG+LY YLLY+SWTPET++ +F+SKY LPEL G++KMFSSEMTLASAWIHLLVVDLFAARQV++DGLENQIETRHSVSLCL FCP+G++ H +T
Subjt:  NIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVIT

Query:  KAL
        KA+
Subjt:  KAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

CAGATTACAAAGCCCTGTTGTGATGTCAGAATTGGCCAAAGATCCTCTATCTCTACAAGAAGCCATAAGCCCAATCTTTCAGTTAATGGTTTGACTGCAGATGTGTCATC
AAGAAAATGGAGTTTCATTACAGGATCAAGGATTCTTCTTAAACCAAAACTTGCAGGAGTAGATTTGTCCAAGAAAGCCCACGGAGTACACGCTTCATGGTTGGCAAATG
CTCAAATTGCTAGCAATGCTTTTACTCTAGGTACAGTAGCTGTTCTCCCATTTTATGGCCTCATGGTTCTGGCTCCAAAATCAGAATTGACTAAGAGGTCTATGCAAAGT
AACATACCATATGTGGTGCTTGGGCTTCTATATGCTTATCTTCTGTACCTTTCTTGGACACCCGAAACCGTGCAGCTTATTTTTGCCAGTAAATACTGGCTGCCTGAGCT
GCCTGGAATGTCAAAGATGTTCTCCAGTGAAATGACATTGGCTTCTGCTTGGATTCACCTGCTGGTTGTGGACCTTTTTGCTGCAAGGCAGGTGTTCCACGATGGACTCG
AGAATCAAATTGAGACCCGACATTCAGTCTCTCTTTGCCTCTTCTTTTGCCCCATAGGAGTTCTCATTCATGTTATCACCAAAGCACTAACCACAAGAGCTGGTCCTGCA
AAACATGGTACA

mRNA sequence

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Protein sequence

Show/hide protein sequence

QITKPCCDVRIGQRSSISTRSHKPNLSVNGLTADVSSRKWSFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPKSELTKRSMQS
NIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTLASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRAGPA
KHGT

MS013208 (gene) of Bitter gourd (TR) v1 genome